; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g29100 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g29100
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr6:21880589..21881605
RNA-Seq ExpressionMoc06g29100
SyntenyMoc06g29100
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]6.5e-18795.85Show/hide
Query:  MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAI
        MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAW ARRLRQYMLYYTTWLISKMDPIKYIFEK SLS RIAR QVLLSEYDIVY+TQKAI
Subjt:  MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAI

Query:  KGSALVDYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD
        KGSAL DYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDG SNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD
Subjt:  KGSALVDYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD

Query:  MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD
        MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDE+SFDYLPRENNQV DALATLAVMFNLELNEDV PIKVGRRDVPASCMSIEEEPD
Subjt:  MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD

Query:  GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAMTWF
        GNPWFHDIKQYI SKEYPPNASENDKRT RKLAM +F
Subjt:  GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAMTWF

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]1.8e-18996.44Show/hide
Query:  MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAI
        MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSG IARWQVLLSEYDIVY+TQKAI
Subjt:  MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAI

Query:  KGSALVDYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD
        KGSAL DYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDG SNELGHGIGAILISPKGELYPL ARLCFDC HNMAEYEACSMGVQAA+D
Subjt:  KGSALVDYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD

Query:  MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD
        MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQ ITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD
Subjt:  MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD

Query:  GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAMTWF
        G PWFHDIKQYIKSKEYPPNASENDKRTLRKLA+ +F
Subjt:  GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAMTWF

XP_022150030.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111018303 [Momordica charantia]5.9e-18896.44Show/hide
Query:  MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAI
        +GCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAW ARRLRQYMLYYTTWLISKMDPI+YIFEKPSLSGRIARWQVLLSEYDIVY+TQKAI
Subjt:  MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAI

Query:  KGSALVDYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD
        KGSAL DYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDG SNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD
Subjt:  KGSALVDYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD

Query:  MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD
        MKV K KVFGDSMLVIHQLRGEWE RDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDV ASCMSIEEEPD
Subjt:  MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD

Query:  GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAMTWF
        GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAM +F
Subjt:  GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAMTWF

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]5.4e-18996.14Show/hide
Query:  MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAI
        MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAW ARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVY+TQKAI
Subjt:  MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAI

Query:  KGSALVDYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD
        KGSAL DYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDG SNELGH IGAILISPKGELYPLT +LCFDCTHNMAEYEACSMGVQAA+D
Subjt:  KGSALVDYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD

Query:  MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD
        MKVKK KVFGDS LVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD
Subjt:  MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD

Query:  GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAMTWF
        GNPWFHDIKQYIKSKEY PNASENDKRTLRKLAM +F
Subjt:  GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAMTWF

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]4.8e-19096.74Show/hide
Query:  MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAI
        MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWA RRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVY+T+KAI
Subjt:  MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAI

Query:  KGSALVDYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD
        KGSAL DYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDG SNELGHGIG ILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD
Subjt:  KGSALVDYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD

Query:  MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD
        MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDV PIKVGRRDVPASCMSIEEEPD
Subjt:  MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD

Query:  GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAMTWF
        GNPWFH+IK YIKSKEYPPNASENDKRTLRKLAM +F
Subjt:  GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAMTWF

TrEMBL top hitse value%identityAlignment
A0A6J1CNY7 Ribonuclease H3.2e-18795.85Show/hide
Query:  MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAI
        MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAW ARRLRQYMLYYTTWLISKMDPIKYIFEK SLS RIAR QVLLSEYDIVY+TQKAI
Subjt:  MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAI

Query:  KGSALVDYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD
        KGSAL DYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDG SNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD
Subjt:  KGSALVDYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD

Query:  MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD
        MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDE+SFDYLPRENNQV DALATLAVMFNLELNEDV PIKVGRRDVPASCMSIEEEPD
Subjt:  MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD

Query:  GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAMTWF
        GNPWFHDIKQYI SKEYPPNASENDKRT RKLAM +F
Subjt:  GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAMTWF

A0A6J1D099 Ribonuclease H8.9e-19096.44Show/hide
Query:  MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAI
        MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSG IARWQVLLSEYDIVY+TQKAI
Subjt:  MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAI

Query:  KGSALVDYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD
        KGSAL DYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDG SNELGHGIGAILISPKGELYPL ARLCFDC HNMAEYEACSMGVQAA+D
Subjt:  KGSALVDYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD

Query:  MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD
        MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQ ITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD
Subjt:  MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD

Query:  GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAMTWF
        G PWFHDIKQYIKSKEYPPNASENDKRTLRKLA+ +F
Subjt:  GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAMTWF

A0A6J1D7C7 Ribonuclease H2.9e-18896.44Show/hide
Query:  MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAI
        +GCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAW ARRLRQYMLYYTTWLISKMDPI+YIFEKPSLSGRIARWQVLLSEYDIVY+TQKAI
Subjt:  MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAI

Query:  KGSALVDYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD
        KGSAL DYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDG SNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD
Subjt:  KGSALVDYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD

Query:  MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD
        MKV K KVFGDSMLVIHQLRGEWE RDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDV ASCMSIEEEPD
Subjt:  MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD

Query:  GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAMTWF
        GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAM +F
Subjt:  GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAMTWF

A0A6J1DZ90 Ribonuclease H2.6e-18996.14Show/hide
Query:  MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAI
        MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAW ARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVY+TQKAI
Subjt:  MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAI

Query:  KGSALVDYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD
        KGSAL DYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDG SNELGH IGAILISPKGELYPLT +LCFDCTHNMAEYEACSMGVQAA+D
Subjt:  KGSALVDYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD

Query:  MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD
        MKVKK KVFGDS LVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD
Subjt:  MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD

Query:  GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAMTWF
        GNPWFHDIKQYIKSKEY PNASENDKRTLRKLAM +F
Subjt:  GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAMTWF

A0A6J1E2J7 Ribonuclease H2.3e-19096.74Show/hide
Query:  MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAI
        MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWA RRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVY+T+KAI
Subjt:  MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAI

Query:  KGSALVDYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD
        KGSAL DYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDG SNELGHGIG ILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD
Subjt:  KGSALVDYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVD

Query:  MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD
        MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDV PIKVGRRDVPASCMSIEEEPD
Subjt:  MKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPD

Query:  GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAMTWF
        GNPWFH+IK YIKSKEYPPNASENDKRTLRKLAM +F
Subjt:  GNPWFHDIKQYIKSKEYPPNASENDKRTLRKLAMTWF

SwissProt top hitse value%identityAlignment
F9VN79 Ribonuclease HI1.0e-0429.07Show/hide
Query:  THNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLA
        T+N+AEY      ++  + + +    + GDS LVI Q+ GE++ +  +++P  +   EL ++ +  +  ++PRE N+ AD L+ +A
Subjt:  THNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLA

P64956 Uncharacterized protein Mb2253c2.2e-0730.63Show/hide
Query:  THNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLE-LNEDVRP
        T+N+AEY     G+  AV +   +  V  DS LV+ Q+ G W+ +   LL        L+ +F  I+++++PR  N  AD LA  A+    +    D  P
Subjt:  THNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLE-LNEDVRP

Query:  IKVGRRDVPAS
         K+   + P S
Subjt:  IKVGRRDVPAS

P9WLH4 Uncharacterized protein MT22872.2e-0730.63Show/hide
Query:  THNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLE-LNEDVRP
        T+N+AEY     G+  AV +   +  V  DS LV+ Q+ G W+ +   LL        L+ +F  I+++++PR  N  AD LA  A+    +    D  P
Subjt:  THNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLE-LNEDVRP

Query:  IKVGRRDVPAS
         K+   + P S
Subjt:  IKVGRRDVPAS

P9WLH5 Bifunctional protein Rv2228c2.2e-0730.63Show/hide
Query:  THNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLE-LNEDVRP
        T+N+AEY     G+  AV +   +  V  DS LV+ Q+ G W+ +   LL        L+ +F  I+++++PR  N  AD LA  A+    +    D  P
Subjt:  THNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLE-LNEDVRP

Query:  IKVGRRDVPAS
         K+   + P S
Subjt:  IKVGRRDVPAS

Q9HSF6 Ribonuclease HI4.2e-1135.77Show/hide
Query:  FDGTS--NELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFD
        FDG S  N     +G +L+S  G +           T+N AEY+A    ++AA D     +++ GDS LV  QL G W+T D  L   +    EL   FD
Subjt:  FDGTS--NELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFD

Query:  EISFDYLPRENNQVADALATLAV
        + S  ++PR  N+ ADALA  A+
Subjt:  EISFDYLPRENNQVADALATLAV

Arabidopsis top hitse value%identityAlignment
AT1G24090.1 RNase H family protein2.6e-0830.82Show/hide
Query:  PDEYISTITASEESLDPQTWTMMFDGTS--NELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGE
        P E +S +  S    D +T  + FDG S  N    G  A+L +  G L     +     T+N AEY A  +G++ A++   K +KV GDS LV  Q++G+
Subjt:  PDEYISTITASEESLDPQTWTMMFDGTS--NELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGE

Query:  WETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAV
        W+     L    +    L  +       ++ R  N  AD  A LAV
Subjt:  WETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAV

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.9e-0529.66Show/hide
Query:  GIGAILISPKGELYPLTARLCFDCTHNM--AEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGE--WETRDVKLLPYKQLITELSQEFDEISFDYLP
        GIG IL +  G +  + AR     T N+  AE EA    V        K++    D+  +++ L  +  W T    L P  + I +L   F+E+ F++ P
Subjt:  GIGAILISPKGELYPLTARLCFDCTHNM--AEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGE--WETRDVKLLPYKQLITELSQEFDEISFDYLP

Query:  RENNQVADALATLAVMFN
        R  N+VAD +A  ++ F+
Subjt:  RENNQVADALATLAVMFN

AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.0e-1233.33Show/hide
Query:  TMMFDGTS--NELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQ
        T+ FDG S  N    G GA+L +    +         + T+N+AEY A  +G+++A+D   K + V GDSMLV  Q++G W+T   K+    +   EL  
Subjt:  TMMFDGTS--NELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQ

Query:  EFDEISFDYLPRENNQVADALATLAV
         F      ++ RE N  AD  A  A+
Subjt:  EFDEISFDYLPRENNQVADALATLAV

AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.0e-1233.33Show/hide
Query:  TMMFDGTS--NELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQ
        T+ FDG S  N    G GA+L +    +         + T+N+AEY A  +G+++A+D   K + V GDSMLV  Q++G W+T   K+    +   EL  
Subjt:  TMMFDGTS--NELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQ

Query:  EFDEISFDYLPRENNQVADALATLAV
         F      ++ RE N  AD  A  A+
Subjt:  EFDEISFDYLPRENNQVADALATLAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGTGTACTGGGGCAGCATGATGATTCAGGCAGGAAAGAACAGGCTATATATTATTTAAGTAAGAAGTTCACTGATTGCGAGACTAGGTACTCCCAAGTAGAAAA
AACTTGTTGTGCTCTAGCTTGGGCTGCTCGACGTCTAAGACAATACATGTTGTATTATACCACATGGCTCATTTCAAAGATGGACCCCATAAAGTACATTTTTGAAAAGC
CGTCTCTCTCGGGTCGAATTGCAAGGTGGCAGGTCCTCTTGTCCGAATATGATATTGTTTATATGACTCAAAAGGCTATTAAAGGGAGTGCTTTGGTCGACTACCTAGCT
CAACAACCTATAAATGACTACATACCGGTAAAGTTCGATTTTCCAGATGAGTATATCTCCACCATAACTGCAAGTGAGGAAAGTTTAGACCCGCAAACTTGGACCATGAT
GTTTGATGGTACCTCTAACGAGTTAGGTCATGGGATAGGGGCTATTTTGATATCACCCAAAGGGGAACTATACCCTCTTACCGCTAGATTATGTTTTGACTGCACACATA
ATATGGCCGAGTATGAAGCATGCTCGATGGGCGTCCAAGCTGCTGTTGATATGAAGGTTAAGAAACTTAAAGTTTTTGGGGATTCTATGCTAGTAATTCATCAACTAAGA
GGAGAATGGGAAACAAGAGACGTTAAGTTGTTGCCTTATAAACAACTCATAACAGAATTGTCACAAGAATTTGATGAAATCTCATTTGATTATTTGCCAAGAGAAAATAA
TCAAGTAGCAGATGCATTGGCCACATTAGCGGTGATGTTCAATTTAGAACTCAATGAGGATGTCCGTCCGATTAAAGTTGGGAGGAGAGATGTCCCAGCTTCTTGTATGA
GCATTGAGGAAGAACCCGATGGTAACCCCTGGTTTCATGACATCAAGCAATATATAAAGAGTAAAGAGTATCCACCAAATGCTTCAGAAAATGATAAGCGCACCCTTCGC
AAGTTGGCAATGACATGGTTCTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATGTGTACTGGGGCAGCATGATGATTCAGGCAGGAAAGAACAGGCTATATATTATTTAAGTAAGAAGTTCACTGATTGCGAGACTAGGTACTCCCAAGTAGAAAA
AACTTGTTGTGCTCTAGCTTGGGCTGCTCGACGTCTAAGACAATACATGTTGTATTATACCACATGGCTCATTTCAAAGATGGACCCCATAAAGTACATTTTTGAAAAGC
CGTCTCTCTCGGGTCGAATTGCAAGGTGGCAGGTCCTCTTGTCCGAATATGATATTGTTTATATGACTCAAAAGGCTATTAAAGGGAGTGCTTTGGTCGACTACCTAGCT
CAACAACCTATAAATGACTACATACCGGTAAAGTTCGATTTTCCAGATGAGTATATCTCCACCATAACTGCAAGTGAGGAAAGTTTAGACCCGCAAACTTGGACCATGAT
GTTTGATGGTACCTCTAACGAGTTAGGTCATGGGATAGGGGCTATTTTGATATCACCCAAAGGGGAACTATACCCTCTTACCGCTAGATTATGTTTTGACTGCACACATA
ATATGGCCGAGTATGAAGCATGCTCGATGGGCGTCCAAGCTGCTGTTGATATGAAGGTTAAGAAACTTAAAGTTTTTGGGGATTCTATGCTAGTAATTCATCAACTAAGA
GGAGAATGGGAAACAAGAGACGTTAAGTTGTTGCCTTATAAACAACTCATAACAGAATTGTCACAAGAATTTGATGAAATCTCATTTGATTATTTGCCAAGAGAAAATAA
TCAAGTAGCAGATGCATTGGCCACATTAGCGGTGATGTTCAATTTAGAACTCAATGAGGATGTCCGTCCGATTAAAGTTGGGAGGAGAGATGTCCCAGCTTCTTGTATGA
GCATTGAGGAAGAACCCGATGGTAACCCCTGGTTTCATGACATCAAGCAATATATAAAGAGTAAAGAGTATCCACCAAATGCTTCAGAAAATGATAAGCGCACCCTTCGC
AAGTTGGCAATGACATGGTTCTCCTAA
Protein sequenceShow/hide protein sequence
MGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWAARRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYMTQKAIKGSALVDYLA
QQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGTSNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLR
GEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIKSKEYPPNASENDKRTLR
KLAMTWFS