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Moc06g30230 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g30230
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUBN2_3 domain-containing protein
Genome locationchr6:22735407..22737784
RNA-Seq ExpressionMoc06g30230
SyntenyMoc06g30230
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON58064.1 hypothetical protein TorRG33x02_291990 [Trema orientale]2.5e-2448.41Show/hide
Query:  MYFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSIPILPSPTAAVSLAVN
        +YFT+LK+VW+E   Y+P CTCGKC+C GVK+++ + Q EY+MSFLMGL++SFA  R Q+LL+DP P INK FSL+SQEE+QR + I  S +        
Subjt:  MYFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSIPILPSPTAAVSLAVN

Query:  QSSRTSSSSSSAGYRQKGGQRNPSQS
        + + T +S+  +G    GG R  + S
Subjt:  QSSRTSSSSSSAGYRQKGGQRNPSQS

XP_022154919.1 uncharacterized protein LOC111022065 [Momordica charantia]1.1e-2443.98Show/hide
Query:  YFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSI--PILPSPTAAVSLAV
        YFTRLK++W E   YRPAC+CG+CS  GVKSI+   Q EY+M+FLMGLN SF+  RAQ+LLM+P+P+IN+AF+L++QE QQRSI  P + SPTA+   A 
Subjt:  YFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSI--PILPSPTAAVSLAV

Query:  NQSSRTSSSSSSAGYRQK------------GGQRNPSQSVSTVPPMSYGTHSVSSTTANAVSSSIAPPGSSTASL---GVPDTLAYALTTD
        + SS +  +SSSA + ++            G   +    +   PP  Y +    +T++NA SS  A   S + S    G+ ++LA  LT D
Subjt:  NQSSRTSSSSSSAGYRQK------------GGQRNPSQSVSTVPPMSYGTHSVSSTTANAVSSSIAPPGSSTASL---GVPDTLAYALTTD

XP_022154973.1 uncharacterized protein LOC111022117 [Momordica charantia]2.0e-3446.07Show/hide
Query:  MYFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSIPILPSPTAAVSLAVN
        MY+T+LK++WDEY++YRP CTCG CSC G + +++FVQFE+LM FLMGLNESFA  RAQILLMDP PSI KAFSLISQEEQQR IP+  +P+ AV LAVN
Subjt:  MYFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSIPILPSPTAAVSLAVN

Query:  QSSRTSSSSSS-------------------------------AGYRQKGGQRNPSQSVSTVPPMSYGTHSVSSTTANAVSSSIAPPGSSTA
        QS  +S+S+S                                +GYR KG Q + + S+++    +  +   S++ + A+ +SI+   +S++
Subjt:  QSSRTSSSSSS-------------------------------AGYRQKGGQRNPSQSVSTVPPMSYGTHSVSSTTANAVSSSIAPPGSSTA

XP_022883903.1 uncharacterized protein LOC111400748 [Olea europaea var. sylvestris]1.9e-2459.34Show/hide
Query:  MYFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSIPILPSP
        +YFT+LK++W+E   YRP C CGKC+C+GVK ++++ Q EY MSFLMGLN+S++  R QILLMDP P INK F+LISQEE QR I    +P
Subjt:  MYFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSIPILPSP

XP_038895765.1 uncharacterized protein LOC120083929 [Benincasa hispida]6.5e-3341.7Show/hide
Query:  MYFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSIPILPSPTAAVSLAVN
        MYFT++KS  DEY++YRP CTCG+C+C G+KS+++F+QFEYL+ F MGLN+SF  TR+Q+LLMDP P +NKAFS + Q+EQ +S+   PS    +++  N
Subjt:  MYFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSIPILPSPTAAVSLAVN

Query:  ----QSSRTSSSSSSAGYRQKGGQR---NPSQSVSTVPPMSYG---THSVSSTTANAVSSSIAPPGSSTASLGVPDTLAY------ALTTDDSVFFKFYA
            Q S      S+  ++Q        NP  S S+  P   G   T+         + S +    + T S+       Y      ALT D +VF  F  
Subjt:  ----QSSRTSSSSSSAGYRQKGGQR---NPSQSVSTVPPMSYG---THSVSSTTANAVSSSIAPPGSSTASLGVPDTLAY------ALTTDDSVFFKFYA

Query:  DYCDIHEKSTLRTIGKGKFCDGL
        D CDI  KSTL+TIGKG+  DGL
Subjt:  DYCDIHEKSTLRTIGKGKFCDGL

TrEMBL top hitse value%identityAlignment
A0A2P5CAN6 Uncharacterized protein1.2e-2448.41Show/hide
Query:  MYFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSIPILPSPTAAVSLAVN
        +YFT+LK+VW+E   Y+P CTCGKC+C GVK+++ + Q EY+MSFLMGL++SFA  R Q+LL+DP P INK FSL+SQEE+QR + I  S +        
Subjt:  MYFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSIPILPSPTAAVSLAVN

Query:  QSSRTSSSSSSAGYRQKGGQRNPSQS
        + + T +S+  +G    GG R  + S
Subjt:  QSSRTSSSSSSAGYRQKGGQRNPSQS

A0A6J1DIP8 uncharacterized protein LOC1110203991.2e-2435.86Show/hide
Query:  YFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSIPILPSPTAAVSLAVNQ
        YFT LK++W E  +Y P+CT G+CSC GVK I  F Q E++M FLMGLNESF+  R Q+LLM+P P+IN+ FSL+SQE QQR+I    SP          
Subjt:  YFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSIPILPSPTAAVSLAVNQ

Query:  SSRTSSSSSSAGYRQKGGQRNPSQSVSTVPPMSYGTHSVSSTTANAVSSSIAPPGSSTASLGVPDTLAYALTTDDSVFFKFYADYCDIHEKSTLRTIGKG
        ++  + SSSS+G+ +     +     + +  + Y    VS                             ALT D SV   F  + C + +KS+ + IGK 
Subjt:  SSRTSSSSSSAGYRQKGGQRNPSQSVSTVPPMSYGTHSVSSTTANAVSSSIAPPGSSTASLGVPDTLAYALTTDDSVFFKFYADYCDIHEKSTLRTIGKG

Query:  KFCDGLYLL--EPFAVQSSIVVNAITTRDQTALWHAW
        +   GLYLL  E +A  + +V N        + +H W
Subjt:  KFCDGLYLL--EPFAVQSSIVVNAITTRDQTALWHAW

A0A6J1DLQ9 uncharacterized protein LOC1110221179.8e-3546.07Show/hide
Query:  MYFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSIPILPSPTAAVSLAVN
        MY+T+LK++WDEY++YRP CTCG CSC G + +++FVQFE+LM FLMGLNESFA  RAQILLMDP PSI KAFSLISQEEQQR IP+  +P+ AV LAVN
Subjt:  MYFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSIPILPSPTAAVSLAVN

Query:  QSSRTSSSSSS-------------------------------AGYRQKGGQRNPSQSVSTVPPMSYGTHSVSSTTANAVSSSIAPPGSSTA
        QS  +S+S+S                                +GYR KG Q + + S+++    +  +   S++ + A+ +SI+   +S++
Subjt:  QSSRTSSSSSS-------------------------------AGYRQKGGQRNPSQSVSTVPPMSYGTHSVSSTTANAVSSSIAPPGSSTA

A0A6J1DNP7 uncharacterized protein LOC1110220655.4e-2543.98Show/hide
Query:  YFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSI--PILPSPTAAVSLAV
        YFTRLK++W E   YRPAC+CG+CS  GVKSI+   Q EY+M+FLMGLN SF+  RAQ+LLM+P+P+IN+AF+L++QE QQRSI  P + SPTA+   A 
Subjt:  YFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSI--PILPSPTAAVSLAV

Query:  NQSSRTSSSSSSAGYRQK------------GGQRNPSQSVSTVPPMSYGTHSVSSTTANAVSSSIAPPGSSTASL---GVPDTLAYALTTD
        + SS +  +SSSA + ++            G   +    +   PP  Y +    +T++NA SS  A   S + S    G+ ++LA  LT D
Subjt:  NQSSRTSSSSSSAGYRQK------------GGQRNPSQSVSTVPPMSYGTHSVSSTTANAVSSSIAPPGSSTASL---GVPDTLAYALTTD

A0A6J1E1U3 uncharacterized protein LOC1110251994.6e-2454.24Show/hide
Query:  YFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSI--PILPSPTAAVSLAV
        YFT+LK++W E  +Y  +CTC KCSC GVK+I E+ Q EY+M FLMGLN+SF+  RAQ+LLM+P+PSIN AF+LI+QE QQ +I  P L + TA ++ A 
Subjt:  YFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSI--PILPSPTAAVSLAV

Query:  NQSSRTSSSSSSAGYRQK
        + +    SSSSS+ Y++K
Subjt:  NQSSRTSSSSSSAGYRQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTTTACTCGTCTTAAGAGTGTCTGGGATGAGTATATCACTTATCGGCCTGCTTGTACTTGTGGAAAGTGTTCGTGTGAAGGCGTTAAGTCTATTGATGAGTTTGT
TCAATTTGAGTATCTCATGAGTTTTTTGATGGGATTGAATGAGTCTTTCGCTTCTACTAGGGCACAGATATTACTAATGGATCCGTCCCCCTCAATCAATAAGGCCTTCT
CACTTATCTCTCAGGAAGAACAACAGCGTTCTATTCCTATTTTGCCTTCACCTACTGCAGCTGTGAGTCTTGCGGTGAATCAGTCCTCTCGCACCTCATCTTCATCCTCT
TCGGCTGGTTATCGGCAAAAAGGAGGTCAGCGGAATCCATCGCAATCTGTATCTACAGTCCCTCCAATGAGTTATGGGACACACTCTGTTTCCTCTACCACTGCTAATGC
GGTTTCCTCCTCGATAGCACCACCTGGTTCGTCGACGGCTTCCTTGGGCGTTCCTGATACTTTGGCGTATGCTCTCACCACAGATGATTCTGTTTTTTTTAAATTTTATG
CTGACTACTGTGATATTCACGAAAAGTCCACTTTGAGGACGATTGGTAAGGGTAAGTTTTGTGATGGACTCTATCTACTAGAGCCTTTTGCTGTTCAGTCTTCGATTGTG
GTTAATGCTATCACTACTCGGGATCAAACTGCTTTATGGCATGCGTGGCTTGCTTTTGATGTTATGTCGACTGGAGATCACATTGAGGATATTGATGGCTTTCCAAATAT
GGTTGGTATTGATTTGTCTCTTGTTGCTAGTTCTTCTGATGTGACCCAACATCCTAATGTGACCCCACCTTCTGATGTGACCCAACATACTGATGTGACCCCACCTTCTG
ATGTGAACCAACCTACTGATGTGACTCAACATAATGATGGTGTTGTAATCCAACATCTTGGTGAACCCACACCTATTATCGAGATTCCCCTTACATCTCCTACTAATGAA
GCCTCTGTTTTGCCCATTGTTATGCCATCTGATCGCCATTCAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATTTTACTCGTCTTAAGAGTGTCTGGGATGAGTATATCACTTATCGGCCTGCTTGTACTTGTGGAAAGTGTTCGTGTGAAGGCGTTAAGTCTATTGATGAGTTTGT
TCAATTTGAGTATCTCATGAGTTTTTTGATGGGATTGAATGAGTCTTTCGCTTCTACTAGGGCACAGATATTACTAATGGATCCGTCCCCCTCAATCAATAAGGCCTTCT
CACTTATCTCTCAGGAAGAACAACAGCGTTCTATTCCTATTTTGCCTTCACCTACTGCAGCTGTGAGTCTTGCGGTGAATCAGTCCTCTCGCACCTCATCTTCATCCTCT
TCGGCTGGTTATCGGCAAAAAGGAGGTCAGCGGAATCCATCGCAATCTGTATCTACAGTCCCTCCAATGAGTTATGGGACACACTCTGTTTCCTCTACCACTGCTAATGC
GGTTTCCTCCTCGATAGCACCACCTGGTTCGTCGACGGCTTCCTTGGGCGTTCCTGATACTTTGGCGTATGCTCTCACCACAGATGATTCTGTTTTTTTTAAATTTTATG
CTGACTACTGTGATATTCACGAAAAGTCCACTTTGAGGACGATTGGTAAGGGTAAGTTTTGTGATGGACTCTATCTACTAGAGCCTTTTGCTGTTCAGTCTTCGATTGTG
GTTAATGCTATCACTACTCGGGATCAAACTGCTTTATGGCATGCGTGGCTTGCTTTTGATGTTATGTCGACTGGAGATCACATTGAGGATATTGATGGCTTTCCAAATAT
GGTTGGTATTGATTTGTCTCTTGTTGCTAGTTCTTCTGATGTGACCCAACATCCTAATGTGACCCCACCTTCTGATGTGACCCAACATACTGATGTGACCCCACCTTCTG
ATGTGAACCAACCTACTGATGTGACTCAACATAATGATGGTGTTGTAATCCAACATCTTGGTGAACCCACACCTATTATCGAGATTCCCCTTACATCTCCTACTAATGAA
GCCTCTGTTTTGCCCATTGTTATGCCATCTGATCGCCATTCAACTTGA
Protein sequenceShow/hide protein sequence
MYFTRLKSVWDEYITYRPACTCGKCSCEGVKSIDEFVQFEYLMSFLMGLNESFASTRAQILLMDPSPSINKAFSLISQEEQQRSIPILPSPTAAVSLAVNQSSRTSSSSS
SAGYRQKGGQRNPSQSVSTVPPMSYGTHSVSSTTANAVSSSIAPPGSSTASLGVPDTLAYALTTDDSVFFKFYADYCDIHEKSTLRTIGKGKFCDGLYLLEPFAVQSSIV
VNAITTRDQTALWHAWLAFDVMSTGDHIEDIDGFPNMVGIDLSLVASSSDVTQHPNVTPPSDVTQHTDVTPPSDVNQPTDVTQHNDGVVIQHLGEPTPIIEIPLTSPTNE
ASVLPIVMPSDRHST