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Moc06g29200 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g29200
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA-directed DNA polymerase
Genome locationchr6:21956514..21960209
RNA-Seq ExpressionMoc06g29200
SyntenyMoc06g29200
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151603.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111019515 [Momordica charantia]9.4e-1790.91Show/hide
Query:  EIEEELDKMAEGPEDVINPVEKIQKEECKSLLPSIVEPPTLEQKSLPSHLKYARL
        EIEEELDK+AEGPEDV +PVEKIQKEECKSLLPSIVEPPTLEQK LPSHLKYA L
Subjt:  EIEEELDKMAEGPEDVINPVEKIQKEECKSLLPSIVEPPTLEQKSLPSHLKYARL

XP_022159336.1 uncharacterized protein LOC111025754, partial [Momordica charantia]6.9e-1273.08Show/hide
Query:  MKLPGDFEECSAINSLNPVMFDEFYDLLVTEIEEELDKMAEGPEDVINPVEK
        MKLPGDFEECSAI +LNPVMFDEFYDLLV EIE+E DK+AEGP++++   +K
Subjt:  MKLPGDFEECSAINSLNPVMFDEFYDLLVTEIEEELDKMAEGPEDVINPVEK

XP_030485610.1 uncharacterized protein LOC115702304 [Cannabis sativa]5.1e-0737.5Show/hide
Query:  MRVNNEEVKFNVLDAMKLPGDFEECSAINSLNPVMFDEFY-----DLLVTEIEEELDKMAEGPEDVINPVEKIQ-----KEECKSL----------LPSI
        MRVN+++V FNV +AM+   + EECS ++ ++ ++ + F+     D  V    E+L+ ++E  E  +  VE +Q     K   +SL           PSI
Subjt:  MRVNNEEVKFNVLDAMKLPGDFEECSAINSLNPVMFDEFY-----DLLVTEIEEELDKMAEGPEDVINPVEKIQ-----KEECKSL----------LPSI

Query:  VEPPTLEQKSLPSHLKYARLAPALCENE
         EPP LE K LPSHLKYA L     ENE
Subjt:  VEPPTLEQKSLPSHLKYARLAPALCENE

XP_030504461.1 uncharacterized protein LOC115719521 [Cannabis sativa]4.2e-0937.21Show/hide
Query:  MRVNNEEVKFNVLDAMKLPGDFEECSAINSLNPVMFDEFY-----DLLVTEIEEELDKMAEGPEDVINPVEKIQ---------------KEECKSLLPSI
        MRVN+++V FNV +AM+ P + EECS ++ ++ ++ + F+     D  V    E+L+ ++E  E  ++ VE +Q               +   K L PSI
Subjt:  MRVNNEEVKFNVLDAMKLPGDFEECSAINSLNPVMFDEFY-----DLLVTEIEEELDKMAEGPEDVINPVEKIQ---------------KEECKSLLPSI

Query:  VEPPTLEQKSLPSHLKYARLAPALCENES
         EPP LE K LPSHLKYA L     ENE+
Subjt:  VEPPTLEQKSLPSHLKYARLAPALCENES

XP_030504924.1 uncharacterized protein LOC115719886 [Cannabis sativa]1.8e-0737.5Show/hide
Query:  MRVNNEEVKFNVLDAMKLPGDFEECSAINSLNPVMFDEFY-----DLLVTEIEEELDKMAEGPEDVINPVEKIQ-----KEECKSL----------LPSI
        MRVN+++V FNV +AM+ P + EECS I+ ++ ++ ++F+     D       +EL+ ++E  ++ +  VE +Q     K+  +SL           PSI
Subjt:  MRVNNEEVKFNVLDAMKLPGDFEECSAINSLNPVMFDEFY-----DLLVTEIEEELDKMAEGPEDVINPVEKIQ-----KEECKSL----------LPSI

Query:  VEPPTLEQKSLPSHLKYARL
         EPP LE K LPSHLKYA L
Subjt:  VEPPTLEQKSLPSHLKYARL

TrEMBL top hitse value%identityAlignment
A0A2G9GK35 Reverse transcriptase1.4e-0536.75Show/hide
Query:  MRVNNEEVKFNVLDAMKLPGDFEECSAINSL-----NPVMFDEFYDLLVTEIEEELDKMAEGPEDVINP-----------VEKIQK-EECKSLLPSIVEP
        MRV ++++ FNV  AMK P + +EC A+N       N  + ++  D L   + + LD+  E   +V+             VE +++    K L PSI EP
Subjt:  MRVNNEEVKFNVLDAMKLPGDFEECSAINSL-----NPVMFDEFYDLLVTEIEEELDKMAEGPEDVINP-----------VEKIQK-EECKSLLPSIVEP

Query:  PTLEQKSLPSHLKYARL
        PTLE K LPSHL YA L
Subjt:  PTLEQKSLPSHLKYARL

A0A5B6WSB5 RNA-directed DNA polymerase-like protein2.1e-0636.08Show/hide
Query:  MRVNNEEVKFNVLDAMKLPGDFEECSAINSLNPVMFDEFYDLLVTEIEEELDKMAEGPEDVINPVEKIQKEECKSLLPSIVEPPTLEQKSLPSHLKY
        MRVN++++ FN+ DAMK   + EEC AI  L   + +EF  L     +++ D       ++I  +  + + +     PSI +P TLE K LP HLKY
Subjt:  MRVNNEEVKFNVLDAMKLPGDFEECSAINSLNPVMFDEFYDLLVTEIEEELDKMAEGPEDVINPVEKIQKEECKSLLPSIVEPPTLEQKSLPSHLKY

A0A6J1D9S6 uncharacterized protein LOC1110183579.5e-0743.66Show/hide
Query:  MRVNNEEVKFNVLDAMKLPGDFEECSAINSLNPVMFDEFYDLLVTEIEEELD--KMAEGPEDVINPVEKIQ
        M+VN+E+V FNVLDAM+LP + EECS I   N V  +EF DL++  +E+EL+  +     +  ++P+EK +
Subjt:  MRVNNEEVKFNVLDAMKLPGDFEECSAINSLNPVMFDEFYDLLVTEIEEELD--KMAEGPEDVINPVEKIQ

A0A6J1DCL7 LOW QUALITY PROTEIN: uncharacterized protein LOC1110195154.5e-1790.91Show/hide
Query:  EIEEELDKMAEGPEDVINPVEKIQKEECKSLLPSIVEPPTLEQKSLPSHLKYARL
        EIEEELDK+AEGPEDV +PVEKIQKEECKSLLPSIVEPPTLEQK LPSHLKYA L
Subjt:  EIEEELDKMAEGPEDVINPVEKIQKEECKSLLPSIVEPPTLEQKSLPSHLKYARL

A0A6J1E3L7 uncharacterized protein LOC1110257543.4e-1273.08Show/hide
Query:  MKLPGDFEECSAINSLNPVMFDEFYDLLVTEIEEELDKMAEGPEDVINPVEK
        MKLPGDFEECSAI +LNPVMFDEFYDLLV EIE+E DK+AEGP++++   +K
Subjt:  MKLPGDFEECSAINSLNPVMFDEFYDLLVTEIEEELDKMAEGPEDVINPVEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGTAAATAATGAAGAAGTTAAATTTAACGTTCTAGACGCCATGAAATTACCAGGAGACTTTGAAGAATGCTCTGCTATAAATAGCTTGAATCCTGTTATGTTTGA
TGAGTTTTATGACTTGTTAGTTACAGAGATTGAAGAAGAGCTTGATAAGATGGCAGAAGGACCGGAAGATGTGATTAATCCTGTTGAAAAAATACAAAAAGAAGAATGCA
AGTCGTTACTTCCGTCCATAGTGGAACCACCCACGTTGGAGCAGAAGTCATTGCCGTCGCATTTGAAATATGCGCGCCTGGCGCCTGCCCTTTGCGAAAATGAATCACGC
AAGCGCCTGGCGCCTGCCCTGTTTTTTCCAGCATTTCGAAAAATATTAGGGAATGTTCCAATTGTGGAAGAGAAGAATATTCGGAGAATTATCGCACATGCGTTACAAAG
AAAGGAAGGTACTGGGATGTCTCCTACATCGGAGATCCGTCGTCTCCGAAAGGAGAACCAACAGCTGCGAGATCAGGTTCGAGAAGTCGTGCAACATATCTACAACTTGA
GGGCTTCATTGGATTTTGCGGTTTTACCTTCATGGCCTCCAGCGCTAGCTGCTATCCTTGGTCATCCATCTTCCAGTACCGACACTGATCCTAGTCCACAACCTCCGACT
TCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGTAAATAATGAAGAAGTTAAATTTAACGTTCTAGACGCCATGAAATTACCAGGAGACTTTGAAGAATGCTCTGCTATAAATAGCTTGAATCCTGTTATGTTTGA
TGAGTTTTATGACTTGTTAGTTACAGAGATTGAAGAAGAGCTTGATAAGATGGCAGAAGGACCGGAAGATGTGATTAATCCTGTTGAAAAAATACAAAAAGAAGAATGCA
AGTCGTTACTTCCGTCCATAGTGGAACCACCCACGTTGGAGCAGAAGTCATTGCCGTCGCATTTGAAATATGCGCGCCTGGCGCCTGCCCTTTGCGAAAATGAATCACGC
AAGCGCCTGGCGCCTGCCCTGTTTTTTCCAGCATTTCGAAAAATATTAGGGAATGTTCCAATTGTGGAAGAGAAGAATATTCGGAGAATTATCGCACATGCGTTACAAAG
AAAGGAAGGTACTGGGATGTCTCCTACATCGGAGATCCGTCGTCTCCGAAAGGAGAACCAACAGCTGCGAGATCAGGTTCGAGAAGTCGTGCAACATATCTACAACTTGA
GGGCTTCATTGGATTTTGCGGTTTTACCTTCATGGCCTCCAGCGCTAGCTGCTATCCTTGGTCATCCATCTTCCAGTACCGACACTGATCCTAGTCCACAACCTCCGACT
TCATGA
Protein sequenceShow/hide protein sequence
MRVNNEEVKFNVLDAMKLPGDFEECSAINSLNPVMFDEFYDLLVTEIEEELDKMAEGPEDVINPVEKIQKEECKSLLPSIVEPPTLEQKSLPSHLKYARLAPALCENESR
KRLAPALFFPAFRKILGNVPIVEEKNIRRIIAHALQRKEGTGMSPTSEIRRLRKENQQLRDQVREVVQHIYNLRASLDFAVLPSWPPALAAILGHPSSSTDTDPSPQPPT
S