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Moc06g29290 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g29290
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationchr6:22046425..22048918
RNA-Seq ExpressionMoc06g29290
SyntenyMoc06g29290
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141932.1 uncharacterized protein LOC111012188 [Momordica charantia]1.0e-2037.79Show/hide
Query:  INMKSHDARVNKESSSDKKLGGVSKFYLRKNQSLEEKGAALDEEIARLHERAEMCNKNKEIRDKENESVYAKIEELNIKWQEFMENSKKVKYDTEPLEHS
        + ++ H AR+N+   ++KKL   SK YLRKNQ + + G+ LDE I  ++ER +  NK  EIRDKENE + AKI ELN KWQ FMENS+++          
Subjt:  INMKSHDARVNKESSSDKKLGGVSKFYLRKNQSLEEKGAALDEEIARLHERAEMCNKNKEIRDKENESVYAKIEELNIKWQEFMENSKKVKYDTEPLEHS

Query:  DSATVEIQCQIALGTIMDETPPATLQVHGDEFKEEEDNDNVFQY-EVRVRTPVHESQQDDEEPP------------------VQHLNVSDPNFVATAETS
               + QI L  + DE      Q   +E +EEE+N+++ QY E      V E     ++ P                     LNV DPNFVA AE S
Subjt:  DSATVEIQCQIALGTIMDETPPATLQVHGDEFKEEEDNDNVFQY-EVRVRTPVHESQQDDEEPP------------------VQHLNVSDPNFVATAETS

Query:  DEEVRLTKVVKKTQKNK
        +EE  LTK  K+  + K
Subjt:  DEEVRLTKVVKKTQKNK

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]1.4e-3833.83Show/hide
Query:  QVHGDEFKEEEDNDNVFQYEVRVRTPVHESQQDDEEPPVQHLNVSDPNFVATAETSDEEVRLTK--VVKKTQKNKKVAEIAPGSILDLGPEPLYHVWLPK
        +VHGDEF++EEDND++ QYEV+VRTPVHESQQ DEEPP +    +       +E  +E    +    V + +    VA +A     + G         P 
Subjt:  QVHGDEFKEEEDNDNVFQYEVRVRTPVHESQQDDEEPPVQHLNVSDPNFVATAETSDEEVRLTK--VVKKTQKNKKVAEIAPGSILDLGPEPLYHVWLPK

Query:  KKPRLVHLDKPRGLGCLEGAEEPLEEANEEEPDYTKQTLSRVKKVRLE----------------------------------------------------
        KK +   + +         AEEPLEEANEEEPD T+QT SRVK+VRLE                                                    
Subjt:  KKPRLVHLDKPRGLGCLEGAEEPLEEANEEEPDYTKQTLSRVKKVRLE----------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------AGAEADDANVVTPKKPFTSVRRVRGYSIVREEDSPITAADPDTRGVVTREQYDELRHKYELVLATQHATCAFLKKIYSDEA
                          AG EA DANVV PKKPF S+R+VRGYSIVREEDSPITAADP+TRGVVTREQYDELRHKYEL+L TQ ATCAFLKKIY DEA
Subjt:  ------------------AGAEADDANVVTPKKPFTSVRRVRGYSIVREEDSPITAADPDTRGVVTREQYDELRHKYELVLATQHATCAFLKKIYSDEA

XP_022156935.1 uncharacterized protein LOC111023761 [Momordica charantia]1.1e-2248.43Show/hide
Query:  EFMENSKKVKYDTEPLEHSDSATVEIQCQIALGTIMDETPPATLQ--------------VHGDEFKEEEDNDNVFQYEVRVRTPVHESQQDDEE------
        ++ E S   ++D EPLEHSDSATV+I+CQIA  TIM ETPPATLQ              +  D    ++D + + Q +     P+    +  EE      
Subjt:  EFMENSKKVKYDTEPLEHSDSATVEIQCQIALGTIMDETPPATLQ--------------VHGDEFKEEEDNDNVFQYEVRVRTPVHESQQDDEE------

Query:  ----PPVQHLNVSDPNFVATAETSDEEVRLTKVVKKTQKNKKVAEIAPGSILDLGPEPL
              +  LNVSDPNFVATAE SDEEV L KVVKKTQK KKVAEI P   L LGPEPL
Subjt:  ----PPVQHLNVSDPNFVATAETSDEEVRLTKVVKKTQKNKKVAEIAPGSILDLGPEPL

XP_022158483.1 uncharacterized protein LOC111024964 [Momordica charantia]2.1e-4235.4Show/hide
Query:  MEGSSSSKPHDEENENKKVLLPPPTKLGMIPLEPPRISHEKLVFDPREQRRKYEEAIRMNPKRNLSVGGTNSEEINMKSHDARVNKESSSDKKLGGVSKF
        MEGSS SKP D+ENE KKV+LPPP     IP EP                                             H ARVN+   S+KKL G SK 
Subjt:  MEGSSSSKPHDEENENKKVLLPPPTKLGMIPLEPPRISHEKLVFDPREQRRKYEEAIRMNPKRNLSVGGTNSEEINMKSHDARVNKESSSDKKLGGVSKF

Query:  YLRKNQSLEEKGAALDEEIARLHERAEMCNKNKEIRDKENESVYAKIEELNIKWQEFMENSKKVKYDTE-PLEHSDSATVEI-QCQIALGTIMDETP---
        YLRKNQS+ +K + LDE IAR++E+ ++ NK +EI DK+NE + AKI ELN KWQ FMENS+++  + +  L   +  T +I +  +AL     E P   
Subjt:  YLRKNQSLEEKGAALDEEIARLHERAEMCNKNKEIRDKENESVYAKIEELNIKWQEFMENSKKVKYDTE-PLEHSDSATVEI-QCQIALGTIMDETP---

Query:  ---------------------PATLQVHGDEFKEEEDNDNVFQYEVRVRTPVHESQQDDEEPPVQ-HLNVSDPNFVATAETSDEEVRLTKVVKKTQKNKK
                                 +VHGDE +EEE+ND++ QYEVR+   VHESQ+D  E P++ H   SDP  V    T       +K          
Subjt:  ---------------------PATLQVHGDEFKEEEDNDNVFQYEVRVRTPVHESQQDDEEPPVQ-HLNVSDPNFVATAETSDEEVRLTKVVKKTQKNKK

Query:  VAEIAPGSILDLGPEPLYHVWLPKKKPRLVHLDKPRGLGCLEGAEEPLEEANEEEPDYTKQTLSRVKKVRLEA--------------------GAEADDA
                                                    +   EE NEEEP  T+Q  S+ K+V LEA                    G +A+D 
Subjt:  VAEIAPGSILDLGPEPLYHVWLPKKKPRLVHLDKPRGLGCLEGAEEPLEEANEEEPDYTKQTLSRVKKVRLEA--------------------GAEADDA

Query:  NVVTPKKPFTSVRRVRGYSIVREEDSPITAADPDT
        +VVTPKK  TS+RRVRGY IVREEDS IT ADP+T
Subjt:  NVVTPKKPFTSVRRVRGYSIVREEDSPITAADPDT

XP_022159289.1 uncharacterized protein LOC111025702 [Momordica charantia]5.2e-2569.89Show/hide
Query:  SRVKKVRLEAGAEADDANVVTPKKPFTSVRRVRGYSIVREEDSPITAADPDTRGVVTREQYDE---LRHKYELVLATQHATCAFLKKIYSDEA
        +R+ ++ L+AG EAD  +VV  KK  TS+RRVRGY IVREEDSPITAADPDTRGVVTREQYDE   LRH Y+L+ ATQHATC FLKK+Y D A
Subjt:  SRVKKVRLEAGAEADDANVVTPKKPFTSVRRVRGYSIVREEDSPITAADPDTRGVVTREQYDE---LRHKYELVLATQHATCAFLKKIYSDEA

TrEMBL top hitse value%identityAlignment
A0A6J1CL76 uncharacterized protein LOC1110121884.9e-2137.79Show/hide
Query:  INMKSHDARVNKESSSDKKLGGVSKFYLRKNQSLEEKGAALDEEIARLHERAEMCNKNKEIRDKENESVYAKIEELNIKWQEFMENSKKVKYDTEPLEHS
        + ++ H AR+N+   ++KKL   SK YLRKNQ + + G+ LDE I  ++ER +  NK  EIRDKENE + AKI ELN KWQ FMENS+++          
Subjt:  INMKSHDARVNKESSSDKKLGGVSKFYLRKNQSLEEKGAALDEEIARLHERAEMCNKNKEIRDKENESVYAKIEELNIKWQEFMENSKKVKYDTEPLEHS

Query:  DSATVEIQCQIALGTIMDETPPATLQVHGDEFKEEEDNDNVFQY-EVRVRTPVHESQQDDEEPP------------------VQHLNVSDPNFVATAETS
               + QI L  + DE      Q   +E +EEE+N+++ QY E      V E     ++ P                     LNV DPNFVA AE S
Subjt:  DSATVEIQCQIALGTIMDETPPATLQVHGDEFKEEEDNDNVFQY-EVRVRTPVHESQQDDEEPP------------------VQHLNVSDPNFVATAETS

Query:  DEEVRLTKVVKKTQKNK
        +EE  LTK  K+  + K
Subjt:  DEEVRLTKVVKKTQKNK

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220076.8e-3933.83Show/hide
Query:  QVHGDEFKEEEDNDNVFQYEVRVRTPVHESQQDDEEPPVQHLNVSDPNFVATAETSDEEVRLTK--VVKKTQKNKKVAEIAPGSILDLGPEPLYHVWLPK
        +VHGDEF++EEDND++ QYEV+VRTPVHESQQ DEEPP +    +       +E  +E    +    V + +    VA +A     + G         P 
Subjt:  QVHGDEFKEEEDNDNVFQYEVRVRTPVHESQQDDEEPPVQHLNVSDPNFVATAETSDEEVRLTK--VVKKTQKNKKVAEIAPGSILDLGPEPLYHVWLPK

Query:  KKPRLVHLDKPRGLGCLEGAEEPLEEANEEEPDYTKQTLSRVKKVRLE----------------------------------------------------
        KK +   + +         AEEPLEEANEEEPD T+QT SRVK+VRLE                                                    
Subjt:  KKPRLVHLDKPRGLGCLEGAEEPLEEANEEEPDYTKQTLSRVKKVRLE----------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------AGAEADDANVVTPKKPFTSVRRVRGYSIVREEDSPITAADPDTRGVVTREQYDELRHKYELVLATQHATCAFLKKIYSDEA
                          AG EA DANVV PKKPF S+R+VRGYSIVREEDSPITAADP+TRGVVTREQYDELRHKYEL+L TQ ATCAFLKKIY DEA
Subjt:  ------------------AGAEADDANVVTPKKPFTSVRRVRGYSIVREEDSPITAADPDTRGVVTREQYDELRHKYELVLATQHATCAFLKKIYSDEA

A0A6J1DRR9 uncharacterized protein LOC1110237615.3e-2348.43Show/hide
Query:  EFMENSKKVKYDTEPLEHSDSATVEIQCQIALGTIMDETPPATLQ--------------VHGDEFKEEEDNDNVFQYEVRVRTPVHESQQDDEE------
        ++ E S   ++D EPLEHSDSATV+I+CQIA  TIM ETPPATLQ              +  D    ++D + + Q +     P+    +  EE      
Subjt:  EFMENSKKVKYDTEPLEHSDSATVEIQCQIALGTIMDETPPATLQ--------------VHGDEFKEEEDNDNVFQYEVRVRTPVHESQQDDEE------

Query:  ----PPVQHLNVSDPNFVATAETSDEEVRLTKVVKKTQKNKKVAEIAPGSILDLGPEPL
              +  LNVSDPNFVATAE SDEEV L KVVKKTQK KKVAEI P   L LGPEPL
Subjt:  ----PPVQHLNVSDPNFVATAETSDEEVRLTKVVKKTQKNKKVAEIAPGSILDLGPEPL

A0A6J1DW79 uncharacterized protein LOC1110249641.0e-4235.4Show/hide
Query:  MEGSSSSKPHDEENENKKVLLPPPTKLGMIPLEPPRISHEKLVFDPREQRRKYEEAIRMNPKRNLSVGGTNSEEINMKSHDARVNKESSSDKKLGGVSKF
        MEGSS SKP D+ENE KKV+LPPP     IP EP                                             H ARVN+   S+KKL G SK 
Subjt:  MEGSSSSKPHDEENENKKVLLPPPTKLGMIPLEPPRISHEKLVFDPREQRRKYEEAIRMNPKRNLSVGGTNSEEINMKSHDARVNKESSSDKKLGGVSKF

Query:  YLRKNQSLEEKGAALDEEIARLHERAEMCNKNKEIRDKENESVYAKIEELNIKWQEFMENSKKVKYDTE-PLEHSDSATVEI-QCQIALGTIMDETP---
        YLRKNQS+ +K + LDE IAR++E+ ++ NK +EI DK+NE + AKI ELN KWQ FMENS+++  + +  L   +  T +I +  +AL     E P   
Subjt:  YLRKNQSLEEKGAALDEEIARLHERAEMCNKNKEIRDKENESVYAKIEELNIKWQEFMENSKKVKYDTE-PLEHSDSATVEI-QCQIALGTIMDETP---

Query:  ---------------------PATLQVHGDEFKEEEDNDNVFQYEVRVRTPVHESQQDDEEPPVQ-HLNVSDPNFVATAETSDEEVRLTKVVKKTQKNKK
                                 +VHGDE +EEE+ND++ QYEVR+   VHESQ+D  E P++ H   SDP  V    T       +K          
Subjt:  ---------------------PATLQVHGDEFKEEEDNDNVFQYEVRVRTPVHESQQDDEEPPVQ-HLNVSDPNFVATAETSDEEVRLTKVVKKTQKNKK

Query:  VAEIAPGSILDLGPEPLYHVWLPKKKPRLVHLDKPRGLGCLEGAEEPLEEANEEEPDYTKQTLSRVKKVRLEA--------------------GAEADDA
                                                    +   EE NEEEP  T+Q  S+ K+V LEA                    G +A+D 
Subjt:  VAEIAPGSILDLGPEPLYHVWLPKKKPRLVHLDKPRGLGCLEGAEEPLEEANEEEPDYTKQTLSRVKKVRLEA--------------------GAEADDA

Query:  NVVTPKKPFTSVRRVRGYSIVREEDSPITAADPDT
        +VVTPKK  TS+RRVRGY IVREEDS IT ADP+T
Subjt:  NVVTPKKPFTSVRRVRGYSIVREEDSPITAADPDT

A0A6J1E204 uncharacterized protein LOC1110257022.5e-2569.89Show/hide
Query:  SRVKKVRLEAGAEADDANVVTPKKPFTSVRRVRGYSIVREEDSPITAADPDTRGVVTREQYDE---LRHKYELVLATQHATCAFLKKIYSDEA
        +R+ ++ L+AG EAD  +VV  KK  TS+RRVRGY IVREEDSPITAADPDTRGVVTREQYDE   LRH Y+L+ ATQHATC FLKK+Y D A
Subjt:  SRVKKVRLEAGAEADDANVVTPKKPFTSVRRVRGYSIVREEDSPITAADPDTRGVVTREQYDE---LRHKYELVLATQHATCAFLKKIYSDEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGTTCATCTTCCTCCAAGCCACACGACGAAGAGAATGAGAATAAGAAAGTGTTGTTGCCTCCACCAACTAAACTGGGTATGATTCCTCTTGAACCTCCTAGGAT
TTCTCATGAAAAGCTAGTTTTTGATCCTAGGGAACAAAGAAGAAAATATGAGGAAGCTATAAGAATGAACCCTAAGAGAAATCTATCCGTAGGTGGTACAAATTCTGAAG
AAATCAATATGAAATCTCATGATGCTAGGGTTAATAAAGAAAGTTCTAGTGACAAGAAATTAGGAGGAGTTAGTAAATTCTATCTTCGGAAAAATCAATCTTTAGAGGAA
AAAGGTGCTGCATTAGATGAAGAAATCGCTAGACTTCATGAGAGAGCGGAGATGTGCAATAAAAATAAAGAAATTAGAGATAAAGAGAATGAGAGCGTTTATGCGAAAAT
TGAGGAATTAAACATAAAATGGCAAGAATTCATGGAAAACTCAAAGAAAGTGAAATACGACACGGAGCCCTTGGAGCATTCAGATTCGGCCACGGTCGAAATTCAGTGCC
AAATTGCGCTTGGCACAATTATGGATGAGACTCCACCGGCCACTCTACAAGTGCATGGAGATGAGTTTAAAGAGGAAGAAGACAATGACAATGTCTTTCAATATGAAGTG
AGAGTACGAACTCCGGTGCACGAATCTCAGCAAGATGATGAGGAGCCCCCTGTACAACATTTGAATGTTTCTGACCCAAATTTTGTCGCTACTGCAGAGACTTCAGATGA
GGAGGTGAGGTTGACCAAAGTGGTGAAGAAAACACAAAAGAATAAGAAAGTGGCAGAAATTGCGCCTGGGTCAATTCTAGACCTAGGACCTGAGCCGCTGTACCACGTTT
GGCTGCCCAAAAAGAAGCCGAGGCTGGTCCATCTAGACAAGCCAAGAGGGCTAGGGTGCCTAGAGGGCGCAGAAGAGCCACTTGAGGAGGCCAATGAAGAGGAGCCTGAT
TATACCAAACAAACACTATCAAGAGTAAAAAAAGTGAGATTGGAGGCGGGAGCGGAGGCCGATGATGCCAATGTTGTGACGCCCAAGAAGCCGTTCACATCCGTTAGGAG
AGTTCGGGGGTATTCCATTGTTCGAGAGGAAGATTCTCCAATTACCGCTGCGGATCCCGATACCCGAGGGGTGGTGACTAGGGAGCAATATGATGAGCTTCGGCATAAGT
ACGAGCTTGTTTTGGCTACTCAACATGCCACTTGTGCTTTCCTTAAGAAGATATACAGTGATGAAGCTCACCTTCATTCCCCGATGAGCTTGCGGCTGATTTACCATCAT
CTTCCCGTCTTCCTACCTATTCCACCGATGATGAGTCTTTCGATGATGAATAGAGGAGTATCTCCCTCTCTTTGCTTTGATATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGTTCATCTTCCTCCAAGCCACACGACGAAGAGAATGAGAATAAGAAAGTGTTGTTGCCTCCACCAACTAAACTGGGTATGATTCCTCTTGAACCTCCTAGGAT
TTCTCATGAAAAGCTAGTTTTTGATCCTAGGGAACAAAGAAGAAAATATGAGGAAGCTATAAGAATGAACCCTAAGAGAAATCTATCCGTAGGTGGTACAAATTCTGAAG
AAATCAATATGAAATCTCATGATGCTAGGGTTAATAAAGAAAGTTCTAGTGACAAGAAATTAGGAGGAGTTAGTAAATTCTATCTTCGGAAAAATCAATCTTTAGAGGAA
AAAGGTGCTGCATTAGATGAAGAAATCGCTAGACTTCATGAGAGAGCGGAGATGTGCAATAAAAATAAAGAAATTAGAGATAAAGAGAATGAGAGCGTTTATGCGAAAAT
TGAGGAATTAAACATAAAATGGCAAGAATTCATGGAAAACTCAAAGAAAGTGAAATACGACACGGAGCCCTTGGAGCATTCAGATTCGGCCACGGTCGAAATTCAGTGCC
AAATTGCGCTTGGCACAATTATGGATGAGACTCCACCGGCCACTCTACAAGTGCATGGAGATGAGTTTAAAGAGGAAGAAGACAATGACAATGTCTTTCAATATGAAGTG
AGAGTACGAACTCCGGTGCACGAATCTCAGCAAGATGATGAGGAGCCCCCTGTACAACATTTGAATGTTTCTGACCCAAATTTTGTCGCTACTGCAGAGACTTCAGATGA
GGAGGTGAGGTTGACCAAAGTGGTGAAGAAAACACAAAAGAATAAGAAAGTGGCAGAAATTGCGCCTGGGTCAATTCTAGACCTAGGACCTGAGCCGCTGTACCACGTTT
GGCTGCCCAAAAAGAAGCCGAGGCTGGTCCATCTAGACAAGCCAAGAGGGCTAGGGTGCCTAGAGGGCGCAGAAGAGCCACTTGAGGAGGCCAATGAAGAGGAGCCTGAT
TATACCAAACAAACACTATCAAGAGTAAAAAAAGTGAGATTGGAGGCGGGAGCGGAGGCCGATGATGCCAATGTTGTGACGCCCAAGAAGCCGTTCACATCCGTTAGGAG
AGTTCGGGGGTATTCCATTGTTCGAGAGGAAGATTCTCCAATTACCGCTGCGGATCCCGATACCCGAGGGGTGGTGACTAGGGAGCAATATGATGAGCTTCGGCATAAGT
ACGAGCTTGTTTTGGCTACTCAACATGCCACTTGTGCTTTCCTTAAGAAGATATACAGTGATGAAGCTCACCTTCATTCCCCGATGAGCTTGCGGCTGATTTACCATCAT
CTTCCCGTCTTCCTACCTATTCCACCGATGATGAGTCTTTCGATGATGAATAGAGGAGTATCTCCCTCTCTTTGCTTTGATATTTAG
Protein sequenceShow/hide protein sequence
MEGSSSSKPHDEENENKKVLLPPPTKLGMIPLEPPRISHEKLVFDPREQRRKYEEAIRMNPKRNLSVGGTNSEEINMKSHDARVNKESSSDKKLGGVSKFYLRKNQSLEE
KGAALDEEIARLHERAEMCNKNKEIRDKENESVYAKIEELNIKWQEFMENSKKVKYDTEPLEHSDSATVEIQCQIALGTIMDETPPATLQVHGDEFKEEEDNDNVFQYEV
RVRTPVHESQQDDEEPPVQHLNVSDPNFVATAETSDEEVRLTKVVKKTQKNKKVAEIAPGSILDLGPEPLYHVWLPKKKPRLVHLDKPRGLGCLEGAEEPLEEANEEEPD
YTKQTLSRVKKVRLEAGAEADDANVVTPKKPFTSVRRVRGYSIVREEDSPITAADPDTRGVVTREQYDELRHKYELVLATQHATCAFLKKIYSDEAHLHSPMSLRLIYHH
LPVFLPIPPMMSLSMMNRGVSPSLCFDI