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Moc06g32000 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g32000
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionZf-CCHC domain-containing protein
Genome locationchr6:24124505..24126629
RNA-Seq ExpressionMoc06g32000
SyntenyMoc06g32000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047744.1 microtubule-associated protein 1B isoform X1 [Cucumis melo var. makuwa]1.9e-0628.35Show/hide
Query:  MAGKKSVN-TGNSSLVNNEMEQVSILSPRSSTARLLSVEGEVKTIQQDVGEIKQILEIIHEKLEALRSQQLLVARFSGLRADIKEQIALQPIGISMKLFQ
        MAG++  N     +    E+E+++ LS R ST RLL++E  +  + + +  +   L+ + ++ E + + +L   + S  RA              M   +
Subjt:  MAGKKSVN-TGNSSLVNNEMEQVSILSPRSSTARLLSVEGEVKTIQQDVGEIKQILEIIHEKLEALRSQQLLVARFSGLRADIKEQIALQPIGISMKLFQ

Query:  QQPPLKNRLVIASRSNIQEETIGNMEGHPKRITLLAINMSDEDEVQEDSNEELDEDIDYAEPDEGDPVSCVLQRVLLTPKSEVAYQRRALFKTR
        +Q   K      S S + +E       +P+R T+      DED    +++ E +E+ +  E D+GD + C++QRVL+TPK E   QR +LFKTR
Subjt:  QQPPLKNRLVIASRSNIQEETIGNMEGHPKRITLLAINMSDEDEVQEDSNEELDEDIDYAEPDEGDPVSCVLQRVLLTPKSEVAYQRRALFKTR

KAA0048718.1 hypothetical protein E6C27_scaffold43G00100 [Cucumis melo var. makuwa]6.7e-0447.37Show/hide
Query:  MEGH-----PKRITLLAINMSDEDEVQEDSNEELDEDIDYAEPDEGDPVSCVLQRVLLTPKSEVAYQRR-ALFKTR
        +EGH     PKR T +AI   +ED ++E   +   E++   EPDEG+ +SCVLQRVL+ PKS+ ++Q+R +LFKTR
Subjt:  MEGH-----PKRITLLAINMSDEDEVQEDSNEELDEDIDYAEPDEGDPVSCVLQRVLLTPKSEVAYQRR-ALFKTR

TYK27246.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]1.8e-0450.75Show/hide
Query:  PKRITLLAINMSDEDEVQEDSNEELDEDIDYAEPDEGDPVSCVLQRVLLTPKSEVAYQRR-ALFKTR
        PKR T +AI   DED ++E    + D D +  EPDEG+ +SCVLQRVL+ PK+++++Q+R +LFKTR
Subjt:  PKRITLLAINMSDEDEVQEDSNEELDEDIDYAEPDEGDPVSCVLQRVLLTPKSEVAYQRR-ALFKTR

XP_040994264.1 uncharacterized protein LOC121240799 [Juglans microcarpa x Juglans regia]3.0e-0447.46Show/hide
Query:  AINMSDEDEVQEDSNEELDEDIDYAEPDEGDPVSCVLQRVLLTPKSEVAYQRRALFKTR
        ++N+ D D+  ++S++E +ED ++ E DEGD V+CV+QR+LL PK E   QR  +FKTR
Subjt:  AINMSDEDEVQEDSNEELDEDIDYAEPDEGDPVSCVLQRVLLTPKSEVAYQRRALFKTR

TrEMBL top hitse value%identityAlignment
A0A5A7U0I8 Zf-CCHC domain-containing protein/Asp_protease_2 domain-containing protein3.2e-0447.37Show/hide
Query:  MEGH-----PKRITLLAINMSDEDEVQEDSNEELDEDIDYAEPDEGDPVSCVLQRVLLTPKSEVAYQRR-ALFKTR
        +EGH     PKR T +AI   +ED ++E   +   E++   EPDEG+ +SCVLQRVL+ PKS+ ++Q+R +LFKTR
Subjt:  MEGH-----PKRITLLAINMSDEDEVQEDSNEELDEDIDYAEPDEGDPVSCVLQRVLLTPKSEVAYQRR-ALFKTR

A0A5A7U5B9 CCHC-type domain-containing protein5.5e-0433.33Show/hide
Query:  QQDVGEIKQILEIIHE---KLEALRSQQLLVARF-SGLRADIKEQIALQPIGISMKLFQ--QQPPLKNRLVIASRSNIQEETIGNMEGHPKRITLLAINM
        Q+   ++   +E  H    +   + ++Q L+ RF  GLR D+KE+  L       K F   Q   L N                     PKR  +LAI  
Subjt:  QQDVGEIKQILEIIHE---KLEALRSQQLLVARF-SGLRADIKEQIALQPIGISMKLFQ--QQPPLKNRLVIASRSNIQEETIGNMEGHPKRITLLAINM

Query:  SDEDEVQEDSNEELDEDIDYAEPDEGDPVSCVLQRVLLTPKSEVAYQRR-ALFKTR
         DED V E+  E+L ++ +  EP++G+ +SCVLQR L+TPKS+ ++Q+R +LFKT+
Subjt:  SDEDEVQEDSNEELDEDIDYAEPDEGDPVSCVLQRVLLTPKSEVAYQRR-ALFKTR

A0A5D3BTS7 Microtubule-associated protein 1B isoform X19.1e-0728.35Show/hide
Query:  MAGKKSVN-TGNSSLVNNEMEQVSILSPRSSTARLLSVEGEVKTIQQDVGEIKQILEIIHEKLEALRSQQLLVARFSGLRADIKEQIALQPIGISMKLFQ
        MAG++  N     +    E+E+++ LS R ST RLL++E  +  + + +  +   L+ + ++ E + + +L   + S  RA              M   +
Subjt:  MAGKKSVN-TGNSSLVNNEMEQVSILSPRSSTARLLSVEGEVKTIQQDVGEIKQILEIIHEKLEALRSQQLLVARFSGLRADIKEQIALQPIGISMKLFQ

Query:  QQPPLKNRLVIASRSNIQEETIGNMEGHPKRITLLAINMSDEDEVQEDSNEELDEDIDYAEPDEGDPVSCVLQRVLLTPKSEVAYQRRALFKTR
        +Q   K      S S + +E       +P+R T+      DED    +++ E +E+ +  E D+GD + C++QRVL+TPK E   QR +LFKTR
Subjt:  QQPPLKNRLVIASRSNIQEETIGNMEGHPKRITLLAINMSDEDEVQEDSNEELDEDIDYAEPDEGDPVSCVLQRVLLTPKSEVAYQRRALFKTR

A0A5D3D7P3 Uncharacterized protein5.5e-0450Show/hide
Query:  LLAINMSDEDEVQEDSNEELDEDIDYAEPDEGDPVSCVLQRVLLTPKSEVAYQRR-ALFKTR
        +LAI   DED V E+  E+L ++ +  EP++G+ +SCVLQRVL+TPKS+ ++Q+R +LFKT+
Subjt:  LLAINMSDEDEVQEDSNEELDEDIDYAEPDEGDPVSCVLQRVLLTPKSEVAYQRR-ALFKTR

A0A5D3DU61 Zf-CCHC domain-containing protein8.5e-0550.75Show/hide
Query:  PKRITLLAINMSDEDEVQEDSNEELDEDIDYAEPDEGDPVSCVLQRVLLTPKSEVAYQRR-ALFKTR
        PKR T +AI   DED ++E    + D D +  EPDEG+ +SCVLQRVL+ PK+++++Q+R +LFKTR
Subjt:  PKRITLLAINMSDEDEVQEDSNEELDEDIDYAEPDEGDPVSCVLQRVLLTPKSEVAYQRR-ALFKTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGGAAGAAGTCAGTCAATACCGGCAATTCTTCGCTCGTCAACAATGAAATGGAACAAGTATCCATTCTCTCGCCACGATCATCAACCGCACGCTTGTTGTCAGT
TGAAGGAGAAGTGAAAACCATCCAACAGGATGTCGGCGAGATTAAGCAAATCTTGGAGATTATTCATGAGAAACTTGAAGCCTTGAGAAGTCAGCAACTCCTTGTAGCAA
GATTCAGTGGATTGCGGGCTGATATTAAAGAACAAATAGCTCTGCAACCGATTGGTATCTCAATGAAGCTATTTCAACAGCAACCACCATTGAAGAACAGGTTGGTAATC
GCTTCAAGAAGCAATATTCAAGAAGAAACAATTGGGAACATGGAGGGACATCCAAAAAGAATAACACTTCTGGCCATAAACATGAGCGACGAGGATGAGGTACAAGAGGA
CAGCAATGAAGAACTGGATGAGGATATTGATTATGCCGAACCAGATGAAGGAGACCCAGTCTCTTGTGTTCTCCAAAGGGTATTGTTGACTCCTAAATCCGAAGTAGCTT
ATCAAAGACGTGCTCTTTTTAAAACTAGATCCTATTCGAAGGAGATTTCATTCGATGCTTCATCGTCATCATTTGCTCTAGGAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGGAAGAAGTCAGTCAATACCGGCAATTCTTCGCTCGTCAACAATGAAATGGAACAAGTATCCATTCTCTCGCCACGATCATCAACCGCACGCTTGTTGTCAGT
TGAAGGAGAAGTGAAAACCATCCAACAGGATGTCGGCGAGATTAAGCAAATCTTGGAGATTATTCATGAGAAACTTGAAGCCTTGAGAAGTCAGCAACTCCTTGTAGCAA
GATTCAGTGGATTGCGGGCTGATATTAAAGAACAAATAGCTCTGCAACCGATTGGTATCTCAATGAAGCTATTTCAACAGCAACCACCATTGAAGAACAGGTTGGTAATC
GCTTCAAGAAGCAATATTCAAGAAGAAACAATTGGGAACATGGAGGGACATCCAAAAAGAATAACACTTCTGGCCATAAACATGAGCGACGAGGATGAGGTACAAGAGGA
CAGCAATGAAGAACTGGATGAGGATATTGATTATGCCGAACCAGATGAAGGAGACCCAGTCTCTTGTGTTCTCCAAAGGGTATTGTTGACTCCTAAATCCGAAGTAGCTT
ATCAAAGACGTGCTCTTTTTAAAACTAGATCCTATTCGAAGGAGATTTCATTCGATGCTTCATCGTCATCATTTGCTCTAGGAGAGTAA
Protein sequenceShow/hide protein sequence
MAGKKSVNTGNSSLVNNEMEQVSILSPRSSTARLLSVEGEVKTIQQDVGEIKQILEIIHEKLEALRSQQLLVARFSGLRADIKEQIALQPIGISMKLFQQQPPLKNRLVI
ASRSNIQEETIGNMEGHPKRITLLAINMSDEDEVQEDSNEELDEDIDYAEPDEGDPVSCVLQRVLLTPKSEVAYQRRALFKTRSYSKEISFDASSSSFALGE