; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g32980 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g32980
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionBED-type domain-containing protein
Genome locationchr6:24889711..24897144
RNA-Seq ExpressionMoc06g32980
SyntenyMoc06g32980
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACX85638.1 putative transposase [Cucumis melo]2.7e-2638.92Show/hide
Query:  AYACDEQKNDTTDMKQIELNCENYPSRVLDSKQ------------------------KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQ
        +YACD ++N TT++K+    C+ Y + + D+ +                        +M+I+ + PF+ VE E F  F  ++ P F+IPSR  + +DC Q
Subjt:  AYACDEQKNDTTDMKQIELNCENYPSRVLDSKQ------------------------KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQ

Query:  LYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNI
        +Y +EKKKLK  L  + QRVCL+ +TWTS++ +NYMV+T HFI  DW L KRIL F  + +H+ D I
Subjt:  LYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNI

KAA0026183.1 putative transposase [Cucumis melo var. makuwa]2.7e-2638.92Show/hide
Query:  AYACDEQKNDTTDMKQIELNCENYPSRVLDSKQ------------------------KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQ
        +YACD ++N TT++K+    C+ Y + + D+ +                        +M+I+ + PF+ VE E F  F  ++ P F+IPSR  + +DC Q
Subjt:  AYACDEQKNDTTDMKQIELNCENYPSRVLDSKQ------------------------KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQ

Query:  LYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNI
        +Y +EKKKLK  L  + QRVCL+ +TWTS++ +NYMV+T HFI  DW L KRIL F  + +H+ D I
Subjt:  LYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNI

RVW32261.1 Zinc finger BED domain-containing protein RICESLEEPER 1 [Vitis vinifera]1.1e-2737.87Show/hide
Query:  PNITKKRESNPSSPIRKNNRRSKTFGPP---DHCNEHSDC----LIATSNY-EIAYACDEQKNDTTDMK-QIELNCENYPSRVLDSKQK-----------
        P  T     + S P +  ++R  T  P    DH  +  +C      AT NY  I YAC +++N+T++MK  +   C+ +P R  D KQK           
Subjt:  PNITKKRESNPSSPIRKNNRRSKTFGPP---DHCNEHSDC----LIATSNY-EIAYACDEQKNDTTDMK-QIELNCENYPSRVLDSKQK-----------

Query:  --------------------------MIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQLYSEEKKKLKRVLVENEQRVCLSMETWTSIKK
                                  MII+ +  FR V+ E F  F   +QP F IPSR  + +DC QLYS EKKKLK VL    Q+VCL+ +TWTS++ 
Subjt:  --------------------------MIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQLYSEEKKKLKRVLVENEQRVCLSMETWTSIKK

Query:  LNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNI
        LNYMVLT HF+  +WKL KRIL F  IP+H+ D I
Subjt:  LNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNI

TYK06161.1 putative transposase [Cucumis melo var. makuwa]2.7e-2638.92Show/hide
Query:  AYACDEQKNDTTDMKQIELNCENYPSRVLDSKQ------------------------KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQ
        +YACD ++N TT++K+    C+ Y + + D+ +                        +M+I+ + PF+ VE E F  F  ++ P F+IPSR  + +DC Q
Subjt:  AYACDEQKNDTTDMKQIELNCENYPSRVLDSKQ------------------------KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQ

Query:  LYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNI
        +Y +EKKKLK  L  + QRVCL+ +TWTS++ +NYMV+T HFI  DW L KRIL F  + +H+ D I
Subjt:  LYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNI

TYK30776.1 putative transposase [Cucumis melo var. makuwa]2.7e-2638.92Show/hide
Query:  AYACDEQKNDTTDMKQIELNCENYPSRVLDSKQ------------------------KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQ
        +YACD ++N TT++K+    C+ Y + + D+ +                        +M+I+ + PF+ VE E F  F  ++ P F+IPSR  + +DC Q
Subjt:  AYACDEQKNDTTDMKQIELNCENYPSRVLDSKQ------------------------KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQ

Query:  LYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNI
        +Y +EKKKLK  L  + QRVCL+ +TWTS++ +NYMV+T HFI  DW L KRIL F  + +H+ D I
Subjt:  LYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNI

TrEMBL top hitse value%identityAlignment
A0A438D9Y4 Zinc finger BED domain-containing protein RICESLEEPER 15.2e-2837.87Show/hide
Query:  PNITKKRESNPSSPIRKNNRRSKTFGPP---DHCNEHSDC----LIATSNY-EIAYACDEQKNDTTDMK-QIELNCENYPSRVLDSKQK-----------
        P  T     + S P +  ++R  T  P    DH  +  +C      AT NY  I YAC +++N+T++MK  +   C+ +P R  D KQK           
Subjt:  PNITKKRESNPSSPIRKNNRRSKTFGPP---DHCNEHSDC----LIATSNY-EIAYACDEQKNDTTDMK-QIELNCENYPSRVLDSKQK-----------

Query:  --------------------------MIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQLYSEEKKKLKRVLVENEQRVCLSMETWTSIKK
                                  MII+ +  FR V+ E F  F   +QP F IPSR  + +DC QLYS EKKKLK VL    Q+VCL+ +TWTS++ 
Subjt:  --------------------------MIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQLYSEEKKKLKRVLVENEQRVCLSMETWTSIKK

Query:  LNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNI
        LNYMVLT HF+  +WKL KRIL F  IP+H+ D I
Subjt:  LNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNI

A0A5A7SNJ1 Putative transposase1.3e-2638.92Show/hide
Query:  AYACDEQKNDTTDMKQIELNCENYPSRVLDSKQ------------------------KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQ
        +YACD ++N TT++K+    C+ Y + + D+ +                        +M+I+ + PF+ VE E F  F  ++ P F+IPSR  + +DC Q
Subjt:  AYACDEQKNDTTDMKQIELNCENYPSRVLDSKQ------------------------KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQ

Query:  LYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNI
        +Y +EKKKLK  L  + QRVCL+ +TWTS++ +NYMV+T HFI  DW L KRIL F  + +H+ D I
Subjt:  LYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNI

A0A5D3C2L4 Putative transposase1.3e-2638.92Show/hide
Query:  AYACDEQKNDTTDMKQIELNCENYPSRVLDSKQ------------------------KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQ
        +YACD ++N TT++K+    C+ Y + + D+ +                        +M+I+ + PF+ VE E F  F  ++ P F+IPSR  + +DC Q
Subjt:  AYACDEQKNDTTDMKQIELNCENYPSRVLDSKQ------------------------KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQ

Query:  LYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNI
        +Y +EKKKLK  L  + QRVCL+ +TWTS++ +NYMV+T HFI  DW L KRIL F  + +H+ D I
Subjt:  LYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNI

A0A5D3E4G3 Putative transposase1.3e-2638.92Show/hide
Query:  AYACDEQKNDTTDMKQIELNCENYPSRVLDSKQ------------------------KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQ
        +YACD ++N TT++K+    C+ Y + + D+ +                        +M+I+ + PF+ VE E F  F  ++ P F+IPSR  + +DC Q
Subjt:  AYACDEQKNDTTDMKQIELNCENYPSRVLDSKQ------------------------KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQ

Query:  LYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNI
        +Y +EKKKLK  L  + QRVCL+ +TWTS++ +NYMV+T HFI  DW L KRIL F  + +H+ D I
Subjt:  LYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNI

A0A5D3E590 Putative transposase1.3e-2638.92Show/hide
Query:  AYACDEQKNDTTDMKQIELNCENYPSRVLDSKQ------------------------KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQ
        +YACD ++N TT++K+    C+ Y + + D+ +                        +M+I+ + PF+ VE E F  F  ++ P F+IPSR  + +DC Q
Subjt:  AYACDEQKNDTTDMKQIELNCENYPSRVLDSKQ------------------------KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQ

Query:  LYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNI
        +Y +EKKKLK  L  + QRVCL+ +TWTS++ +NYMV+T HFI  DW L KRIL F  + +H+ D I
Subjt:  LYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNI

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 12.1e-1031.9Show/hide
Query:  KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQLYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFS
        KMII+H YP  IV+  AF TF  S+QP F +   + +  +   +Y +EK+ L +       R+ L++  WT+ + L Y+ L   FI  +WK+ +R+L F 
Subjt:  KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQLYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFS

Query:  LIPDHEEDNIEGDTTS
        ++     +N   +  S
Subjt:  LIPDHEEDNIEGDTTS

P03010 Putative AC9 transposase6.4e-1546.39Show/hide
Query:  IIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQLYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKF
        IIMH+YPF IVE E F+ F  S++P F I SR    +  + LY EEK+KL   L + + R   +M+ WTS +  +YM +T+H+I  DW LQKRI+ F
Subjt:  IIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQLYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKF

P08770 Putative AC transposase6.4e-1546.39Show/hide
Query:  IIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQLYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKF
        IIMH+YPF IVE E F+ F  S++P F I SR    +  + LY EEK+KL   L + + R   +M+ WTS +  +YM +T+H+I  DW LQKRI+ F
Subjt:  IIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQLYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKF

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 21.2e-1031.9Show/hide
Query:  KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQLYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFS
        KMII+H YP  IV+  AF TF  S+QP F +   + +  +   +Y +EK+ L +       R+ L++  WT+ + L Y+ L   FI  +WK+ +R+L F 
Subjt:  KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQLYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFS

Query:  LIPDHEEDNIEGDTTS
        ++     +N   +  S
Subjt:  LIPDHEEDNIEGDTTS

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER7.0e-1441.24Show/hide
Query:  KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQLYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRIL
        KMIIMH YP  +V+   F++F  SIQP F   S   +  DC+  Y  EK+ + + L     R CL+++ WTS   L Y+ +T H+I  DWK+QK++L
Subjt:  KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQLYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRIL

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain5.0e-1541.24Show/hide
Query:  KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQLYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRIL
        KMIIMH YP  +V+   F++F  SIQP F   S   +  DC+  Y  EK+ + + L     R CL+++ WTS   L Y+ +T H+I  DWK+QK++L
Subjt:  KMIIMHKYPFRIVECEAFLTFSLSIQPDFIIPSRKRIVRDCLQLYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCTTGCAATGCTGGGAAGGAGGACCCTAACATCACAAAGAAACGTGAGTCAAATCCATCAAGTCCGATAAGAAAGAACAACAGGCGAAGTAAGACTTTTGGGCC
CCCGGATCATTGTAATGAGCATTCTGATTGTCTAATTGCAACATCTAATTATGAAATTGCGTATGCATGCGATGAACAAAAGAACGACACCACCGATATGAAGCAAATAG
AACTCAACTGTGAAAACTATCCAAGTAGAGTACTTGACTCGAAACAAAAGATGATAATTATGCACAAATATCCTTTTCGAATAGTGGAGTGCGAAGCCTTTCTAACATTT
TCCCTTTCAATACAACCTGATTTTATCATACCTTCACGTAAACGCATTGTTAGAGATTGTTTACAGCTTTACTCAGAAGAGAAGAAAAAATTGAAAAGAGTTTTAGTAGA
AAATGAGCAAAGAGTTTGTTTATCGATGGAAACTTGGACATCGATCAAGAAGTTGAACTATATGGTTCTTACTATGCACTTCATTACTCATGATTGGAAATTGCAAAAAA
GGATTCTAAAGTTTTCTTTGATCCCTGATCATGAAGAAGATAACATTGAAGGAGATACCACTAGTCATGAAGAAGATACTACTGGTCATGAAGAAGATACCATTGATGAT
GAAGAAGATACCATTGAAGGAGATACTGGTGGAAAACTGATTGAAGCATATGATGCGCTTGGGCTTGAAGAGGAGGATGAGGATGAAGAGGATGAAGAGGAGTTTGAGGA
TGGTCCTACTTCTAAGTCCAAGATCACACTGGGAGATACTTCTCACAATCTGACTTGGTATGCTGAAGTTCTGTCTTCTCAATCTTCTTCTTCCCTCTTCCAACTTCGAA
GCCGGCCGCCGCATCTCTCTCTCTCGCCGCTCGGATCTCTGCACATCCGTCTTTCCTCGCCGGCGCCGCCGCGTGAATCTATCTCTCTCGCGCTTTCGTCAGCTCGTAAA
TTTAGCTTGCCAAGCATGGAGCCAAATCCAGCAACTCCAATAAGAATCAAGAAGCGAAGTATGACTGAAGTTGATGGTGGGGATTCTGATAATGAATCTAATGAACAAAA
GAACAACACCACAAATATGGAGCAATTCAAGTGTGAAAGAGGAGAAAATAAGAAATCAAATGGGGTTCTATTACATGGTGAGTTTGCGCACATTGTTAATCTTATGGCAT
GTGATGCTTTGAAGGAACTTCATGATTCAACTATGAAGATTCGTAATGCTATTGACCCACAAAAGAATGTCACCACTGAAGAGCTTGAGCTTGAAGAAGAGATGGAGGAT
GAAGGGATCCAGTCAACAGGCATAATCTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCCTTGCAATGCTGGGAAGGAGGACCCTAACATCACAAAGAAACGTGAGTCAAATCCATCAAGTCCGATAAGAAAGAACAACAGGCGAAGTAAGACTTTTGGGCC
CCCGGATCATTGTAATGAGCATTCTGATTGTCTAATTGCAACATCTAATTATGAAATTGCGTATGCATGCGATGAACAAAAGAACGACACCACCGATATGAAGCAAATAG
AACTCAACTGTGAAAACTATCCAAGTAGAGTACTTGACTCGAAACAAAAGATGATAATTATGCACAAATATCCTTTTCGAATAGTGGAGTGCGAAGCCTTTCTAACATTT
TCCCTTTCAATACAACCTGATTTTATCATACCTTCACGTAAACGCATTGTTAGAGATTGTTTACAGCTTTACTCAGAAGAGAAGAAAAAATTGAAAAGAGTTTTAGTAGA
AAATGAGCAAAGAGTTTGTTTATCGATGGAAACTTGGACATCGATCAAGAAGTTGAACTATATGGTTCTTACTATGCACTTCATTACTCATGATTGGAAATTGCAAAAAA
GGATTCTAAAGTTTTCTTTGATCCCTGATCATGAAGAAGATAACATTGAAGGAGATACCACTAGTCATGAAGAAGATACTACTGGTCATGAAGAAGATACCATTGATGAT
GAAGAAGATACCATTGAAGGAGATACTGGTGGAAAACTGATTGAAGCATATGATGCGCTTGGGCTTGAAGAGGAGGATGAGGATGAAGAGGATGAAGAGGAGTTTGAGGA
TGGTCCTACTTCTAAGTCCAAGATCACACTGGGAGATACTTCTCACAATCTGACTTGGTATGCTGAAGTTCTGTCTTCTCAATCTTCTTCTTCCCTCTTCCAACTTCGAA
GCCGGCCGCCGCATCTCTCTCTCTCGCCGCTCGGATCTCTGCACATCCGTCTTTCCTCGCCGGCGCCGCCGCGTGAATCTATCTCTCTCGCGCTTTCGTCAGCTCGTAAA
TTTAGCTTGCCAAGCATGGAGCCAAATCCAGCAACTCCAATAAGAATCAAGAAGCGAAGTATGACTGAAGTTGATGGTGGGGATTCTGATAATGAATCTAATGAACAAAA
GAACAACACCACAAATATGGAGCAATTCAAGTGTGAAAGAGGAGAAAATAAGAAATCAAATGGGGTTCTATTACATGGTGAGTTTGCGCACATTGTTAATCTTATGGCAT
GTGATGCTTTGAAGGAACTTCATGATTCAACTATGAAGATTCGTAATGCTATTGACCCACAAAAGAATGTCACCACTGAAGAGCTTGAGCTTGAAGAAGAGATGGAGGAT
GAAGGGATCCAGTCAACAGGCATAATCTTATAG
Protein sequenceShow/hide protein sequence
MDPCNAGKEDPNITKKRESNPSSPIRKNNRRSKTFGPPDHCNEHSDCLIATSNYEIAYACDEQKNDTTDMKQIELNCENYPSRVLDSKQKMIIMHKYPFRIVECEAFLTF
SLSIQPDFIIPSRKRIVRDCLQLYSEEKKKLKRVLVENEQRVCLSMETWTSIKKLNYMVLTMHFITHDWKLQKRILKFSLIPDHEEDNIEGDTTSHEEDTTGHEEDTIDD
EEDTIEGDTGGKLIEAYDALGLEEEDEDEEDEEEFEDGPTSKSKITLGDTSHNLTWYAEVLSSQSSSSLFQLRSRPPHLSLSPLGSLHIRLSSPAPPRESISLALSSARK
FSLPSMEPNPATPIRIKKRSMTEVDGGDSDNESNEQKNNTTNMEQFKCERGENKKSNGVLLHGEFAHIVNLMACDALKELHDSTMKIRNAIDPQKNVTTEELELEEEMED
EGIQSTGIIL