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Moc06g31370 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g31370
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr6:23586441..23588016
RNA-Seq ExpressionMoc06g31370
SyntenyMoc06g31370
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141796.1 uncharacterized protein LOC111012081 [Momordica charantia]3.2e-2298.31Show/hide
Query:  PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLRVAH
        PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQL+VAH
Subjt:  PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLRVAH
XP_022149419.1 uncharacterized protein LOC111017849 [Momordica charantia]3.5e-2194.92Show/hide
Query:  PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLRVAH
        PARSISTYSQLRREFLAQF SRHYDKKTATHLATI+QKEGETLREYVTRFQEEQL+VAH
Subjt:  PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLRVAH
XP_022151292.1 uncharacterized protein LOC111019256 [Momordica charantia]6.0e-2191.53Show/hide
Query:  PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLRVAH
        PARSISTYSQLR+EF++QFSSRHYD+KTATHLATIRQKEGETLREYVTRFQEEQL+VAH
Subjt:  PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLRVAH
XP_022152033.1 uncharacterized protein LOC111019842 [Momordica charantia]2.7e-2194.92Show/hide
Query:  PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLRVAH
        PARSISTYSQLRREFLAQFSSRHYDK+TATHLATIRQKEGETLREYVTRFQEEQL+V H
Subjt:  PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLRVAH
XP_022156542.1 uncharacterized protein LOC111023421 [Momordica charantia]1.2e-2196.61Show/hide
Query:  PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLRVAH
        P RSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQL+VAH
Subjt:  PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLRVAH
TrEMBL top hitse value%identityAlignment
A0A6J1CKB3 uncharacterized protein LOC1110120811.5e-2298.31Show/hide
Query:  PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLRVAH
        PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQL+VAH
Subjt:  PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLRVAH
A0A6J1D701 uncharacterized protein LOC1110178491.7e-2194.92Show/hide
Query:  PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLRVAH
        PARSISTYSQLRREFLAQF SRHYDKKTATHLATI+QKEGETLREYVTRFQEEQL+VAH
Subjt:  PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLRVAH
A0A6J1DD31 uncharacterized protein LOC1110192562.9e-2191.53Show/hide
Query:  PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLRVAH
        PARSISTYSQLR+EF++QFSSRHYD+KTATHLATIRQKEGETLREYVTRFQEEQL+VAH
Subjt:  PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLRVAH
A0A6J1DDS5 uncharacterized protein LOC1110198421.3e-2194.92Show/hide
Query:  PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLRVAH
        PARSISTYSQLRREFLAQFSSRHYDK+TATHLATIRQKEGETLREYVTRFQEEQL+V H
Subjt:  PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLRVAH
A0A6J1DS95 uncharacterized protein LOC1110234215.8e-2296.61Show/hide
Query:  PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLRVAH
        P RSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQL+VAH
Subjt:  PARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLRVAH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGCGCCAGGCGCCTGGGAAGCCTGCAGAAAAACTGGTTTTCTTCCAACTTTGCCCTTAATGAAACGCGTCTTCCAATGCGTTTTGGTGGTTCCAACCGA
TGCATACGTGTAGAAGAAGTGTTCCACTATCAGTTTGAGCACGATTTGTCACCAGCCAGGTCGATCTCGACCTACTCTCAGCTGAGAAGGGAGTTCCTCGCCCAG
TTCTCTTCTCGGCATTATGACAAAAAGACAGCGACCCATCTCGCCACCATCAGACAGAAGGAGGGTGAGACGCTGCGAGAATATGTCACCAGATTCCAGGAGGAG
CAGTTGAGGGTCGCACATGCTCCGATGACTCGGTCATGTGCTATTTTCTCACCGGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGCGCCAGGCGCCTGGGAAGCCTGCAGAAAAACTGGTTTTCTTCCAACTTTGCCCTTAATGAAACGCGTCTTCCAATGCGTTTTGGTGGTTCCAACCGA
TGCATACGTGTAGAAGAAGTGTTCCACTATCAGTTTGAGCACGATTTGTCACCAGCCAGGTCGATCTCGACCTACTCTCAGCTGAGAAGGGAGTTCCTCGCCCAG
TTCTCTTCTCGGCATTATGACAAAAAGACAGCGACCCATCTCGCCACCATCAGACAGAAGGAGGGTGAGACGCTGCGAGAATATGTCACCAGATTCCAGGAGGAG
CAGTTGAGGGTCGCACATGCTCCGATGACTCGGTCATGTGCTATTTTCTCACCGGTCTAG
Protein sequenceShow/hide protein sequence
MGGARRLGSLQKNWFSSNFALNETRLPMRFGGSNRCIRVEEVFHYQFEHDLSPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEE
QLRVAHAPMTRSCAIFSPV