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Moc06g30810 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g30810
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr6:23209440..23210422
RNA-Seq ExpressionMoc06g30810
SyntenyMoc06g30810
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135945.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia]2.3e-2260Show/hide
Query:  FENDVGIHNEKKVELVDVDAPSSAPLYEVNTIRMNASCSTIQASCYRDINRTGDELRLTLEEIAVGSSFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLL
        FENDVGI NEK VE  DV APS APL+EVNT                   RT DEL  T EEIAVGS+F+SKA L+FNLS+F MRLNFEYH+KK TK+LL
Subjt:  FENDVGIHNEKKVELVDVDAPSSAPLYEVNTIRMNASCSTIQASCYRDINRTGDELRLTLEEIAVGSSFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLL

Query:  TVGCWEDACK
        TV C E  C+
Subjt:  TVGCWEDACK

XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]2.2e-0932.11Show/hide
Query:  QNVPNYVPLIPIHSTL-----------------------LGRDEDDE----NDVGYEAEDNDGD-NDKGNDFESGDTKFENDVGIHNEKKVELVDVDAPS
        QNVP+  PL  +HS++                       LG DE +     +DVG   +D D +    G+D E  D   E +    NE    + D D   
Subjt:  QNVPNYVPLIPIHSTL-----------------------LGRDEDDE----NDVGYEAEDNDGD-NDKGNDFESGDTKFENDVGIHNEKKVELVDVDAPS

Query:  SAPLYEVNTIRMNASCSTIQA--SCYRDINRTGDELRLTLEEIAVGSSFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLLTVGCWEDACK
          P+ EV ++  NA C+T++   +    ++  G +  L +++IA+GS FRSK  L F L++FA++ NFE+ VKK T++LL+V C E+ C+
Subjt:  SAPLYEVNTIRMNASCSTIQA--SCYRDINRTGDELRLTLEEIAVGSSFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLLTVGCWEDACK

XP_022156802.1 uncharacterized protein LOC111023635 [Momordica charantia]2.5e-1331.71Show/hide
Query:  MSRLFVSYGGQWNEAQSIYDGGIMGGQNVPNYVPLIPIHSTL------------------------------------LGRDEDD-------ENDVGYEA
        M RLFV YGG+WNEA ++Y+GG MGG +V   +    + S L                                    L  DE+D       EN+V YE 
Subjt:  MSRLFVSYGGQWNEAQSIYDGGIMGGQNVPNYVPLIPIHSTL------------------------------------LGRDEDD-------ENDVGYEA

Query:  EDNDG------------DNDKGNDFESGDT---KFENDVGIHNEKKVELVDVDAPSSAPLYEVNTIRMNASCSTIQASCYRDINR--TGDELRLTLEEIA
        + +D             ++D GN +++G+      E+ +  H E + + V          +E +T+  NA   T++    R +    TG+     + EIA
Subjt:  EDNDG------------DNDKGNDFESGDT---KFENDVGIHNEKKVELVDVDAPSSAPLYEVNTIRMNASCSTIQASCYRDINR--TGDELRLTLEEIA

Query:  VGSSFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLLTVGCWEDACK
        V   FRSK  L F LS+ AM+LNF++ VKK TKTL TVGC E  CK
Subjt:  VGSSFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLLTVGCWEDACK

XP_022158743.1 PKS-NRPS hybrid synthetase CHGG_01239-like [Momordica charantia]1.6e-3663.64Show/hide
Query:  DEDDENDVGY--EAEDNDGDNDKGNDFESGDTKFENDVGIHNEKKVELVDVDAPSSAPLYEVNTIRMNASCSTIQASCYRDINRTGDELRLTLEEIAVGS
        DEDD+ND GY  EAEDNDGDN+ G+ FE  D +F NDVGI NE +VE +DV A SSAPL+E+N + MNA C+T QASC RDI++T DEL LT E+I V S
Subjt:  DEDDENDVGY--EAEDNDGDNDKGNDFESGDTKFENDVGIHNEKKVELVDVDAPSSAPLYEVNTIRMNASCSTIQASCYRDINRTGDELRLTLEEIAVGS

Query:  SFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLLTVGCWEDACK
        +F+S   L+FN S+FAM+LNFEY VKK TK+LLTVGC  D CK
Subjt:  SFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLLTVGCWEDACK

XP_022159183.1 uncharacterized protein LOC111025603 [Momordica charantia]4.9e-1758.23Show/hide
Query:  IRMNASCSTIQASCYRDINRTGDELRLTLEEIAVGSSFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLLTVGCWEDACK
        +  NA C+T QAS  R++ RT DE+ L++++IA+GS+FRSK  L+F LS+FAMR+NFEYHVKK TK+L  +GC ED CK
Subjt:  IRMNASCSTIQASCYRDINRTGDELRLTLEEIAVGSSFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLLTVGCWEDACK

TrEMBL top hitse value%identityAlignment
A0A6J1C2G8 protein FAR-RED ELONGATED HYPOCOTYL 3-like1.1e-2260Show/hide
Query:  FENDVGIHNEKKVELVDVDAPSSAPLYEVNTIRMNASCSTIQASCYRDINRTGDELRLTLEEIAVGSSFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLL
        FENDVGI NEK VE  DV APS APL+EVNT                   RT DEL  T EEIAVGS+F+SKA L+FNLS+F MRLNFEYH+KK TK+LL
Subjt:  FENDVGIHNEKKVELVDVDAPSSAPLYEVNTIRMNASCSTIQASCYRDINRTGDELRLTLEEIAVGSSFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLL

Query:  TVGCWEDACK
        TV C E  C+
Subjt:  TVGCWEDACK

A0A6J1DLB0 uncharacterized protein LOC1110219691.1e-0932.11Show/hide
Query:  QNVPNYVPLIPIHSTL-----------------------LGRDEDDE----NDVGYEAEDNDGD-NDKGNDFESGDTKFENDVGIHNEKKVELVDVDAPS
        QNVP+  PL  +HS++                       LG DE +     +DVG   +D D +    G+D E  D   E +    NE    + D D   
Subjt:  QNVPNYVPLIPIHSTL-----------------------LGRDEDDE----NDVGYEAEDNDGD-NDKGNDFESGDTKFENDVGIHNEKKVELVDVDAPS

Query:  SAPLYEVNTIRMNASCSTIQA--SCYRDINRTGDELRLTLEEIAVGSSFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLLTVGCWEDACK
          P+ EV ++  NA C+T++   +    ++  G +  L +++IA+GS FRSK  L F L++FA++ NFE+ VKK T++LL+V C E+ C+
Subjt:  SAPLYEVNTIRMNASCSTIQA--SCYRDINRTGDELRLTLEEIAVGSSFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLLTVGCWEDACK

A0A6J1DSY0 uncharacterized protein LOC1110236351.2e-1331.71Show/hide
Query:  MSRLFVSYGGQWNEAQSIYDGGIMGGQNVPNYVPLIPIHSTL------------------------------------LGRDEDD-------ENDVGYEA
        M RLFV YGG+WNEA ++Y+GG MGG +V   +    + S L                                    L  DE+D       EN+V YE 
Subjt:  MSRLFVSYGGQWNEAQSIYDGGIMGGQNVPNYVPLIPIHSTL------------------------------------LGRDEDD-------ENDVGYEA

Query:  EDNDG------------DNDKGNDFESGDT---KFENDVGIHNEKKVELVDVDAPSSAPLYEVNTIRMNASCSTIQASCYRDINR--TGDELRLTLEEIA
        + +D             ++D GN +++G+      E+ +  H E + + V          +E +T+  NA   T++    R +    TG+     + EIA
Subjt:  EDNDG------------DNDKGNDFESGDT---KFENDVGIHNEKKVELVDVDAPSSAPLYEVNTIRMNASCSTIQASCYRDINR--TGDELRLTLEEIA

Query:  VGSSFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLLTVGCWEDACK
        V   FRSK  L F LS+ AM+LNF++ VKK TKTL TVGC E  CK
Subjt:  VGSSFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLLTVGCWEDACK

A0A6J1DWY9 PKS-NRPS hybrid synthetase CHGG_01239-like7.8e-3763.64Show/hide
Query:  DEDDENDVGY--EAEDNDGDNDKGNDFESGDTKFENDVGIHNEKKVELVDVDAPSSAPLYEVNTIRMNASCSTIQASCYRDINRTGDELRLTLEEIAVGS
        DEDD+ND GY  EAEDNDGDN+ G+ FE  D +F NDVGI NE +VE +DV A SSAPL+E+N + MNA C+T QASC RDI++T DEL LT E+I V S
Subjt:  DEDDENDVGY--EAEDNDGDNDKGNDFESGDTKFENDVGIHNEKKVELVDVDAPSSAPLYEVNTIRMNASCSTIQASCYRDINRTGDELRLTLEEIAVGS

Query:  SFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLLTVGCWEDACK
        +F+S   L+FN S+FAM+LNFEY VKK TK+LLTVGC  D CK
Subjt:  SFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLLTVGCWEDACK

A0A6J1DY41 uncharacterized protein LOC1110256032.4e-1758.23Show/hide
Query:  IRMNASCSTIQASCYRDINRTGDELRLTLEEIAVGSSFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLLTVGCWEDACK
        +  NA C+T QAS  R++ RT DE+ L++++IA+GS+FRSK  L+F LS+FAMR+NFEYHVKK TK+L  +GC ED CK
Subjt:  IRMNASCSTIQASCYRDINRTGDELRLTLEEIAVGSSFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLLTVGCWEDACK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTTCACAACCGAGTTCTTCATGTCAATGTCTCGTCTGTTTGTTAGTTACGGTGGTCAGTGGAATGAGGCGCAATCTATCTATGACGGTGGAATTATGGGAGGGCA
AAATGTTCCTAATTATGTTCCCTTAATTCCTATTCATTCCACGCTACTGGGTCGGGACGAGGATGATGAGAATGACGTGGGGTACGAGGCTGAGGATAACGATGGGGATA
ATGACAAGGGTAATGATTTTGAGTCTGGTGATACTAAGTTTGAGAATGATGTTGGGATTCACAATGAAAAGAAGGTGGAGCTAGTAGATGTAGATGCCCCTTCTTCTGCA
CCCTTATATGAAGTAAACACGATACGTATGAATGCATCTTGTTCTACTATTCAAGCTTCTTGCTACAGAGATATCAATAGGACAGGTGATGAACTTAGGTTGACCTTAGA
AGAGATTGCAGTAGGGAGTTCTTTCCGATCAAAGGCAACATTGGAGTTCAATCTATCGATGTTCGCAATGAGATTGAATTTTGAATATCACGTGAAGAAATTTACGAAGA
CTTTGTTAACTGTCGGATGCTGGGAGGATGCATGCAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGATGTTCACAACCGAGTTCTTCATGTCAATGTCTCGTCTGTTTGTTAGTTACGGTGGTCAGTGGAATGAGGCGCAATCTATCTATGACGGTGGAATTATGGGAGGGCA
AAATGTTCCTAATTATGTTCCCTTAATTCCTATTCATTCCACGCTACTGGGTCGGGACGAGGATGATGAGAATGACGTGGGGTACGAGGCTGAGGATAACGATGGGGATA
ATGACAAGGGTAATGATTTTGAGTCTGGTGATACTAAGTTTGAGAATGATGTTGGGATTCACAATGAAAAGAAGGTGGAGCTAGTAGATGTAGATGCCCCTTCTTCTGCA
CCCTTATATGAAGTAAACACGATACGTATGAATGCATCTTGTTCTACTATTCAAGCTTCTTGCTACAGAGATATCAATAGGACAGGTGATGAACTTAGGTTGACCTTAGA
AGAGATTGCAGTAGGGAGTTCTTTCCGATCAAAGGCAACATTGGAGTTCAATCTATCGATGTTCGCAATGAGATTGAATTTTGAATATCACGTGAAGAAATTTACGAAGA
CTTTGTTAACTGTCGGATGCTGGGAGGATGCATGCAAATAG
Protein sequenceShow/hide protein sequence
MMFTTEFFMSMSRLFVSYGGQWNEAQSIYDGGIMGGQNVPNYVPLIPIHSTLLGRDEDDENDVGYEAEDNDGDNDKGNDFESGDTKFENDVGIHNEKKVELVDVDAPSSA
PLYEVNTIRMNASCSTIQASCYRDINRTGDELRLTLEEIAVGSSFRSKATLEFNLSMFAMRLNFEYHVKKFTKTLLTVGCWEDACK