; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g29040 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g29040
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr6:21841578..21842774
RNA-Seq ExpressionMoc06g29040
SyntenyMoc06g29040
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]6.6e-13087Show/hide
Query:  GGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSALVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLS
        GGLPAKTD VGQNAPSNEKFEVL+ERLRAIEGTDV GNIDASQLCLVS LVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLS
Subjt:  GGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSALVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLS

Query:  GSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYDRMIRSASTNF
          ASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELS MFINTLKHPFYDRM+ SASTNF
Subjt:  GSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYDRMIRSASTNF

Query:  SDIMTIGERIEYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGADRHSWKQQPYGRTPDTLRIITQRHTGIINH
        SDIM IGERIEYGVRHGRITSTA+EPLAAKK SHSKKKEGE+  V  D     Q PY R  D        HTG I H
Subjt:  SDIMTIGERIEYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGADRHSWKQQPYGRTPDTLRIITQRHTGIINH

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]9.2e-16492.6Show/hide
Query:  MPQYTTYNPLYDVSVGQYPHPFVKGAQQIPTNIIFREPEQMMSPPTVFNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSAL
        MPQYTTYNPLYDV VGQY HPFVKGAQQIPTNIIFREPEQMMSPPTV NLG L AKTD VGQNAPSNEKFEVL+ERLRAIE TDV GNIDASQLC VS L
Subjt:  MPQYTTYNPLYDVSVGQYPHPFVKGAQQIPTNIIFREPEQMMSPPTVFNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSAL

Query:  VIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLSGSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKST
        VIPPK KVPEFEKY+GSSCPKNHL MYCRKMAAYVQNDKLLIHCFQDSLSG ASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKST
Subjt:  VIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLSGSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKST

Query:  ESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYDRMIRSASTNFSDIMTIGERIEYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGADRH
        +SFKEYAQRWRDTAAQVQPPL DKELS+MFINTLKHPFYDRMI SASTNFSDIMTIGERIEYGVRHGRITST +EPLAAKKASHSKKKEGEV+MVGADRH
Subjt:  ESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYDRMIRSASTNFSDIMTIGERIEYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGADRH

Query:  SWKQQPYGRTP
        SWKQQPY RTP
Subjt:  SWKQQPYGRTP

XP_022155098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia]3.3e-16174.94Show/hide
Query:  MMEDQKAEQEKTRKDIEELREKLDVILLALEKGKAAADPATSSNPVHESQETPPYPPGY-------GPPFRPVVEGFMPQYTTYNPLYDVSVGQYPHPFV
        M +D+K+EQEKTRKDIEELREKLD ILLALEKGK  A+   +SNP+HE   TP +PPG+       GP FRP+ EGFM QYTTYNPLYD+  GQ+P P V
Subjt:  MMEDQKAEQEKTRKDIEELREKLDVILLALEKGKAAADPATSSNPVHESQETPPYPPGY-------GPPFRPVVEGFMPQYTTYNPLYDVSVGQYPHPFV

Query:  KGAQQIPTNIIFREPEQMMSPPTVFNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSALVIPPKFKVPEFEKYDGSSCPKNH
        +G  Q P  IIF+EPEQ+++PPTV NLGG  A  D   Q APS+EK EVLEERLRA+EGTDV GNIDASQLCL S LVIPPKFK+PEFEKY+GSSCPKNH
Subjt:  KGAQQIPTNIIFREPEQMMSPPTVFNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSALVIPPKFKVPEFEKYDGSSCPKNH

Query:  LIMYCRKMAAYVQNDKLLIHCFQDSLSGSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTD
        LIMYCRKMAAY+QNDKLLIHCFQDSLSG  S WYM LDS HV SWKNLADSFLKQYKHNIDM  DRLDLQ MEKK+ ESFKEY QRWRDTAAQ QPP TD
Subjt:  LIMYCRKMAAYVQNDKLLIHCFQDSLSGSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTD

Query:  KELSSMFINTLKHPFYDRMIRSASTNFSDIMTIGERIEYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGADRHSWKQQPYGRT
        KELSSMFINTLKHPFYDRMI SAST+FSDI+TIGERIEYGV HGRITST  E    K  + SKKKEGEV+MVGADRH W+Q PYG+T
Subjt:  KELSSMFINTLKHPFYDRMIRSASTNFSDIMTIGERIEYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGADRHSWKQQPYGRT

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]7.0e-18890.74Show/hide
Query:  MEDQKAEQEKTRKDIEELREKLDVILLALEKGKAAADPATSSNPVHESQETPPYPPGYGPPFRPVVEGFMPQYTTYNPLYDVSVGQYPHPFVKGAQQIPT
        MEDQKAEQEKTRKDIEELREKLD I L LEKGKA ADPATSSNP+HE QETPPYPPGYGPP RPV EGFMPQYTTYNPLYDV +GQYPH FVKGAQQIPT
Subjt:  MEDQKAEQEKTRKDIEELREKLDVILLALEKGKAAADPATSSNPVHESQETPPYPPGYGPPFRPVVEGFMPQYTTYNPLYDVSVGQYPHPFVKGAQQIPT

Query:  NIIFREPEQMMSPPTVFNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSALVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKM
        NIIFREPEQMMSPPTV NLGG PAKTD V QNA S EK EVLEERLRAIEGTDV GNIDASQLCLVS LVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKM
Subjt:  NIIFREPEQMMSPPTVFNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSALVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKM

Query:  AAYVQNDKLLIHCFQDSLSGSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELSSMFI
         AYVQN KLLIHCFQDSL G ASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEK STESFKEYAQRWRDTAAQVQPPLTDKELS+MFI
Subjt:  AAYVQNDKLLIHCFQDSLSGSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELSSMFI

Query:  NTLKHPFYDRMIRSASTNFSDIMTIGERIEYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGAD
        NTLKHPFYDRMI SASTNFSDIMTIGERIEYGVRH RITSTA+EPLAAKKASHSKKKEGE+  V  D
Subjt:  NTLKHPFYDRMIRSASTNFSDIMTIGERIEYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGAD

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]1.1e-14595.2Show/hide
Query:  MMSPPTVFNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSALVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKL
        MMSPPTV NLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGT V GNIDASQLCLVS LVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKL
Subjt:  MMSPPTVFNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSALVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKL

Query:  LIHCFQDSLSGSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYD
        LIHCFQDSLSG ASRWYMQLDSS+VGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELS+MFINTLKHPFYD
Subjt:  LIHCFQDSLSGSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYD

Query:  RMIRSASTNFSDIMTIGERIEYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGADRHSWKQQPYGRTP
        RMI +ASTNFSDIMTIGERIEYGVRHGRITST +EPLAAKKASHSKKKEGEV+MVGADRHSWKQQPY RTP
Subjt:  RMIRSASTNFSDIMTIGERIEYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGADRHSWKQQPYGRTP

TrEMBL top hitse value%identityAlignment
A0A6J1CNY7 Ribonuclease H3.2e-13087Show/hide
Query:  GGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSALVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLS
        GGLPAKTD VGQNAPSNEKFEVL+ERLRAIEGTDV GNIDASQLCLVS LVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLS
Subjt:  GGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSALVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLS

Query:  GSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYDRMIRSASTNF
          ASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELS MFINTLKHPFYDRM+ SASTNF
Subjt:  GSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYDRMIRSASTNF

Query:  SDIMTIGERIEYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGADRHSWKQQPYGRTPDTLRIITQRHTGIINH
        SDIM IGERIEYGVRHGRITSTA+EPLAAKK SHSKKKEGE+  V  D     Q PY R  D        HTG I H
Subjt:  SDIMTIGERIEYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGADRHSWKQQPYGRTPDTLRIITQRHTGIINH

A0A6J1D099 Ribonuclease H4.4e-16492.6Show/hide
Query:  MPQYTTYNPLYDVSVGQYPHPFVKGAQQIPTNIIFREPEQMMSPPTVFNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSAL
        MPQYTTYNPLYDV VGQY HPFVKGAQQIPTNIIFREPEQMMSPPTV NLG L AKTD VGQNAPSNEKFEVL+ERLRAIE TDV GNIDASQLC VS L
Subjt:  MPQYTTYNPLYDVSVGQYPHPFVKGAQQIPTNIIFREPEQMMSPPTVFNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSAL

Query:  VIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLSGSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKST
        VIPPK KVPEFEKY+GSSCPKNHL MYCRKMAAYVQNDKLLIHCFQDSLSG ASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKST
Subjt:  VIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLSGSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKST

Query:  ESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYDRMIRSASTNFSDIMTIGERIEYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGADRH
        +SFKEYAQRWRDTAAQVQPPL DKELS+MFINTLKHPFYDRMI SASTNFSDIMTIGERIEYGVRHGRITST +EPLAAKKASHSKKKEGEV+MVGADRH
Subjt:  ESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYDRMIRSASTNFSDIMTIGERIEYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGADRH

Query:  SWKQQPYGRTP
        SWKQQPY RTP
Subjt:  SWKQQPYGRTP

A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222319.2e-16275.19Show/hide
Query:  MMEDQKAEQEKTRKDIEELREKLDVILLALEKGKAAADPATSSNPVHESQETPPYPPGY-------GPPFRPVVEGFMPQYTTYNPLYDVSVGQYPHPFV
        M +D+K+EQEKTRKDIEELREKLD ILLALEKGK  A+   +SNP+HE   TP +PPG+       GP FRP+ EGFM QYTTYNPLYD+  GQ+P P V
Subjt:  MMEDQKAEQEKTRKDIEELREKLDVILLALEKGKAAADPATSSNPVHESQETPPYPPGY-------GPPFRPVVEGFMPQYTTYNPLYDVSVGQYPHPFV

Query:  KGAQQIPTNIIFREPEQMMSPPTVFNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSALVIPPKFKVPEFEKYDGSSCPKNH
        +G  Q P  IIF+EPEQ+++PPTV NLGG  A  D   Q APS+EK EVLEERLRA+EGTDV GNIDASQLCL S LVIPPKFK+PEFEKYDGSSCPKNH
Subjt:  KGAQQIPTNIIFREPEQMMSPPTVFNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSALVIPPKFKVPEFEKYDGSSCPKNH

Query:  LIMYCRKMAAYVQNDKLLIHCFQDSLSGSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTD
        LIMYCRKMAAY+QNDKLLIHCFQDSLSG  S WYM LDS HV SWKNLADSFLKQYKHNIDM  DRLDLQ MEKK+ ESFKEY QRWRDTAAQ QPP TD
Subjt:  LIMYCRKMAAYVQNDKLLIHCFQDSLSGSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTD

Query:  KELSSMFINTLKHPFYDRMIRSASTNFSDIMTIGERIEYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGADRHSWKQQPYGRT
        KELSSMFINTLKHPFYDRMI SAST+FSDI+TIGERIEYGV HGRITST  E    K  + SKKKEGEV+MVGADRH W+Q PYG+T
Subjt:  KELSSMFINTLKHPFYDRMIRSASTNFSDIMTIGERIEYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGADRHSWKQQPYGRT

A0A6J1DZ90 Ribonuclease H3.4e-18890.74Show/hide
Query:  MEDQKAEQEKTRKDIEELREKLDVILLALEKGKAAADPATSSNPVHESQETPPYPPGYGPPFRPVVEGFMPQYTTYNPLYDVSVGQYPHPFVKGAQQIPT
        MEDQKAEQEKTRKDIEELREKLD I L LEKGKA ADPATSSNP+HE QETPPYPPGYGPP RPV EGFMPQYTTYNPLYDV +GQYPH FVKGAQQIPT
Subjt:  MEDQKAEQEKTRKDIEELREKLDVILLALEKGKAAADPATSSNPVHESQETPPYPPGYGPPFRPVVEGFMPQYTTYNPLYDVSVGQYPHPFVKGAQQIPT

Query:  NIIFREPEQMMSPPTVFNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSALVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKM
        NIIFREPEQMMSPPTV NLGG PAKTD V QNA S EK EVLEERLRAIEGTDV GNIDASQLCLVS LVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKM
Subjt:  NIIFREPEQMMSPPTVFNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSALVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKM

Query:  AAYVQNDKLLIHCFQDSLSGSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELSSMFI
         AYVQN KLLIHCFQDSL G ASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEK STESFKEYAQRWRDTAAQVQPPLTDKELS+MFI
Subjt:  AAYVQNDKLLIHCFQDSLSGSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELSSMFI

Query:  NTLKHPFYDRMIRSASTNFSDIMTIGERIEYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGAD
        NTLKHPFYDRMI SASTNFSDIMTIGERIEYGVRH RITSTA+EPLAAKKASHSKKKEGE+  V  D
Subjt:  NTLKHPFYDRMIRSASTNFSDIMTIGERIEYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGAD

A0A6J1E2J7 Ribonuclease H5.4e-14695.2Show/hide
Query:  MMSPPTVFNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSALVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKL
        MMSPPTV NLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGT V GNIDASQLCLVS LVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKL
Subjt:  MMSPPTVFNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSALVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKL

Query:  LIHCFQDSLSGSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYD
        LIHCFQDSLSG ASRWYMQLDSS+VGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELS+MFINTLKHPFYD
Subjt:  LIHCFQDSLSGSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYD

Query:  RMIRSASTNFSDIMTIGERIEYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGADRHSWKQQPYGRTP
        RMI +ASTNFSDIMTIGERIEYGVRHGRITST +EPLAAKKASHSKKKEGEV+MVGADRHSWKQQPY RTP
Subjt:  RMIRSASTNFSDIMTIGERIEYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGADRHSWKQQPYGRTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAAGATCAAAAAGCCGAGCAGGAGAAAACAAGGAAAGATATTGAGGAGTTGCGAGAAAAGTTAGATGTCATCCTCCTCGCGTTGGAAAAAGGCAAAGCAGCTGC
AGATCCTGCTACATCTAGCAACCCTGTCCATGAGTCGCAAGAAACCCCGCCTTATCCACCTGGGTACGGTCCACCTTTTAGGCCAGTGGTAGAGGGTTTCATGCCACAAT
ATACAACGTACAACCCTCTGTATGACGTCTCGGTTGGTCAGTATCCGCATCCCTTTGTTAAAGGAGCTCAGCAAATCCCAACCAACATCATTTTTCGAGAGCCCGAGCAA
ATGATGTCACCCCCTACAGTCTTTAACCTAGGTGGTCTCCCAGCCAAGACAGACCTAGTCGGACAAAATGCCCCCAGTAACGAGAAGTTCGAAGTTCTGGAGGAAAGATT
AAGAGCAATAGAGGGGACAGACGTTTTGGGCAACATCGATGCCTCACAATTGTGTTTGGTGTCTGCTTTAGTCATCCCTCCAAAATTCAAGGTGCCAGAGTTTGAGAAGT
ACGATGGTTCTTCTTGTCCTAAGAATCATCTTATAATGTACTGTAGGAAGATGGCAGCATACGTCCAAAATGACAAATTGTTGATACACTGCTTTCAAGATAGTTTATCT
GGTTCGGCCTCTCGTTGGTACATGCAGTTAGATAGCTCTCATGTTGGCTCGTGGAAGAATCTGGCTGACTCCTTCCTAAAACAATATAAGCATAACATAGACATGGCTCC
AGATCGCTTAGATTTACAGAGGATGGAGAAAAAGAGTACAGAGAGCTTTAAGGAGTATGCTCAAAGGTGGAGGGACACGGCAGCTCAAGTCCAACCTCCTTTAACAGATA
AGGAGCTATCTTCCATGTTCATCAATACCCTAAAACATCCTTTCTATGATCGGATGATAAGAAGCGCTTCCACAAATTTCTCTGATATTATGACCATCGGAGAAAGGATC
GAATACGGGGTTAGACATGGGCGAATAACTAGTACTGCCAATGAGCCATTGGCCGCAAAGAAGGCAAGTCATTCCAAGAAGAAGGAAGGTGAGGTGAAAATGGTGGGAGC
AGACCGACACTCTTGGAAACAACAACCGTACGGTCGGACACCGGATACACTTCGTATTATTACCCAACGCCATACGGGTATAATCAACCATTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGAAGATCAAAAAGCCGAGCAGGAGAAAACAAGGAAAGATATTGAGGAGTTGCGAGAAAAGTTAGATGTCATCCTCCTCGCGTTGGAAAAAGGCAAAGCAGCTGC
AGATCCTGCTACATCTAGCAACCCTGTCCATGAGTCGCAAGAAACCCCGCCTTATCCACCTGGGTACGGTCCACCTTTTAGGCCAGTGGTAGAGGGTTTCATGCCACAAT
ATACAACGTACAACCCTCTGTATGACGTCTCGGTTGGTCAGTATCCGCATCCCTTTGTTAAAGGAGCTCAGCAAATCCCAACCAACATCATTTTTCGAGAGCCCGAGCAA
ATGATGTCACCCCCTACAGTCTTTAACCTAGGTGGTCTCCCAGCCAAGACAGACCTAGTCGGACAAAATGCCCCCAGTAACGAGAAGTTCGAAGTTCTGGAGGAAAGATT
AAGAGCAATAGAGGGGACAGACGTTTTGGGCAACATCGATGCCTCACAATTGTGTTTGGTGTCTGCTTTAGTCATCCCTCCAAAATTCAAGGTGCCAGAGTTTGAGAAGT
ACGATGGTTCTTCTTGTCCTAAGAATCATCTTATAATGTACTGTAGGAAGATGGCAGCATACGTCCAAAATGACAAATTGTTGATACACTGCTTTCAAGATAGTTTATCT
GGTTCGGCCTCTCGTTGGTACATGCAGTTAGATAGCTCTCATGTTGGCTCGTGGAAGAATCTGGCTGACTCCTTCCTAAAACAATATAAGCATAACATAGACATGGCTCC
AGATCGCTTAGATTTACAGAGGATGGAGAAAAAGAGTACAGAGAGCTTTAAGGAGTATGCTCAAAGGTGGAGGGACACGGCAGCTCAAGTCCAACCTCCTTTAACAGATA
AGGAGCTATCTTCCATGTTCATCAATACCCTAAAACATCCTTTCTATGATCGGATGATAAGAAGCGCTTCCACAAATTTCTCTGATATTATGACCATCGGAGAAAGGATC
GAATACGGGGTTAGACATGGGCGAATAACTAGTACTGCCAATGAGCCATTGGCCGCAAAGAAGGCAAGTCATTCCAAGAAGAAGGAAGGTGAGGTGAAAATGGTGGGAGC
AGACCGACACTCTTGGAAACAACAACCGTACGGTCGGACACCGGATACACTTCGTATTATTACCCAACGCCATACGGGTATAATCAACCATTTGTGA
Protein sequenceShow/hide protein sequence
MMEDQKAEQEKTRKDIEELREKLDVILLALEKGKAAADPATSSNPVHESQETPPYPPGYGPPFRPVVEGFMPQYTTYNPLYDVSVGQYPHPFVKGAQQIPTNIIFREPEQ
MMSPPTVFNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTDVLGNIDASQLCLVSALVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLS
GSASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYDRMIRSASTNFSDIMTIGERI
EYGVRHGRITSTANEPLAAKKASHSKKKEGEVKMVGADRHSWKQQPYGRTPDTLRIITQRHTGIINHL