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Moc06g30660 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g30660
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr6:23081830..23082102
RNA-Seq ExpressionMoc06g30660
SyntenyMoc06g30660
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136647.1 uncharacterized protein LOC111008302 [Momordica charantia]6.7e-0657.14Show/hide
Query:  PTSDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVF
        P  +   P EELEL+PL S E++++IGTKLGA +R  L +FLRSN+DVF
Subjt:  PTSDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVF

XP_022156048.1 uncharacterized protein LOC111023016 [Momordica charantia]4.4e-1363.77Show/hide
Query:  NDSIDNDEKADSNPGHRMESPTSDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVF
        N + D   +A  +PGHR+ S T DRG  AEE+E +PLT EE+R+NIGTKLG EER SL NFLRSNADVF
Subjt:  NDSIDNDEKADSNPGHRMESPTSDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVF

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]1.8e-1459.26Show/hide
Query:  LDHATSVVLLTNNDSIDNDEKADSNPGHRMESPTSDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVF
        LD    V  L     +  D  A  +PGHR+ S T DRG+PAEE+E +PLT+E+RR+NIGTKLG+EER SL NFLRSNADVF
Subjt:  LDHATSVVLLTNNDSIDNDEKADSNPGHRMESPTSDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVF

XP_022158042.1 uncharacterized protein LOC111024621 [Momordica charantia]1.9e-0850.65Show/hide
Query:  SVVLLTNNDSIDNDEKADSNPGHRMESPT-SDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVF
        S+ L   + ++D   +  S+P  ++ SPT  DRG+P +E+E IPLTS++RR+NIGT+LG ++RASL +FLRSN DVF
Subjt:  SVVLLTNNDSIDNDEKADSNPGHRMESPT-SDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVF

XP_022159205.1 uncharacterized protein LOC111025624 [Momordica charantia]4.4e-0550.98Show/hide
Query:  ESPTSDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVF
        + P   RG PAEELEL+PL   E++++IG++L AE +  L +FL++NADVF
Subjt:  ESPTSDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVF

TrEMBL top hitse value%identityAlignment
A0A6J1C617 Ribonuclease H3.3e-0657.14Show/hide
Query:  PTSDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVF
        P  +   P EELEL+PL S E++++IGTKLGA +R  L +FLRSN+DVF
Subjt:  PTSDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVF

A0A6J1DPJ5 uncharacterized protein LOC1110230162.1e-1363.77Show/hide
Query:  NDSIDNDEKADSNPGHRMESPTSDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVF
        N + D   +A  +PGHR+ S T DRG  AEE+E +PLT EE+R+NIGTKLG EER SL NFLRSNADVF
Subjt:  NDSIDNDEKADSNPGHRMESPTSDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVF

A0A6J1DPX9 uncharacterized protein LOC1110220062.1e-0547.89Show/hide
Query:  TNNDSIDNDEKADSNPGHRMESPTSDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVF
        TN   +   E        R  SP      P EELEL+PL S E+ +NIGTKL A +R  L NFLRSN+DVF
Subjt:  TNNDSIDNDEKADSNPGHRMESPTSDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVF

A0A6J1DVC6 Ribonuclease H8.6e-1559.26Show/hide
Query:  LDHATSVVLLTNNDSIDNDEKADSNPGHRMESPTSDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVF
        LD    V  L     +  D  A  +PGHR+ S T DRG+PAEE+E +PLT+E+RR+NIGTKLG+EER SL NFLRSNADVF
Subjt:  LDHATSVVLLTNNDSIDNDEKADSNPGHRMESPTSDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVF

A0A6J1DW49 uncharacterized protein LOC1110246219.2e-0950.65Show/hide
Query:  SVVLLTNNDSIDNDEKADSNPGHRMESPT-SDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVF
        S+ L   + ++D   +  S+P  ++ SPT  DRG+P +E+E IPLTS++RR+NIGT+LG ++RASL +FLRSN DVF
Subjt:  SVVLLTNNDSIDNDEKADSNPGHRMESPT-SDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAACGTCTCATGCCCTGAGATTAGATCATGCAACTAGTGTTGTGCTCCTGACAAATAACGATTCAATCGATAACGATGAAAAGGCCGACTCGAACCCTGGTCATCG
CATGGAGTCACCCACCTCAGATAGAGGAAAGCCTGCTGAAGAATTAGAGCTGATCCCTCTAACGTCTGAAGAGCGACGAATCAATATTGGAACCAAGTTGGGGGCTGAGG
AAAGAGCTAGTCTCACTAATTTTCTCAGAAGCAACGCTGATGTATTTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAACGTCTCATGCCCTGAGATTAGATCATGCAACTAGTGTTGTGCTCCTGACAAATAACGATTCAATCGATAACGATGAAAAGGCCGACTCGAACCCTGGTCATCG
CATGGAGTCACCCACCTCAGATAGAGGAAAGCCTGCTGAAGAATTAGAGCTGATCCCTCTAACGTCTGAAGAGCGACGAATCAATATTGGAACCAAGTTGGGGGCTGAGG
AAAGAGCTAGTCTCACTAATTTTCTCAGAAGCAACGCTGATGTATTTGTATGA
Protein sequenceShow/hide protein sequence
MVTSHALRLDHATSVVLLTNNDSIDNDEKADSNPGHRMESPTSDRGKPAEELELIPLTSEERRINIGTKLGAEERASLTNFLRSNADVFV