; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g29320 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g29320
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr6:22079600..22085356
RNA-Seq ExpressionMoc06g29320
SyntenyMoc06g29320
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136647.1 uncharacterized protein LOC111008302 [Momordica charantia]1.6e-0776.19Show/hide
Query:  LNYVKTSLSGPSDAFKTIPAEKLVNNGLNNLTGYCREDSCRE
        L+YVKTSLSGP+DA KTIP EKLVNNGLN L GYCR+D  R+
Subjt:  LNYVKTSLSGPSDAFKTIPAEKLVNNGLNNLTGYCREDSCRE
TrEMBL top hitse value%identityAlignment
A0A6J1C617 Ribonuclease H7.6e-0876.19Show/hide
Query:  LNYVKTSLSGPSDAFKTIPAEKLVNNGLNNLTGYCREDSCRE
        L+YVKTSLSGP+DA KTIP EKLVNNGLN L GYCR+D  R+
Subjt:  LNYVKTSLSGPSDAFKTIPAEKLVNNGLNNLTGYCREDSCRE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACTGGGCGGCATGGCTGGGGCACTGTTTGAGAGTGTGGTGCGCGTGGGCATGGGCGCTGGTGGCGGCATAGGCCCGCGGGTGGCGAACGTGCTTAAAACGCCAAC
TGGGAGATTCATGCCGCTTAACTATGTCAAAACTAGCTTATCGGGCCCATCGGACGCCTTTAAGACCATTCCTGCCGAGAAACTAGTCAATAACGGGTTAAACAACCTTA
CCGGGTACTGCCGGGAAGATTCCTGCCGGGAAGATTCCGGACAAGGAATGACTAAACTTGGCAACTGGGATGAACATCCAACCATCCGAACACTATCAAGGGACGACGAC
TCTTGCGCTCATGCCGTGTCGTTCGAGTATACCGTACCGCATAGGGACCCAGTGGTGCAACCTCCAACACATGGATTGAGGCACAATGTCGGCAAACCCATGCCGCCCGA
CACTGTCCTCGAGTTTGCTATCCTCAAAGGAAACGTGTACGTGCAAAGTGGCGAGGAGTCACTCGCCAACGTAGAGCGCACGTCTGAACTCCAATTGACACGAAACTTGG
CGTGCTTGCACATCTCACTTATATGCTCTAACTCTAAAGCCGCTCGTCCAAACTCTCGATCGAGCCCCGACTTCCAGGTGATGCACCATCCTCCTTGGTCGTATCATGGC
ACTTCACTTATCGGCCCTCAACATGGCCCGATGGACGACATATGCTTGTCGCCGACGCTTGCACACTTGGTGAGGATCTCAACCCACTCTCTTATAGTAGGGTTGAGACA
CGGGGTAGGGGCGTGCTGTGAAGTTAGCGACAAGGCGCACGGCACAACAATACAAGGCGAAGGCAATGTCAGTGGTGTCGGTGACAAGCTCAACGGAGCCCGATTGGGGC
CCCGGGCCACGACCATAGAAGTCGGGGTTCCGTCGAGAGTTTGGACGAGCGGCTTTAGAGTTAGATGCATATTAGTGAAATATGGGGATGCATGGTGTTGGCTCTCCACC
ACCCCTGGGCCGTGTCAGGGCCTAAGTGAGCCACCTCATGGCACATGCGTGTGTCATGGCGAAAGCGAGCGTCTACAAGACGAGTGTCTTGGGCGAGTTCCGTCGAGGAT
AGTAAACTCGAGGACAGTGTCGGGCGGCACGGGTGTGCCGGCATTGCGCCTCGGTCCATGTGTCGGAGGTTGCACCACGAGGGTCTGTATGCGTGAGAATTCCGCTGCAA
GTGAAGCTCGGTTGAGAAAGAAAGAACCTCGCCTAAGGTCCGACGAAGCCACAAAGGGGCGCGAAAAGTGGATTGGAGCTAGAGTTCCTCGTAAGGCTGACATGGTTGAG
CTTAGATCATGGCGCCGCACAATTGAAGACTCCGCAAGTGTGTCAAGAGTGCCAGTTTGGCAGGACAGTTGCGTCAGTCAGTATCAGAGGCAGAAAGAAAGAATTAAAGC
CGGACTTCTTGAGACTCAAACGATGTCGTCGATAGGCATTCGATTGGGGGAAGTCCATCCCGTTAGAAAGCATGACCCAAGTCTTTTGCCTAAGGCTTGGCGGTTCCGTT
GCGAGCGGAAGCGATCAAGAAGGCAGCGTTTAATGATGCTCCCAAAAGTGCGCCCAAGAGAACGGGCCAGGTTGCATGACGAGTTTAGAGTGAACGACTTCGCAAAGAAG
TTCAAGAGGCCAGTAGTTGCTCAAGAAGGAGCGTTAGTCTGGTGCGATTATGTTCGCAAGAAGCTGCAGGCAGATAAGAGTCGTGCAGCGTATGTGCCACACGAAGGTGG
CGTGAAGGCAGCCGTCTGGGTTGTCCGTTTCAAGTGGTTTGAGAAAAGGCTTGTTGCAGTTGTGCGTGCCACGACAGGTGGCCTGTTGAAGACGTTGGCTGAAGGAATGC
AAGGCGAAGGCAATGTCAGTGGTGTCGATGACAAGCTCAACGGGGGCCAGTTGGGGCCCCGGGCCACGACCCTAGAAGGGGAGGCATGGTGTTGGCTCTCCACCACCCCT
GGGCCATGTCAGGGCCTAAGTGAGCCACCCCATGGCACATGCGTGTGTCATGGCGAGGGCGAGCGTCTACAAGACGAGTGTCTTGAGCGACTTCCGTCGAGGATAGTAAA
CTCGAGGACAGTGTCGGGAGGCACGGGTGTGCCGGCATTGCGCCTCGTTCCATGTGTCGGAGGTTGCACCACGAGGGTCCCTATGCAGTACGGTATGCTCGAACGATACG
GCACGAGCGCAAGAGTCATCGTGCCACGATAG
mRNA sequenceShow/hide mRNA sequence
ATGACACTGGGCGGCATGGCTGGGGCACTGTTTGAGAGTGTGGTGCGCGTGGGCATGGGCGCTGGTGGCGGCATAGGCCCGCGGGTGGCGAACGTGCTTAAAACGCCAAC
TGGGAGATTCATGCCGCTTAACTATGTCAAAACTAGCTTATCGGGCCCATCGGACGCCTTTAAGACCATTCCTGCCGAGAAACTAGTCAATAACGGGTTAAACAACCTTA
CCGGGTACTGCCGGGAAGATTCCTGCCGGGAAGATTCCGGACAAGGAATGACTAAACTTGGCAACTGGGATGAACATCCAACCATCCGAACACTATCAAGGGACGACGAC
TCTTGCGCTCATGCCGTGTCGTTCGAGTATACCGTACCGCATAGGGACCCAGTGGTGCAACCTCCAACACATGGATTGAGGCACAATGTCGGCAAACCCATGCCGCCCGA
CACTGTCCTCGAGTTTGCTATCCTCAAAGGAAACGTGTACGTGCAAAGTGGCGAGGAGTCACTCGCCAACGTAGAGCGCACGTCTGAACTCCAATTGACACGAAACTTGG
CGTGCTTGCACATCTCACTTATATGCTCTAACTCTAAAGCCGCTCGTCCAAACTCTCGATCGAGCCCCGACTTCCAGGTGATGCACCATCCTCCTTGGTCGTATCATGGC
ACTTCACTTATCGGCCCTCAACATGGCCCGATGGACGACATATGCTTGTCGCCGACGCTTGCACACTTGGTGAGGATCTCAACCCACTCTCTTATAGTAGGGTTGAGACA
CGGGGTAGGGGCGTGCTGTGAAGTTAGCGACAAGGCGCACGGCACAACAATACAAGGCGAAGGCAATGTCAGTGGTGTCGGTGACAAGCTCAACGGAGCCCGATTGGGGC
CCCGGGCCACGACCATAGAAGTCGGGGTTCCGTCGAGAGTTTGGACGAGCGGCTTTAGAGTTAGATGCATATTAGTGAAATATGGGGATGCATGGTGTTGGCTCTCCACC
ACCCCTGGGCCGTGTCAGGGCCTAAGTGAGCCACCTCATGGCACATGCGTGTGTCATGGCGAAAGCGAGCGTCTACAAGACGAGTGTCTTGGGCGAGTTCCGTCGAGGAT
AGTAAACTCGAGGACAGTGTCGGGCGGCACGGGTGTGCCGGCATTGCGCCTCGGTCCATGTGTCGGAGGTTGCACCACGAGGGTCTGTATGCGTGAGAATTCCGCTGCAA
GTGAAGCTCGGTTGAGAAAGAAAGAACCTCGCCTAAGGTCCGACGAAGCCACAAAGGGGCGCGAAAAGTGGATTGGAGCTAGAGTTCCTCGTAAGGCTGACATGGTTGAG
CTTAGATCATGGCGCCGCACAATTGAAGACTCCGCAAGTGTGTCAAGAGTGCCAGTTTGGCAGGACAGTTGCGTCAGTCAGTATCAGAGGCAGAAAGAAAGAATTAAAGC
CGGACTTCTTGAGACTCAAACGATGTCGTCGATAGGCATTCGATTGGGGGAAGTCCATCCCGTTAGAAAGCATGACCCAAGTCTTTTGCCTAAGGCTTGGCGGTTCCGTT
GCGAGCGGAAGCGATCAAGAAGGCAGCGTTTAATGATGCTCCCAAAAGTGCGCCCAAGAGAACGGGCCAGGTTGCATGACGAGTTTAGAGTGAACGACTTCGCAAAGAAG
TTCAAGAGGCCAGTAGTTGCTCAAGAAGGAGCGTTAGTCTGGTGCGATTATGTTCGCAAGAAGCTGCAGGCAGATAAGAGTCGTGCAGCGTATGTGCCACACGAAGGTGG
CGTGAAGGCAGCCGTCTGGGTTGTCCGTTTCAAGTGGTTTGAGAAAAGGCTTGTTGCAGTTGTGCGTGCCACGACAGGTGGCCTGTTGAAGACGTTGGCTGAAGGAATGC
AAGGCGAAGGCAATGTCAGTGGTGTCGATGACAAGCTCAACGGGGGCCAGTTGGGGCCCCGGGCCACGACCCTAGAAGGGGAGGCATGGTGTTGGCTCTCCACCACCCCT
GGGCCATGTCAGGGCCTAAGTGAGCCACCCCATGGCACATGCGTGTGTCATGGCGAGGGCGAGCGTCTACAAGACGAGTGTCTTGAGCGACTTCCGTCGAGGATAGTAAA
CTCGAGGACAGTGTCGGGAGGCACGGGTGTGCCGGCATTGCGCCTCGTTCCATGTGTCGGAGGTTGCACCACGAGGGTCCCTATGCAGTACGGTATGCTCGAACGATACG
GCACGAGCGCAAGAGTCATCGTGCCACGATAG
Protein sequenceShow/hide protein sequence
MTLGGMAGALFESVVRVGMGAGGGIGPRVANVLKTPTGRFMPLNYVKTSLSGPSDAFKTIPAEKLVNNGLNNLTGYCREDSCREDSGQGMTKLGNWDEHPTIRTLSRDDD
SCAHAVSFEYTVPHRDPVVQPPTHGLRHNVGKPMPPDTVLEFAILKGNVYVQSGEESLANVERTSELQLTRNLACLHISLICSNSKAARPNSRSSPDFQVMHHPPWSYHG
TSLIGPQHGPMDDICLSPTLAHLVRISTHSLIVGLRHGVGACCEVSDKAHGTTIQGEGNVSGVGDKLNGARLGPRATTIEVGVPSRVWTSGFRVRCILVKYGDAWCWLST
TPGPCQGLSEPPHGTCVCHGESERLQDECLGRVPSRIVNSRTVSGGTGVPALRLGPCVGGCTTRVCMRENSAASEARLRKKEPRLRSDEATKGREKWIGARVPRKADMVE
LRSWRRTIEDSASVSRVPVWQDSCVSQYQRQKERIKAGLLETQTMSSIGIRLGEVHPVRKHDPSLLPKAWRFRCERKRSRRQRLMMLPKVRPRERARLHDEFRVNDFAKK
FKRPVVAQEGALVWCDYVRKKLQADKSRAAYVPHEGGVKAAVWVVRFKWFEKRLVAVVRATTGGLLKTLAEGMQGEGNVSGVDDKLNGGQLGPRATTLEGEAWCWLSTTP
GPCQGLSEPPHGTCVCHGEGERLQDECLERLPSRIVNSRTVSGGTGVPALRLVPCVGGCTTRVPMQYGMLERYGTSARVIVPR