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Moc06g29560 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g29560
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:22256250..22257708
RNA-Seq ExpressionMoc06g29560
SyntenyMoc06g29560
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBG97541.1 disease resistance family protein / LRR family protein [Prunus dulcis]3.0e-1147.19Show/hide
Query:  MQVVDLLTYTKIHKTLNE-RQDGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHM
        MQ+ D L   K+++ L+E + +GM D++WT +D Q + +I+L LS NVA  +A + TT GLM ALS  Y+KPSA++KV+L  R FN+ M
Subjt:  MQVVDLLTYTKIHKTLNE-RQDGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHM

BBH05460.1 hypothetical protein Prudu_016848 [Prunus dulcis]3.0e-1147.19Show/hide
Query:  MQVVDLLTYTKIHKTLNE-RQDGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHM
        MQ+ D L   K+++ L+E + +GM D++WT +D Q + +I+L LS NVA  +A + TT GLM ALS  Y+KPSA++KV+L  R FN+ M
Subjt:  MQVVDLLTYTKIHKTLNE-RQDGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHM

KAG7561662.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]2.3e-1146.59Show/hide
Query:  MQVVDLLTYTKIHKTLNERQDGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHM
        MQ+ D L   K+H+ L+ + + M  +EW  +D QV+ +I+L LS NVA  +A + TT GLMK LSD Y+KPSAN+KV+L  + F++ M
Subjt:  MQVVDLLTYTKIHKTLNERQDGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHM

KAG7584790.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]2.3e-1146.59Show/hide
Query:  MQVVDLLTYTKIHKTLNERQDGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHM
        MQ+ D L   K+H+ L+ + + M  +EW  +D QV+ +I+L LS NVA  +A + TT GLMK LSD Y+KPSAN+KV+L  + F++ M
Subjt:  MQVVDLLTYTKIHKTLNERQDGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHM

KAG7593230.1 Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa]2.3e-1146.59Show/hide
Query:  MQVVDLLTYTKIHKTLNERQDGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHM
        MQ+ D L   K+H+ L+ + + M  +EW  +D QV+ +I+L LS NVA  +A + TT GLMK LSD Y+KPSAN+KV+L  + F++ M
Subjt:  MQVVDLLTYTKIHKTLNERQDGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHM

TrEMBL top hitse value%identityAlignment
A0A0D3BM55 Uncharacterized protein3.8e-1247.73Show/hide
Query:  MQVVDLLTYTKIHKTLNERQDGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHM
        MQ+ D L   K+H+TL+++ + M   EW  +D QV+ +I+L LS NVA  +A + TT GLMK LSD Y+KPSAN+KV+L  + F++ M
Subjt:  MQVVDLLTYTKIHKTLNERQDGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHM

A0A0D3CPI7 CCHC-type domain-containing protein2.9e-1246.59Show/hide
Query:  MQVVDLLTYTKIHKTLNERQDGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHM
        MQ++D L   K+H+ L+++ + M   EW  +D QV+ +I+L LS NVA  +A + TT GLMK LSD Y+KPSAN+KV+L  + F++ M
Subjt:  MQVVDLLTYTKIHKTLNERQDGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHM

A0A803L6Q2 Uncharacterized protein7.7e-1345.54Show/hide
Query:  MQVVDLLTYTKIHKTLNERQ-DGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHMYVSSFRMNLIS
        MQ+ D L   K+++ L E++ DGM + EW  +D Q + +I+L LS NVA  +A +TTT GLMKALS+ Y+KPSA++KV+L  R F++ M   S+   + S
Subjt:  MQVVDLLTYTKIHKTLNERQ-DGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHMYVSSFRMNLIS

Query:  V
        V
Subjt:  V

A0A803LBR6 Uncharacterized protein2.2e-1249.44Show/hide
Query:  MQVVDLLTYTKIHKTLNERQ-DGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHM
        MQ+ D L   K+++ L E++ DGM + EW  +D Q + +I+L LS NVA  +A +TTTTGLMKALS+ Y+KPSA++KV+L  R F++ M
Subjt:  MQVVDLLTYTKIHKTLNERQ-DGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHM

A0A803LV23 Uncharacterized protein5.0e-1248.31Show/hide
Query:  MQVVDLLTYTKIHKTLNERQ-DGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHM
        +Q+ D L   K+++ L E++ DGM + EW  +D Q + +I+L LS NVA  +A +TTTTGLMKALS+ Y+KPSA++KV+L  R F++ M
Subjt:  MQVVDLLTYTKIHKTLNERQ-DGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29785.1 unknown protein1.1e-0837.66Show/hide
Query:  MQVVDLLTYTKIHKTLNERQDGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKV
        M++ D L   K+H+ L ++ + M+  +W  +  QV+ +I+L +S N+A  +A + +  GLMK LSD Y+KPS N+ V
Subjt:  MQVVDLLTYTKIHKTLNERQDGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGTGGTGGATCTTCTTACATACACGAAAATACACAAAACCTTGAATGAACGACAGGATGGGATGACAGACAAGGAATGGACGGAGATGGATGAACAGGTCGTAGT
GATCATCAAGTTGTGCTTGTCGATGAATGTGGCAAGTCTCATGGCGAGTCAGACAACGACAACGGGACTGATGAAGGCGCTGTCGGATAGATACCAAAAACCCTCTGCCA
ACAGCAAGGTGTACCTCACTACGAGATACTTCAACATTCATATGTATGTATCCAGTTTCAGAATGAATTTGATATCAGTAGGGAAGTTGGATGACAAAGGCTACAAAAAT
GAGTTTACAGGGAACAGTAGAGGAAATGGAAAGAAGAACAACTCAGTGAAGTGTTTAGTAGATTTTCAAGATAAAGCCCCAGCTGTCAGACGGTTTGGCAAGCTGATGAA
GTCGCATAGGTGTAAGAGTGCATCAAGGAGAATGACTATAGTTGGTGCTGAGGTTGAGGGTGAGGTCTCTAACTTGGCAACGGGCTTGGTTGGGTTGGCCAAGTCATCAG
TGAAGAAGCTCTCCTTCCAAAGTTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGTGGTGGATCTTCTTACATACACGAAAATACACAAAACCTTGAATGAACGACAGGATGGGATGACAGACAAGGAATGGACGGAGATGGATGAACAGGTCGTAGT
GATCATCAAGTTGTGCTTGTCGATGAATGTGGCAAGTCTCATGGCGAGTCAGACAACGACAACGGGACTGATGAAGGCGCTGTCGGATAGATACCAAAAACCCTCTGCCA
ACAGCAAGGTGTACCTCACTACGAGATACTTCAACATTCATATGTATGTATCCAGTTTCAGAATGAATTTGATATCAGTAGGGAAGTTGGATGACAAAGGCTACAAAAAT
GAGTTTACAGGGAACAGTAGAGGAAATGGAAAGAAGAACAACTCAGTGAAGTGTTTAGTAGATTTTCAAGATAAAGCCCCAGCTGTCAGACGGTTTGGCAAGCTGATGAA
GTCGCATAGGTGTAAGAGTGCATCAAGGAGAATGACTATAGTTGGTGCTGAGGTTGAGGGTGAGGTCTCTAACTTGGCAACGGGCTTGGTTGGGTTGGCCAAGTCATCAG
TGAAGAAGCTCTCCTTCCAAAGTTACTAG
Protein sequenceShow/hide protein sequence
MQVVDLLTYTKIHKTLNERQDGMTDKEWTEMDEQVVVIIKLCLSMNVASLMASQTTTTGLMKALSDRYQKPSANSKVYLTTRYFNIHMYVSSFRMNLISVGKLDDKGYKN
EFTGNSRGNGKKNNSVKCLVDFQDKAPAVRRFGKLMKSHRCKSASRRMTIVGAEVEGEVSNLATGLVGLAKSSVKKLSFQSY