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Moc06g31970 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g31970
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:24061071..24064917
RNA-Seq ExpressionMoc06g31970
SyntenyMoc06g31970
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.6e-2350.48Show/hide
Query:  CVTAKDFDSRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALLLLVSPSVGDQLDTMAFAHCSFWVQVHNISINCL
        CV AK   S++ + EAI SVMK++WRVH+ TRFE +  N++VI F+SL EK+R+L+SGPW F+K+LL+L SP+  +Q   M F  C+FW+Q+HNI   C+
Subjt:  CVTAKDFDSRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALLLLVSPSVGDQLDTMAFAHCSFWVQVHNISINCL

Query:  TCDVA
        + ++A
Subjt:  TCDVA

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]1.1e-1644.33Show/hide
Query:  SRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALLLLVSPSVGDQLDTMAFAHCSFWVQVHNISINCLTCDVA
        S++ ++EA  SVMK++W+VH  T  E    N++VI F+S+ EKNR+L SGPW F+ +LL+L SP+  DQ   M F   + W+Q+H I   C+  D+A
Subjt:  SRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALLLLVSPSVGDQLDTMAFAHCSFWVQVHNISINCLTCDVA

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]1.3e-1740Show/hide
Query:  CVTAKDFDSRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALLLLVSPSVGDQLDTMAFAHCSFWVQVHNISINCL
        C   K   S++  +EA  SVMK +W++H+ TR E    N++VI F+++ EK R+ + GPW FDK+LL+LV  +  ++   +  + C+FWVQ+H I+  C+
Subjt:  CVTAKDFDSRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALLLLVSPSVGDQLDTMAFAHCSFWVQVHNISINCL

Query:  TCDVA
        T D+A
Subjt:  TCDVA

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]2.3e-1943.81Show/hide
Query:  CVTAKDFDSRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALLLLVSPSVGDQLDTMAFAHCSFWVQVHNISINCL
        C   K   S++ + +A+ SVMK +W++H  TR E    N++VI F++++EK R+L+SGPW FDK+L +LVSP+  D+   + F  C+FWVQ+H I    L
Subjt:  CVTAKDFDSRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALLLLVSPSVGDQLDTMAFAHCSFWVQVHNISINCL

Query:  TCDVA
        T D+A
Subjt:  TCDVA

XP_024948586.1 uncharacterized protein LOC112495914 [Citrus sinensis]2.0e-1532.65Show/hide
Query:  LRVARKVERKEKSGKLSKTTGFCPEWPEGNPFNCVTAKDFDSRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALL
        +R    V  KE+ G L    G      E    NC+  K   ++  N E + + M+  WR   + + E + +N+F+ +F +  EK R+L  GPW FD+ALL
Subjt:  LRVARKVERKEKSGKLSKTTGFCPEWPEGNPFNCVTAKDFDSRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALL

Query:  LLVSPSVGDQLDTMAFAHCSFWVQVHNISINCLTCDVAATGSEKILR
        +L  P+    + + +F H SFWVQ+HNI I C+  +      EK+++
Subjt:  LLVSPSVGDQLDTMAFAHCSFWVQVHNISINCLTCDVAATGSEKILR

TrEMBL top hitse value%identityAlignment
A0A5C7HA63 Uncharacterized protein1.7e-1530.13Show/hide
Query:  CVTAKDFDSRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALLLLVSPSVGDQLDTMAFAHCSFWVQVHNISINCL
        C+  K F ++  N  A   VM +IWRV+ +   E    N+FV+ F++L ++ RIL  GPW FD+A+++   PS    +  M F+   FW+Q+HN+ + C+
Subjt:  CVTAKDFDSRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALLLLVSPSVGDQLDTMAFAHCSFWVQVHNISINCL

Query:  TCDVA-----ATGSEKILRCARGSEAVKEYLR---IVELCAGLLCCGLSELVIVGK
        T D+        G  + +      E    Y+R   ++ +   L+ C   +L+  GK
Subjt:  TCDVA-----ATGSEKILRCARGSEAVKEYLR---IVELCAGLLCCGLSELVIVGK

A0A6J1D765 uncharacterized protein LOC1110179027.6e-2450.48Show/hide
Query:  CVTAKDFDSRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALLLLVSPSVGDQLDTMAFAHCSFWVQVHNISINCL
        CV AK   S++ + EAI SVMK++WRVH+ TRFE +  N++VI F+SL EK+R+L+SGPW F+K+LL+L SP+  +Q   M F  C+FW+Q+HNI   C+
Subjt:  CVTAKDFDSRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALLLLVSPSVGDQLDTMAFAHCSFWVQVHNISINCL

Query:  TCDVA
        + ++A
Subjt:  TCDVA

A0A6J1DP89 uncharacterized protein LOC1110229325.3e-1744.33Show/hide
Query:  SRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALLLLVSPSVGDQLDTMAFAHCSFWVQVHNISINCLTCDVA
        S++ ++EA  SVMK++W+VH  T  E    N++VI F+S+ EKNR+L SGPW F+ +LL+L SP+  DQ   M F   + W+Q+H I   C+  D+A
Subjt:  SRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALLLLVSPSVGDQLDTMAFAHCSFWVQVHNISINCLTCDVA

A0A6J1DVS4 uncharacterized protein LOC1110235556.2e-1840Show/hide
Query:  CVTAKDFDSRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALLLLVSPSVGDQLDTMAFAHCSFWVQVHNISINCL
        C   K   S++  +EA  SVMK +W++H+ TR E    N++VI F+++ EK R+ + GPW FDK+LL+LV  +  ++   +  + C+FWVQ+H I+  C+
Subjt:  CVTAKDFDSRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALLLLVSPSVGDQLDTMAFAHCSFWVQVHNISINCL

Query:  TCDVA
        T D+A
Subjt:  TCDVA

A0A6J1DYG3 uncharacterized protein LOC1110246761.1e-1943.81Show/hide
Query:  CVTAKDFDSRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALLLLVSPSVGDQLDTMAFAHCSFWVQVHNISINCL
        C   K   S++ + +A+ SVMK +W++H  TR E    N++VI F++++EK R+L+SGPW FDK+L +LVSP+  D+   + F  C+FWVQ+H I    L
Subjt:  CVTAKDFDSRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALLLLVSPSVGDQLDTMAFAHCSFWVQVHNISINCL

Query:  TCDVA
        T D+A
Subjt:  TCDVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGCGAGTTGCGCGCAAGGTGGAGAGGAAGGAGAAATCGGGAAAATTGAGCAAAACGACCGGGTTTTGTCCTGAATGGCCAGAAGGGAATCCATTCAATTGTGT
GACGGCCAAGGATTTCGACAGTCGTAAGACTAATCTTGAGGCGATCTGCTCTGTTATGAAAACCATTTGGCGAGTGCACCACGATACCCGTTTTGAAGTAGTTCGTGAGA
ATGTTTTTGTTATTCAATTTCGTTCGCTGATGGAAAAGAATCGGATTTTGAATTCGGGACCCTGGATATTTGACAAAGCTCTACTACTATTGGTCTCTCCTTCCGTCGGG
GATCAGCTGGACACTATGGCATTTGCCCATTGCTCTTTCTGGGTGCAGGTTCACAATATCTCGATTAATTGTTTGACCTGTGATGTGGCTGCTACTGGGAGTGAGAAAAT
CCTTAGGTGTGCCCGCGGGTCTGAAGCCGTGAAGGAGTACTTGAGGATTGTAGAGCTTTGTGCCGGACTACTGTGCTGTGGGTTGTCGGAACTTGTGATCGTCGGGAAAC
GTGTGCAATCGGAGTATCGTCGGGGTCGCCGGTGTGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGCGAGTTGCGCGCAAGGTGGAGAGGAAGGAGAAATCGGGAAAATTGAGCAAAACGACCGGGTTTTGTCCTGAATGGCCAGAAGGGAATCCATTCAATTGTGT
GACGGCCAAGGATTTCGACAGTCGTAAGACTAATCTTGAGGCGATCTGCTCTGTTATGAAAACCATTTGGCGAGTGCACCACGATACCCGTTTTGAAGTAGTTCGTGAGA
ATGTTTTTGTTATTCAATTTCGTTCGCTGATGGAAAAGAATCGGATTTTGAATTCGGGACCCTGGATATTTGACAAAGCTCTACTACTATTGGTCTCTCCTTCCGTCGGG
GATCAGCTGGACACTATGGCATTTGCCCATTGCTCTTTCTGGGTGCAGGTTCACAATATCTCGATTAATTGTTTGACCTGTGATGTGGCTGCTACTGGGAGTGAGAAAAT
CCTTAGGTGTGCCCGCGGGTCTGAAGCCGTGAAGGAGTACTTGAGGATTGTAGAGCTTTGTGCCGGACTACTGTGCTGTGGGTTGTCGGAACTTGTGATCGTCGGGAAAC
GTGTGCAATCGGAGTATCGTCGGGGTCGCCGGTGTGGGTGA
Protein sequenceShow/hide protein sequence
MFLRVARKVERKEKSGKLSKTTGFCPEWPEGNPFNCVTAKDFDSRKTNLEAICSVMKTIWRVHHDTRFEVVRENVFVIQFRSLMEKNRILNSGPWIFDKALLLLVSPSVG
DQLDTMAFAHCSFWVQVHNISINCLTCDVAATGSEKILRCARGSEAVKEYLRIVELCAGLLCCGLSELVIVGKRVQSEYRRGRRCG