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Moc06g29990 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g29990
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:22544948..22549076
RNA-Seq ExpressionMoc06g29990
SyntenyMoc06g29990
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4377212.1 hypothetical protein G4B88_009204 [Cannabis sativa]1.2e-1434.38Show/hide
Query:  VGAKGGICLLWQQEMNVMIKSFSLGHIDALVEWEGKFWRFTGDRRSWSNETQIFERLDLFLGNEAFCELFKDIVITHLDWTKSDHRPIVHELVKEDQVQR
        VG  GG+ LLW ++  V +KSFS+GHIDALV+  GK                + ERLD F  N+ +  LF  + + + D   SDHRP+V  L    +VQ+
Subjt:  VGAKGGICLLWQQEMNVMIKSFSLGHIDALVEWEGKFWRFTGDRRSWSNETQIFERLDLFLGNEAFCELFKDIVITHLDWTKSDHRPIVHELVKEDQVQR

Query:  TSRRVRGFKFDEHWASYPECREIIAASGHWVSSSGRQLPLEHSLL----FCSKKLKGWGK
          ++ R F+F+ HW    EC +I+    H        L  + S+L     C+++L  W K
Subjt:  TSRRVRGFKFDEHWASYPECREIIAASGHWVSSSGRQLPLEHSLL----FCSKKLKGWGK

KAF4379184.1 hypothetical protein G4B88_010578 [Cannabis sativa]6.4e-1330.73Show/hide
Query:  GAKGGICLLWQQEMNVMIKSFSLGHIDALVEW-EGKFWRFTGDRRSWSNETQIFERLDLFLGNEAFCELFKDIVITHLDWTKSDHRPIVHELVKEDQVQR
        G KGG+ LLW+    V +  FS  HID  +       WR TG     SN  +I  RLD  L +  + + F   ++T+ D++ SDH P+  ++        
Subjt:  GAKGGICLLWQQEMNVMIKSFSLGHIDALVEW-EGKFWRFTGDRRSWSNETQIFERLDLFLGNEAFCELFKDIVITHLDWTKSDHRPIVHELVKEDQVQR

Query:  TSRRVRGFKFDEHWASYPECREIIAASGHWVSSSGRQLPLEHSLLFCSKKLKGWGKTVNRNLVLQIGNQKRLLVDLYNE
         +  V  F+F+  W   P C +I+ A   W   +  QLPL   +  CSK+L+ WG+++  N   ++   K +L  L  E
Subjt:  TSRRVRGFKFDEHWASYPECREIIAASGHWVSSSGRQLPLEHSLLFCSKKLKGWGKTVNRNLVLQIGNQKRLLVDLYNE

KAF4381998.1 hypothetical protein G4B88_006630 [Cannabis sativa]5.4e-1227.84Show/hide
Query:  AKGGICLLWQQEMNVMIKSFSLGHIDALVEWEGK-FWRFTG-----------------------------------------------------------
        + GG+ LLW  +  V +KSF+ GHIDALV+  G+  WRFTG                                                           
Subjt:  AKGGICLLWQQEMNVMIKSFSLGHIDALVEWEGK-FWRFTG-----------------------------------------------------------

Query:  --DRRS------------WSNETQ----IFERLDLFLGNEAFCELFKDIVITHLDWTKSDHRPIVHELVKEDQVQRTSRRVRGFKFDEHWASYPECREII
          DR S            W N+ Q    + ERLD +  N+ + +LF  + + + D+  SDHRPIV  L    + QR  ++ R F+F+ HW   PEC+EII
Subjt:  --DRRS------------WSNETQ----IFERLDLFLGNEAFCELFKDIVITHLDWTKSDHRPIVHELVKEDQVQRTSRRVRGFKFDEHWASYPECREII

Query:  AASGHWVSSS---GRQLPLEHSLLFCSKKLKGWGKTVNRNLVLQIGNQKRLLVDL
          S  W+S       Q  L      C+ +L  W K+   +L  Q+   ++ L DL
Subjt:  AASGHWVSSS---GRQLPLEHSLLFCSKKLKGWGKTVNRNLVLQIGNQKRLLVDL

KAF4383622.1 hypothetical protein F8388_014122 [Cannabis sativa]5.4e-1227.84Show/hide
Query:  AKGGICLLWQQEMNVMIKSFSLGHIDALVEWEGK-FWRFTG-----------------------------------------------------------
        + GG+ LLW  +  V +KSF+ GHIDALV+  G+  WRFTG                                                           
Subjt:  AKGGICLLWQQEMNVMIKSFSLGHIDALVEWEGK-FWRFTG-----------------------------------------------------------

Query:  --DRRS------------WSNETQ----IFERLDLFLGNEAFCELFKDIVITHLDWTKSDHRPIVHELVKEDQVQRTSRRVRGFKFDEHWASYPECREII
          DR S            W N+ Q    + ERLD +  N+ + +LF  + + + D+  SDHRPIV  L    + QR  ++ R F+F+ HW   PEC+EII
Subjt:  --DRRS------------WSNETQ----IFERLDLFLGNEAFCELFKDIVITHLDWTKSDHRPIVHELVKEDQVQRTSRRVRGFKFDEHWASYPECREII

Query:  AASGHWVSSS---GRQLPLEHSLLFCSKKLKGWGKTVNRNLVLQIGNQKRLLVDL
          S  W+S       Q  L      C+ +L  W K+   +L  Q+   ++ L DL
Subjt:  AASGHWVSSS---GRQLPLEHSLLFCSKKLKGWGKTVNRNLVLQIGNQKRLLVDL

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]2.2e-1330.94Show/hide
Query:  CVSTASSMCCRVGAKGGICLLWQQEMNVMIKSFSLGHIDALVEWEGKFWRFTG---------DRRSWS--------------------------------
        CVS AS+     G  GG+ LLW  + NV I+S S GHID+++  +   WRFTG            SW                                 
Subjt:  CVSTASSMCCRVGAKGGICLLWQQEMNVMIKSFSLGHIDALVEWEGKFWRFTG---------DRRSWS--------------------------------

Query:  --NETQ-----IFERLDLFLGNEAFCELFKDIVITHLDWTKSDHRPIVHELVKEDQVQRTSRRVRGFKFDEHWASYPECREIIAASGHWVSSSGRQL-PL
          NE+Q     I+ERLD FL NE+      ++ +THL+   SDHRPI+     E     T  + R  +F+E W     CR+II  +G W S  G  +   
Subjt:  --NETQ-----IFERLDLFLGNEAFCELFKDIVITHLDWTKSDHRPIVHELVKEDQVQRTSRRVRGFKFDEHWASYPECREIIAASGHWVSSSGRQL-PL

Query:  EHSLLFCSKKLKGWGK-TVNRNL
        +  +  C  +L  W K  +NR+L
Subjt:  EHSLLFCSKKLKGWGK-TVNRNL

TrEMBL top hitse value%identityAlignment
A0A2N9ELA8 Uncharacterized protein9.6e-1531.55Show/hide
Query:  GAKGGICLLWQQEMNVMIKSFSLGHIDALVEWEGKFWRFTG-------DRRSWSNETQIFERLDLFLGNEAFCELFKDIVITHLDWTKSDHRPIVHELVK
        G K G+ LLW +++++ I S++  HIDA +  +   WRFTG        +R    E     RLD   GN  + E+F++  + ++  + SDH  I   LV 
Subjt:  GAKGGICLLWQQEMNVMIKSFSLGHIDALVEWEGKFWRFTG-------DRRSWSNETQIFERLDLFLGNEAFCELFKDIVITHLDWTKSDHRPIVHELVK

Query:  EDQVQRTSRRVRGFKFDEHWASYPECREIIAASGHWVSSSGRQLP---LEHSLLFCSKKLKGWGKTVNRNLVLQIGNQKRLLVDLYN
         DQ++  +R  R F F++ W    EC ++I A   W    G + P   L   L  C +KL GW K    N+  ++G  +  L  L N
Subjt:  EDQVQRTSRRVRGFKFDEHWASYPECREIIAASGHWVSSSGRQLP---LEHSLLFCSKKLKGWGKTVNRNLVLQIGNQKRLLVDLYN

A0A6J1DUG8 uncharacterized protein LOC1110241351.1e-1330.94Show/hide
Query:  CVSTASSMCCRVGAKGGICLLWQQEMNVMIKSFSLGHIDALVEWEGKFWRFTG---------DRRSWS--------------------------------
        CVS AS+     G  GG+ LLW  + NV I+S S GHID+++  +   WRFTG            SW                                 
Subjt:  CVSTASSMCCRVGAKGGICLLWQQEMNVMIKSFSLGHIDALVEWEGKFWRFTG---------DRRSWS--------------------------------

Query:  --NETQ-----IFERLDLFLGNEAFCELFKDIVITHLDWTKSDHRPIVHELVKEDQVQRTSRRVRGFKFDEHWASYPECREIIAASGHWVSSSGRQL-PL
          NE+Q     I+ERLD FL NE+      ++ +THL+   SDHRPI+     E     T  + R  +F+E W     CR+II  +G W S  G  +   
Subjt:  --NETQ-----IFERLDLFLGNEAFCELFKDIVITHLDWTKSDHRPIVHELVKEDQVQRTSRRVRGFKFDEHWASYPECREIIAASGHWVSSSGRQL-PL

Query:  EHSLLFCSKKLKGWGK-TVNRNL
        +  +  C  +L  W K  +NR+L
Subjt:  EHSLLFCSKKLKGWGK-TVNRNL

A0A6P6XBX4 uncharacterized protein LOC1137410697.6e-1229.15Show/hide
Query:  KGGICLLWQQEMNVMIKSFSLGHIDALVEWE--GKFWR-----------------------------------FTGDRRSWSN----ETQIFERLDLFLG
        +GG+ LLW+ E+++ IKSFS GHID++V+ E  G  WR                                   FTG R +WS       +I ERLD  + 
Subjt:  KGGICLLWQQEMNVMIKSFSLGHIDALVEWE--GKFWR-----------------------------------FTGDRRSWSN----ETQIFERLDLFLG

Query:  NEAFCELFKDIVITHLDWTKSDHRPIVHELVKEDQVQRTSRRVR-GFKFDEHWASYPECREIIAASGHWVSSSGRQLPLEHSLLFCSKK----LKGWGKT
           +C LF    ++HL  + SDH PI   +     V R  +R +   KF++ W +  EC  I+    +W S +    P+E ++  C++K    L  WG+ 
Subjt:  NEAFCELFKDIVITHLDWTKSDHRPIVHELVKEDQVQRTSRRVR-GFKFDEHWASYPECREIIAASGHWVSSSGRQLPLEHSLLFCSKK----LKGWGKT

Query:  VNRNLVLQIGNQKRLLVDLYNEP
           +L  QI   K  L  +   P
Subjt:  VNRNLVLQIGNQKRLLVDLYNEP

A0A7J6G362 Uncharacterized protein5.6e-1534.38Show/hide
Query:  VGAKGGICLLWQQEMNVMIKSFSLGHIDALVEWEGKFWRFTGDRRSWSNETQIFERLDLFLGNEAFCELFKDIVITHLDWTKSDHRPIVHELVKEDQVQR
        VG  GG+ LLW ++  V +KSFS+GHIDALV+  GK                + ERLD F  N+ +  LF  + + + D   SDHRP+V  L    +VQ+
Subjt:  VGAKGGICLLWQQEMNVMIKSFSLGHIDALVEWEGKFWRFTGDRRSWSNETQIFERLDLFLGNEAFCELFKDIVITHLDWTKSDHRPIVHELVKEDQVQR

Query:  TSRRVRGFKFDEHWASYPECREIIAASGHWVSSSGRQLPLEHSLL----FCSKKLKGWGK
          ++ R F+F+ HW    EC +I+    H        L  + S+L     C+++L  W K
Subjt:  TSRRVRGFKFDEHWASYPECREIIAASGHWVSSSGRQLPLEHSLL----FCSKKLKGWGK

A0A803PZ98 Uncharacterized protein4.5e-1231.21Show/hide
Query:  GAKGGICLLWQQEMNVMIKSFSLGHIDALVEWE-GKFWRFT----------------------------GDRRSWSN---ETQIFERLDLFLGNEAFCEL
        G  GG+ LLW ++ +V IKS+++ HIDA+VE   G  WRFT                            GD  +W N      IFE+LD  L N A+ + 
Subjt:  GAKGGICLLWQQEMNVMIKSFSLGHIDALVEWE-GKFWRFT----------------------------GDRRSWSN---ETQIFERLDLFLGNEAFCEL

Query:  FKDIVITHLDWTKSDHRPIVHELVKEDQVQRTSRR-VRGFKFDEHWASYPECREIIAASGHWVSSSGRQLPLE
        FK   ++ L+W  SDHRP++ +   +D+ +   ++    F F++ WA   EC +II     W  +  +  PL+
Subjt:  FKDIVITHLDWTKSDHRPIVHELVKEDQVQRTSRR-VRGFKFDEHWASYPECREIIAASGHWVSSSGRQLPLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTAGGACGTTCATCGTTGCCTCTGGTCGAGCAGTTGGGATCTCCAATCAGGCAGTGTTCGGCTACGAGACGGTCATTGCCTCGCCTCCACCCAATTCCG
ACCATAGGATATCCAGTGCCATTAGAGCACCCCCATGTTAGGGGCAAGTTGAGTTGGAGCCACGCTAGTGAAAAACAGGAACGCTTGAGCAAAACGAGAGAGGGG
AAGTCTGACCTCGTTCCAAAACATTTGCGGATAGAAGCTCACCTAGCCTGGGGGAGGAGAGTCTATCCTCTATCCGCAGATGAAAGACGCATGAGGACTGAGTCG
GATCCCAACAGCCTTGAAGATCGCAGTCGCCGATCCCGCCGCTTCAAAAACCACTCCAGGGACGCTATCGCCCGTGAAACAACGGTGGACACATCTCCCCAGTCA
CAACAGCCGTACGTACTGACAACTGATCCGCACAGACATGTGATCGCCCTTTCGCGGACGTGGGCCCACTGGGGAACCGATTCTCAGTGGGAATGTCGCCTAATA
GAAGGCGTGTCTGCTCACAACAAGACGAACACCCCAAACGGTTACGCCCCGTGCGTATCCACAGCTAGCAGCATGTGCTGTCGTGTTGGTGCCAAGGGTGGTATT
TGCTTGCTTTGGCAGCAAGAAATGAATGTTATGATCAAGTCCTTTTCTCTTGGCCACATCGATGCTTTGGTCGAATGGGAAGGTAAGTTCTGGAGATTCACTGGT
GATAGGAGGAGTTGGAGTAATGAGACTCAGATCTTTGAACGACTTGATCTTTTTCTTGGCAATGAAGCCTTTTGTGAGTTGTTTAAGGATATCGTGATTACCCAT
TTAGATTGGACCAAATCTGATCACAGACCGATTGTTCATGAACTAGTAAAAGAAGATCAAGTGCAAAGGACAAGTAGGAGAGTCCGTGGGTTTAAATTTGATGAA
CATTGGGCCTCTTATCCAGAATGCAGAGAGATCATTGCAGCTTCGGGCCATTGGGTGTCTTCCTCCGGTCGTCAGCTGCCTCTTGAACATAGTTTACTATTTTGT
TCCAAGAAGTTAAAGGGTTGGGGGAAGACTGTGAACAGAAATTTGGTTTTACAGATTGGAAATCAGAAGAGATTATTAGTTGACTTATACAACGAGCCCCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTAGGACGTTCATCGTTGCCTCTGGTCGAGCAGTTGGGATCTCCAATCAGGCAGTGTTCGGCTACGAGACGGTCATTGCCTCGCCTCCACCCAATTCCG
ACCATAGGATATCCAGTGCCATTAGAGCACCCCCATGTTAGGGGCAAGTTGAGTTGGAGCCACGCTAGTGAAAAACAGGAACGCTTGAGCAAAACGAGAGAGGGG
AAGTCTGACCTCGTTCCAAAACATTTGCGGATAGAAGCTCACCTAGCCTGGGGGAGGAGAGTCTATCCTCTATCCGCAGATGAAAGACGCATGAGGACTGAGTCG
GATCCCAACAGCCTTGAAGATCGCAGTCGCCGATCCCGCCGCTTCAAAAACCACTCCAGGGACGCTATCGCCCGTGAAACAACGGTGGACACATCTCCCCAGTCA
CAACAGCCGTACGTACTGACAACTGATCCGCACAGACATGTGATCGCCCTTTCGCGGACGTGGGCCCACTGGGGAACCGATTCTCAGTGGGAATGTCGCCTAATA
GAAGGCGTGTCTGCTCACAACAAGACGAACACCCCAAACGGTTACGCCCCGTGCGTATCCACAGCTAGCAGCATGTGCTGTCGTGTTGGTGCCAAGGGTGGTATT
TGCTTGCTTTGGCAGCAAGAAATGAATGTTATGATCAAGTCCTTTTCTCTTGGCCACATCGATGCTTTGGTCGAATGGGAAGGTAAGTTCTGGAGATTCACTGGT
GATAGGAGGAGTTGGAGTAATGAGACTCAGATCTTTGAACGACTTGATCTTTTTCTTGGCAATGAAGCCTTTTGTGAGTTGTTTAAGGATATCGTGATTACCCAT
TTAGATTGGACCAAATCTGATCACAGACCGATTGTTCATGAACTAGTAAAAGAAGATCAAGTGCAAAGGACAAGTAGGAGAGTCCGTGGGTTTAAATTTGATGAA
CATTGGGCCTCTTATCCAGAATGCAGAGAGATCATTGCAGCTTCGGGCCATTGGGTGTCTTCCTCCGGTCGTCAGCTGCCTCTTGAACATAGTTTACTATTTTGT
TCCAAGAAGTTAAAGGGTTGGGGGAAGACTGTGAACAGAAATTTGGTTTTACAGATTGGAAATCAGAAGAGATTATTAGTTGACTTATACAACGAGCCCCCATAG
Protein sequenceShow/hide protein sequence
MGVGRSSLPLVEQLGSPIRQCSATRRSLPRLHPIPTIGYPVPLEHPHVRGKLSWSHASEKQERLSKTREGKSDLVPKHLRIEAHLAWGRRVYPLSADERRMRTES
DPNSLEDRSRRSRRFKNHSRDAIARETTVDTSPQSQQPYVLTTDPHRHVIALSRTWAHWGTDSQWECRLIEGVSAHNKTNTPNGYAPCVSTASSMCCRVGAKGGI
CLLWQQEMNVMIKSFSLGHIDALVEWEGKFWRFTGDRRSWSNETQIFERLDLFLGNEAFCELFKDIVITHLDWTKSDHRPIVHELVKEDQVQRTSRRVRGFKFDE
HWASYPECREIIAASGHWVSSSGRQLPLEHSLLFCSKKLKGWGKTVNRNLVLQIGNQKRLLVDLYNEPP