CuGenDBv2

Gene ID	Moc06g32550
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Succinate dehydrogenase assembly factor 4, mitochondrial
Genome location	chr6:24555864..24556571
RNA-Seq Expression	Moc06g32550
Synteny	Moc06g32550
Gene Ontology terms	GO:0008652 - cellular amino acid biosynthetic process (biological process) GO:0009064 - glutamine family amino acid metabolic process (biological process) GO:0034553 - mitochondrial respiratory chain complex II assembly (biological process) GO:0005739 - mitochondrion (cellular component) GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors (molecular function) GO:0043167 - ion binding (molecular function)
InterPro domains	IPR012875 - Succinate dehydrogenase assembly factor 4

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6605777.1 Succinate dehydrogenase assembly factor 4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-34

77.68

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Query:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRY
        MSSNL+RLFS   SL+AL AV+R TS S+SRLVSSSANQQPSR +QGVPG+EQREAGK SLP+QHE AGD++D +D+ G D+N+ATGEVGGPKGPEPTRY
Subjt:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCYDF
        GDWERNGRCYDF
Subjt:  GDWERNGRCYDF

KGN49871.1 hypothetical protein Csa_000062 [Cucumis sativus]

1.2e-30

72.32

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Query:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRY
        MSSNLSRLFSS  +LSALPAVSR+T NSLSR VSSS+NQQPSR ++GV  EEQREAGK S PN+HE AGD++   D+ GVD  + T E+GGPKGPEPTRY
Subjt:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCYDF
        GDWER GRC DF
Subjt:  GDWERNGRCYDF

XP_022957978.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita moschata]

4.8e-35

78.57

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Query:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRY
        MSSNL+RLFS   SL+AL AV+R TS S+SRLVSSSANQQPSR +QGVPGEEQREAGK SLP+QHE AGD++D +D+ G D+N+ATGEVGGPKGPEPTRY
Subjt:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCYDF
        GDWERNGRCYDF
Subjt:  GDWERNGRCYDF

XP_022995844.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita maxima]

7.3e-36

79.46

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Query:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRY
        MSSNL+RLFS   SL+AL AV+RVTS S+SRLVSSSANQQPSR +QGVPGEEQREAGK SLP+QHE AGD++D +D+ G D+N+ATGEVGGPKGPEPTRY
Subjt:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCYDF
        GDWERNGRCYDF
Subjt:  GDWERNGRCYDF

XP_023532848.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita pepo subsp. pepo]

1.1e-34

77.68

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Query:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRY
        MSSNL+RLFS   SL++L AV+R TS S+SRLVSSSANQQPSR +QGVPGEEQREAGK SLP+QHE AGD++D +D+ G D+N+ATGEVGGPKGPEPTRY
Subjt:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCYDF
        GDWERNGRCYDF
Subjt:  GDWERNGRCYDF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQ66 Succinate dehydrogenase assembly factor 4, mitochondrial

5.9e-31

72.32

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Query:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRY
        MSSNLSRLFSS  +LSALPAVSR+T NSLSR VSSS+NQQPSR ++GV  EEQREAGK S PN+HE AGD++   D+ GVD  + T E+GGPKGPEPTRY
Subjt:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCYDF
        GDWER GRC DF
Subjt:  GDWERNGRCYDF

A0A5A7TMD3 Succinate dehydrogenase assembly factor 4, mitochondrial

7.7e-31

72.32

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Query:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRY
        MSS+LSRLFSS  +LSALP V R+TSNSLSR VSSS+NQQPSRS+QGV  EEQREA K S PNQHE AGD++   D  GVD  +   E+GGPKG EPTRY
Subjt:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCYDF
        GDWERNGRCYDF
Subjt:  GDWERNGRCYDF

A0A6J1H1T7 Succinate dehydrogenase assembly factor 4, mitochondrial

2.3e-35

78.57

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Query:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRY
        MSSNL+RLFS   SL+AL AV+R TS S+SRLVSSSANQQPSR +QGVPGEEQREAGK SLP+QHE AGD++D +D+ G D+N+ATGEVGGPKGPEPTRY
Subjt:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCYDF
        GDWERNGRCYDF
Subjt:  GDWERNGRCYDF

A0A6J1K722 Succinate dehydrogenase assembly factor 4, mitochondrial

3.5e-36

79.46

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Query:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRY
        MSSNL+RLFS   SL+AL AV+RVTS S+SRLVSSSANQQPSR +QGVPGEEQREAGK SLP+QHE AGD++D +D+ G D+N+ATGEVGGPKGPEPTRY
Subjt:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCYDF
        GDWERNGRCYDF
Subjt:  GDWERNGRCYDF

W9RP47 Succinate dehydrogenase assembly factor 4, mitochondrial

6.3e-17

52.89

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Query:  MSSNLSRLFSSLQSLSALPAV---------SRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGG
        M+SNL RLFSS+ +LS    +         +R  +NS SRLVSSSA Q+P   Q+ +  +EQREA  + L N+ E    +  +D++ G  LNE TGEVGG
Subjt:  MSSNLSRLFSSLQSLSALPAV---------SRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGG

Query:  PKGPEPTRYGDWERNGRCYDF
        P+GPEPTRYGDWERNGRCYDF
Subjt:  PKGPEPTRYGDWERNGRCYDF

SwissProt top hits

e value

%identity

Alignment

Q54Y25 Succinate dehydrogenase assembly factor 4, mitochondrial

3.1e-05

33.64

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Query:  SNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRYGD
        +NL   F+ +  L+A    +++  +  S  ++++ N   + +   +   ++ E  KE+   Q     +E+ D+D+    +N  T E+GGPKGPEPTRY D
Subjt:  SNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRYGD

Query:  WERNGRCYDF
        WERNGR  DF
Subjt:  WERNGRCYDF

Q5VUM1 Succinate dehydrogenase assembly factor 4, mitochondrial

6.7e-08

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Query:  DLNEATGEVGGPKGPEPTRYGDWERNGRCYDF
        D+N  T E GGP+GPEPTRYGDWER GRC DF
Subjt:  DLNEATGEVGGPKGPEPTRYGDWERNGRCYDF

Q8BTE0 Succinate dehydrogenase assembly factor 4, mitochondrial

1.3e-06

45.83

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Query:  QQGVPGEEQREAGKESLP----NQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRYGDWERNGRCYDF
        Q+G P   ++   K  LP    +  E + +E++       D+N  T E GGPKGPEPTRYGDWER GRC DF
Subjt:  QQGVPGEEQREAGKESLP----NQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTRYGDWERNGRCYDF

Q9VLU6 Succinate dehydrogenase assembly factor 4, mitochondrial

9.7e-07

76.67

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Query:  NEATGEVGGPKGPEPTRYGDWERNGRCYDF
        N  TGE+GGP GPEPTRYGDWER GR  DF
Subjt:  NEATGEVGGPKGPEPTRYGDWERNGRCYDF

Arabidopsis top hits

e value

%identity

Alignment

AT5G67490.1 unknown protein

5.3e-08

38.94

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Query:  SSNLSRLFSSLQSLSA--LPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTR
        ++N+ RL +  +S+S+  L  VSR  S+      +    Q PS +Q      +  +  +++L  Q E   +E+ +   GG  +NE TGE+GGP+GPEPTR
Subjt:  SSNLSRLFSSLQSLSA--LPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEPTR

Query:  YGDWERNGRCYDF
        YGDWE+ GRC DF
Subjt:  YGDWERNGRCYDF

Sequences

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CDS sequence

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ATGCCTGAAGCTGAAGATTTCGGGTGTCTTTCTGGGAATTTAATGCGTGGAATTCGCTTCAACACATGCCCTTCCACTCCCATCTTCTTCTTCTTCTTCTTCTTCTTCTT
CTTCTTCTTCTTCTGCTTTACTCTTTCTCTTTTGGGTTTCTTTGCTTTTGGTTTGGCTGATTGGCAAATTGGCAATAAGGCCGCGTTTACTATCAAAAGAGTTTGGTTTT
CAGCCAAAAACGGCTCAAGCCGACCGTGTGGAACAATGACACGTGGTGGTTCCACTGTTCTACACGACGTCGCATTGCAGCTCCATAAATTCCCGATTCCCCCCACCACC
AACCGCCGGCCGTTCGCAGATCCGATCGAGCGAAGAACAATGTCGAGCAATCTCAGCCGTTTATTCTCGTCGCTGCAGAGTCTCTCAGCCCTACCGGCGGTGAGTCGCGT
CACTTCCAACTCGTTGAGCCGACTCGTCAGCTCCTCGGCGAATCAGCAGCCTTCTCGTTCGCAGCAAGGCGTCCCCGGCGAGGAACAACGTGAGGCCGGGAAAGAAAGCT
TGCCAAATCAACACGAGCCTGCGGGAGATGAGCAAGACGACGACGACGACGGAGGAGTTGATTTGAATGAAGCTACCGGCGAGGTCGGTGGACCTAAAGGCCCTGAGCCC
ACCCGCTACGGCGATTGGGAACGAAACGGCCGGTGCTACGATTTTTAA

mRNA sequence

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Protein sequence

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MPEAEDFGCLSGNLMRGIRFNTCPSTPIFFFFFFFFFFFFFCFTLSLLGFFAFGLADWQIGNKAAFTIKRVWFSAKNGSSRPCGTMTRGGSTVLHDVALQLHKFPIPPTT
NRRPFADPIERRTMSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDEQDDDDDGGVDLNEATGEVGGPKGPEP
TRYGDWERNGRCYDF

Moc06g32550 (gene) of Bitter gourd (OHB3-1) v2 genome