CuGenDBv2

Gene ID	Moc06g30980
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	leukocyte receptor cluster member 1
Genome location	chr6:23340969..23342029
RNA-Seq Expression	Moc06g30980
Synteny	Moc06g30980
Gene Ontology terms	NA
InterPro domains	IPR019339 - CBF1-interacting co-repressor CIR, N-terminal domain

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004152406.1 leukocyte receptor cluster member 1 homolog [Cucumis sativus]

9.5e-94

85.71

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSEN-R
        MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAAKEEQLKREQ RKRDAE+RLEQLRTARGLAPV D ++P+E+DLKPGHINLFEGIKIFDPI GS+N  
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSEN-R

Query:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERPM--DDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIA
        VEDGSKKKRMKKEEVEK+VIT EDEKYKLGYGVAGKGVK+PWYLERP   DD+++ END S RV SG+VKKGEKKTLEELRAERL+REQKEKGRERALIA
Subjt:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERPM--DDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIA

Query:  ERSRKIGSAFREGDSSSRRWKSRR
        ERSRK G A REGD SSRRWKSRR
Subjt:  ERSRKIGSAFREGDSSSRRWKSRR

XP_008437093.1 PREDICTED: leukocyte receptor cluster member 1 homolog [Cucumis melo]

1.3e-95

87.44

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSEN-R
        MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAAKEEQLKREQARKRDAE+RLEQLRTARGLAPV D ++P+E+DLKPGHINLFEGIKIFDPI GS+N  
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSEN-R

Query:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE
        VEDGSKKKRMKKEEVEKKVIT EDEKYKLGYGVAGKGVK+PWYLERP  DD+++ END SSRV +G+VKKGEKKTLEELRAERL+REQKEKGRERALIAE
Subjt:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE

Query:  RSRKIGSAFREGDSSSRRWKSRR
        RSRK G A REGDSSSRRWKSRR
Subjt:  RSRKIGSAFREGDSSSRRWKSRR

XP_022154825.1 leukocyte receptor cluster member 1 [Momordica charantia]

2.6e-112

100

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSENRV
        MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSENRV
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSENRV

Query:  EDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERPMDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAERS
        EDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERPMDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAERS
Subjt:  EDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERPMDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAERS

Query:  RKIGSAFREGDSSSRRWKSRR
        RKIGSAFREGDSSSRRWKSRR
Subjt:  RKIGSAFREGDSSSRRWKSRR

XP_038874709.1 leukocyte receptor cluster member 1 homolog isoform X1 [Benincasa hispida]

1.9e-94

87.89

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSEN-R
        MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAE+RLEQLRTARGLA V D A+P+E+DLKPGHINLFEGIKIFDP+ GSEN  
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSEN-R

Query:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE
        VEDGSK+KRMKKEEVEKKVIT EDEKYKLGYGVAGKGVKLPWYLERP  DD++SDEND SSRV SG+VKKGEKKTLEELRAERL+REQKEKGRERALIA 
Subjt:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE

Query:  RSRKIGSAFREGDSSSRRWKSRR
          RK G+A REGDSSSRRWKSRR
Subjt:  RSRKIGSAFREGDSSSRRWKSRR

XP_038874710.1 leukocyte receptor cluster member 1 homolog isoform X2 [Benincasa hispida]

1.9e-94

87.89

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSEN-R
        MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAE+RLEQLRTARGLA V D A+P+E+DLKPGHINLFEGIKIFDP+ GSEN  
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSEN-R

Query:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE
        VEDGSK+KRMKKEEVEKKVIT EDEKYKLGYGVAGKGVKLPWYLERP  DD++SDEND SSRV SG+VKKGEKKTLEELRAERL+REQKEKGRERALIA 
Subjt:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE

Query:  RSRKIGSAFREGDSSSRRWKSRR
          RK G+A REGDSSSRRWKSRR
Subjt:  RSRKIGSAFREGDSSSRRWKSRR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KKV3 Cir_N domain-containing protein

4.6e-94

85.71

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSEN-R
        MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAAKEEQLKREQ RKRDAE+RLEQLRTARGLAPV D ++P+E+DLKPGHINLFEGIKIFDPI GS+N  
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSEN-R

Query:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERPM--DDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIA
        VEDGSKKKRMKKEEVEK+VIT EDEKYKLGYGVAGKGVK+PWYLERP   DD+++ END S RV SG+VKKGEKKTLEELRAERL+REQKEKGRERALIA
Subjt:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERPM--DDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIA

Query:  ERSRKIGSAFREGDSSSRRWKSRR
        ERSRK G A REGD SSRRWKSRR
Subjt:  ERSRKIGSAFREGDSSSRRWKSRR

A0A1S3AT65 leukocyte receptor cluster member 1 homolog

6.4e-96

87.44

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSEN-R
        MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAAKEEQLKREQARKRDAE+RLEQLRTARGLAPV D ++P+E+DLKPGHINLFEGIKIFDPI GS+N  
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSEN-R

Query:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE
        VEDGSKKKRMKKEEVEKKVIT EDEKYKLGYGVAGKGVK+PWYLERP  DD+++ END SSRV +G+VKKGEKKTLEELRAERL+REQKEKGRERALIAE
Subjt:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE

Query:  RSRKIGSAFREGDSSSRRWKSRR
        RSRK G A REGDSSSRRWKSRR
Subjt:  RSRKIGSAFREGDSSSRRWKSRR

A0A5A7TDI4 Leukocyte receptor cluster member 1-like protein

6.6e-93

87.16

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSEN-R
        MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAAKEEQLKREQARKRDAE+RLEQLRTARGLAPV D ++P+E+DLKPGHINLFEGIKIFDPI GS+N  
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSEN-R

Query:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE
        VEDGSKKKRMKKEEVEKKVIT EDEKYKLGYGVAGKGVK+PWYLERP  DD+++ END SSRV +G+VKKGEKKTLEELRAERL+REQKEKGRERALIAE
Subjt:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE

Query:  RSRKIGSAFREGDSSSRR
        RSRK G A REGDSSSRR
Subjt:  RSRKIGSAFREGDSSSRR

A0A6J1DKR3 leukocyte receptor cluster member 1

1.3e-112

100

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSENRV
        MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSENRV
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSENRV

Query:  EDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERPMDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAERS
        EDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERPMDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAERS
Subjt:  EDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERPMDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAERS

Query:  RKIGSAFREGDSSSRRWKSRR
        RKIGSAFREGDSSSRRWKSRR
Subjt:  RKIGSAFREGDSSSRRWKSRR

A0A6J1I3I0 leukocyte receptor cluster member 1 homolog

3.3e-92

85.2

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSENR-
        MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQ+RKRDAE+RLEQLRTARG+APV D  +P+E+DLKPGH+NLFEGIKIFDP+  SEN  
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSENR-

Query:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLE-RPMDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE
         EDGSKKKRMKKEEVEK+VITAEDEKYKLGYGVAGKGVKLPWYLE R  DD++SD+N SSSRVVS +VKKG KKTLEELRAERL+REQKEKGRERALIAE
Subjt:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLE-RPMDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE

Query:  RSRKIGSAFREGDSSSRRWKSRR
        RS K G+A RE DSSSRRWKSRR
Subjt:  RSRKIGSAFREGDSSSRRWKSRR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G03010.1 Family of unknown function (DUF577)

4.2e-07

40.78

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Query:  VRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPV-----------NDVARPLESDLKPGHINLFEGIKIFDPINGSENRVEDGSKKKRMKKEEV
        VR+DEEAAA+EEQ+KRE ARKRDAE RLE LR  RGLAP+           ND    +  +   G    +E  K          ++      K +K+E V
Subjt:  VRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPV-----------NDVARPLESDLKPGHINLFEGIKIFDPINGSENRVEDGSKKKRMKKEEV

Query:  EKK
        EK+
Subjt:  EKK

AT4G16530.1 Family of unknown function (DUF577)

5.8e-49

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAP---------------------VNDVARPLES----D
        MGGHGGLNILPQKRWNVYN++NREKVR++EEAAA+EEQ+KRE+ARKRDAE RLE LR  RGLAP                     V   A  +ES    +
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAP---------------------VNDVARPLES----D

Query:  LKPGHINLFEGIKIFDPINGSEN---RVEDGSKKKRMKKEEVEKKVITAED----------EKYKLGYGVAGKGVKLPWYLERPMDDSDS----DENDSS
         K GHINLFEGI+IFDPI   +N     E+  ++K+M+KE       +A+D          EKY+LGYGVAGKGVK PWYLE+  D++DS    D++   
Subjt:  LKPGHINLFEGIKIFDPINGSEN---RVEDGSKKKRMKKEEVEKKVITAED----------EKYKLGYGVAGKGVKLPWYLERPMDDSDS----DENDSS

Query:  SRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAERSRKIGSAFR
            +   K   KK+L+ELR ERL+RE+ EK RERAL  ++S++ G   R
Subjt:  SRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAERSRKIGSAFR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGAGGTCATGGAGGTCTGAATATTCTTCCTCAAAAGCGATGGAATGTGTACAACTACGAGAACAGGGAGAAAGTGCGGCGAGATGAAGAAGCCGCAGCAAAAGAAGA
ACAGCTTAAACGCGAGCAGGCAAGGAAACGGGATGCCGAGTATCGTCTTGAGCAGCTTCGTACTGCACGGGGTTTAGCTCCAGTGAATGACGTTGCGAGGCCTCTAGAAT
CAGACCTGAAACCTGGTCACATAAATCTATTTGAAGGAATCAAGATTTTTGATCCAATTAATGGTTCAGAGAACAGAGTTGAAGATGGATCTAAGAAGAAGAGGATGAAG
AAGGAAGAAGTGGAAAAAAAGGTTATCACAGCTGAAGACGAGAAGTATAAGTTAGGTTATGGTGTTGCTGGAAAAGGAGTCAAGTTGCCATGGTACCTTGAGAGGCCTAT
GGATGATTCTGATAGCGATGAAAATGACAGTTCATCGAGAGTGGTGAGTGGGGATGTAAAAAAAGGAGAAAAGAAAACCTTGGAAGAACTGAGAGCCGAGCGTTTGAGGC
GAGAGCAGAAGGAGAAGGGAAGGGAGCGTGCTCTAATTGCAGAGAGAAGCCGGAAGATCGGGTCAGCTTTTAGAGAAGGAGATTCATCATCCAGGAGGTGGAAATCCAGA
CGATAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPINGSENRVEDGSKKKRMK
KEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERPMDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAERSRKIGSAFREGDSSSRRWKSR
R

Moc06g30980 (gene) of Bitter gourd (OHB3-1) v2 genome