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Moc06g29830 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g29830
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr6:22461609..22462853
RNA-Seq ExpressionMoc06g29830
SyntenyMoc06g29830
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136647.1 uncharacterized protein LOC111008302 [Momordica charantia]2.2e-1387.5Show/hide
Query:  MEIGAPESSWMDPIVDFIRGNSPQDPKERRKLARRAARFVVEHLVLRR
        MEIGAPESSWMDPI DFIRGNSPQDPKERRKLARRAARFVV    L R
Subjt:  MEIGAPESSWMDPIVDFIRGNSPQDPKERRKLARRAARFVVEHLVLRR

XP_022144032.1 uncharacterized protein LOC111013824 [Momordica charantia]1.9e-1774.55Show/hide
Query:  VLRRVQTHVGALDPTWEGPFEVKGIVGPRTYVLADLKGDVLAHPWNAEHLKRYYP
        V +++Q+HVG LDP+WEGPFEVKGI+   TY+LADL+G+VLAHPWNAEHLKRYYP
Subjt:  VLRRVQTHVGALDPTWEGPFEVKGIVGPRTYVLADLKGDVLAHPWNAEHLKRYYP

XP_022144032.1 uncharacterized protein LOC111013824 [Momordica charantia]4.8e-0552.08Show/hide
Query:  MEIGAPESSWMDPIVDFIRGNSPQDPKERRKLARRAARFVVEHLVLRR
        ME+  PE SWMDPIV+FI+ N PQD K  +K++R+ ARF++    L R
Subjt:  MEIGAPESSWMDPIVDFIRGNSPQDPKERRKLARRAARFVVEHLVLRR

XP_022144032.1 uncharacterized protein LOC111013824 [Momordica charantia]2.2e-1387.5Show/hide
Query:  MEIGAPESSWMDPIVDFIRGNSPQDPKERRKLARRAARFVVEHLVLRR
        MEIGAPESSWMDPI DFIRGNSPQDPKERRKLARRAARFVV    L R
Subjt:  MEIGAPESSWMDPIVDFIRGNSPQDPKERRKLARRAARFVVEHLVLRR

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]8.2e-1358.33Show/hide
Query:  FVVEHLVLRRVQTHVGALDPTWEGPFEVKGIVGPRTYVLADLKGDVLAHPWNAEHLKRYY
        F    LVL++V  HVGAL+P WEGP+ V  I+ PR Y+L+DL G  L HPWNAEHL+ YY
Subjt:  FVVEHLVLRRVQTHVGALDPTWEGPFEVKGIVGPRTYVLADLKGDVLAHPWNAEHLKRYY

XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]6.5e-1872.13Show/hide
Query:  FVVEHLVLRRVQTHVGALDPTWEGPFEVKGIVGPRTYVLADLKGDVLAHPWNAEHLKRYYP
        F V HLV  ++Q+HVG LDP+WE  FEVKGIV P TY+LADL+  VLAHPWNAEHLKRYYP
Subjt:  FVVEHLVLRRVQTHVGALDPTWEGPFEVKGIVGPRTYVLADLKGDVLAHPWNAEHLKRYYP

TrEMBL top hitse value%identityAlignment
A0A6J1C617 Ribonuclease H1.0e-1387.5Show/hide
Query:  MEIGAPESSWMDPIVDFIRGNSPQDPKERRKLARRAARFVVEHLVLRR
        MEIGAPESSWMDPI DFIRGNSPQDPKERRKLARRAARFVV    L R
Subjt:  MEIGAPESSWMDPIVDFIRGNSPQDPKERRKLARRAARFVVEHLVLRR

A0A6J1CSJ1 Ribonuclease H9.1e-1874.55Show/hide
Query:  VLRRVQTHVGALDPTWEGPFEVKGIVGPRTYVLADLKGDVLAHPWNAEHLKRYYP
        V +++Q+HVG LDP+WEGPFEVKGI+   TY+LADL+G+VLAHPWNAEHLKRYYP
Subjt:  VLRRVQTHVGALDPTWEGPFEVKGIVGPRTYVLADLKGDVLAHPWNAEHLKRYYP

A0A6J1CSJ1 Ribonuclease H2.3e-0552.08Show/hide
Query:  MEIGAPESSWMDPIVDFIRGNSPQDPKERRKLARRAARFVVEHLVLRR
        ME+  PE SWMDPIV+FI+ N PQD K  +K++R+ ARF++    L R
Subjt:  MEIGAPESSWMDPIVDFIRGNSPQDPKERRKLARRAARFVVEHLVLRR

A0A6J1CSJ1 Ribonuclease H1.0e-1387.5Show/hide
Query:  MEIGAPESSWMDPIVDFIRGNSPQDPKERRKLARRAARFVVEHLVLRR
        MEIGAPESSWMDPI DFIRGNSPQDPKERRKLARRAARFVV    L R
Subjt:  MEIGAPESSWMDPIVDFIRGNSPQDPKERRKLARRAARFVVEHLVLRR

A0A6J1DWM2 Ribonuclease H4.0e-1358.33Show/hide
Query:  FVVEHLVLRRVQTHVGALDPTWEGPFEVKGIVGPRTYVLADLKGDVLAHPWNAEHLKRYY
        F    LVL++V  HVGAL+P WEGP+ V  I+ PR Y+L+DL G  L HPWNAEHL+ YY
Subjt:  FVVEHLVLRRVQTHVGALDPTWEGPFEVKGIVGPRTYVLADLKGDVLAHPWNAEHLKRYY

A0A6J1DXL9 uncharacterized protein LOC1110254483.1e-1872.13Show/hide
Query:  FVVEHLVLRRVQTHVGALDPTWEGPFEVKGIVGPRTYVLADLKGDVLAHPWNAEHLKRYYP
        F V HLV  ++Q+HVG LDP+WE  FEVKGIV P TY+LADL+  VLAHPWNAEHLKRYYP
Subjt:  FVVEHLVLRRVQTHVGALDPTWEGPFEVKGIVGPRTYVLADLKGDVLAHPWNAEHLKRYYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCGGCGCTCCAGAGTCCTCATGGATGGACCCGATTGTGGACTTCATTAGGGGCAACTCACCACAAGACCCCAAGGAGCGCAGAAAGTTGGCAAGGCGA
GCAGCTCGGTTCGTGGTCGAACATCTGGTCTTAAGGAGGGTCCAAACCCATGTGGGTGCCCTTGATCCGACCTGGGAGGGCCCGTTTGAGGTCAAGGGCATAGTC
GGACCTAGGACGTACGTATTGGCCGATCTGAAAGGAGACGTCCTCGCGCACCCGTGGAACGCGGAGCACCTGAAGCGTTATTATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCGGCGCTCCAGAGTCCTCATGGATGGACCCGATTGTGGACTTCATTAGGGGCAACTCACCACAAGACCCCAAGGAGCGCAGAAAGTTGGCAAGGCGA
GCAGCTCGGTTCGTGGTCGAACATCTGGTCTTAAGGAGGGTCCAAACCCATGTGGGTGCCCTTGATCCGACCTGGGAGGGCCCGTTTGAGGTCAAGGGCATAGTC
GGACCTAGGACGTACGTATTGGCCGATCTGAAAGGAGACGTCCTCGCGCACCCGTGGAACGCGGAGCACCTGAAGCGTTATTATCCTTGA
Protein sequenceShow/hide protein sequence
MEIGAPESSWMDPIVDFIRGNSPQDPKERRKLARRAARFVVEHLVLRRVQTHVGALDPTWEGPFEVKGIVGPRTYVLADLKGDVLAHPWNAEHLKRYYP