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Moc06g33200 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g33200
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRING-H2 finger protein ATL63
Genome locationchr6:25155988..25156293
RNA-Seq ExpressionMoc06g33200
SyntenyMoc06g33200
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150327.1 uncharacterized protein LOC111018524 [Momordica charantia]1.5e-3886.32Show/hide
Query:  GQQNHRDFNHIKMADDRDVAMREYAATAFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDALR
        GQQ + +FNHI MAD+RDVAMREYAATAFQNLDSVILNPIPEAAN ELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQ A AFR  +I+DDALR
Subjt:  GQQNHRDFNHIKMADDRDVAMREYAATAFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDALR

XP_022155016.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022160 [Momordica charantia]9.5e-2585.29Show/hide
Query:  AFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDALR
        AFQNLDS ILNPIP+AANFELKPLMFQMLQTLGQFGGREH+DPHDHLKTF Q A AFR  +I+DDALR
Subjt:  AFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDALR

XP_022158408.1 uncharacterized protein LOC111024897, partial [Momordica charantia]4.0e-3172.34Show/hide
Query:  RGQQNHRDFNHIKMADDRDVAMREYAATAFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDA
        R    + +FN+I+MAD+RDVAMREYAATAFQN DS I+NPIP   NFELKP+MFQMLQT+G FGG+EHEDPHDHLK+F+Q ANAFRL  I+DDA
Subjt:  RGQQNHRDFNHIKMADDRDVAMREYAATAFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDA

XP_022158836.1 uncharacterized protein LOC111025302 [Momordica charantia]2.0e-2263.22Show/hide
Query:  NHIKMADDRDVAMREYAATAFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDALR
        N I +AD+RDVAMR Y   AF NL+S I NP+P+AA FELKP+MFQ+LQT+GQFGG  +EDP+ HLK+F++ ANAF+L   S+DALR
Subjt:  NHIKMADDRDVAMREYAATAFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDALR

XP_022159074.1 uncharacterized protein LOC111025516 [Momordica charantia]1.8e-2363.22Show/hide
Query:  NHIKMADDRDVAMREYAATAFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDALR
        N I MAD RD AMR+YAAT  ++L+S ++NP+P  A FE KP+M QML T+GQFGG EHEDP  HLK+F++ AN FRL  ISDDALR
Subjt:  NHIKMADDRDVAMREYAATAFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDALR

TrEMBL top hitse value%identityAlignment
A0A6J1DAG1 uncharacterized protein LOC1110185247.3e-3986.32Show/hide
Query:  GQQNHRDFNHIKMADDRDVAMREYAATAFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDALR
        GQQ + +FNHI MAD+RDVAMREYAATAFQNLDSVILNPIPEAAN ELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQ A AFR  +I+DDALR
Subjt:  GQQNHRDFNHIKMADDRDVAMREYAATAFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDALR

A0A6J1DQF5 LOW QUALITY PROTEIN: uncharacterized protein LOC1110221604.6e-2585.29Show/hide
Query:  AFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDALR
        AFQNLDS ILNPIP+AANFELKPLMFQMLQTLGQFGGREH+DPHDHLKTF Q A AFR  +I+DDALR
Subjt:  AFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDALR

A0A6J1DW02 uncharacterized protein LOC1110248971.9e-3172.34Show/hide
Query:  RGQQNHRDFNHIKMADDRDVAMREYAATAFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDA
        R    + +FN+I+MAD+RDVAMREYAATAFQN DS I+NPIP   NFELKP+MFQMLQT+G FGG+EHEDPHDHLK+F+Q ANAFRL  I+DDA
Subjt:  RGQQNHRDFNHIKMADDRDVAMREYAATAFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDA

A0A6J1E1A9 uncharacterized protein LOC1110255168.7e-2463.22Show/hide
Query:  NHIKMADDRDVAMREYAATAFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDALR
        N I MAD RD AMR+YAAT  ++L+S ++NP+P  A FE KP+M QML T+GQFGG EHEDP  HLK+F++ AN FRL  ISDDALR
Subjt:  NHIKMADDRDVAMREYAATAFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDALR

A0A6J1E251 uncharacterized protein LOC1110253029.6e-2363.22Show/hide
Query:  NHIKMADDRDVAMREYAATAFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDALR
        N I +AD+RDVAMR Y   AF NL+S I NP+P+AA FELKP+MFQ+LQT+GQFGG  +EDP+ HLK+F++ ANAF+L   S+DALR
Subjt:  NHIKMADDRDVAMREYAATAFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDALR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGGCAAGGAAGAGGACAACAAAACCATAGGGATTTTAACCATATCAAAATGGCGGATGATAGAGACGTAGCCATGCGAGAGTATGCAGCTACAGCATTCCAGAA
TTTGGATTCGGTCATTTTGAATCCTATTCCAGAAGCTGCCAATTTCGAGCTCAAGCCGCTCATGTTTCAAATGCTTCAGACATTAGGACAATTTGGAGGGCGCGAACATG
AAGATCCTCATGACCATCTCAAGACATTTCTTCAAACCGCAAATGCTTTTAGATTGCTTGATATCTCTGATGATGCTTTGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGGCAAGGAAGAGGACAACAAAACCATAGGGATTTTAACCATATCAAAATGGCGGATGATAGAGACGTAGCCATGCGAGAGTATGCAGCTACAGCATTCCAGAA
TTTGGATTCGGTCATTTTGAATCCTATTCCAGAAGCTGCCAATTTCGAGCTCAAGCCGCTCATGTTTCAAATGCTTCAGACATTAGGACAATTTGGAGGGCGCGAACATG
AAGATCCTCATGACCATCTCAAGACATTTCTTCAAACCGCAAATGCTTTTAGATTGCTTGATATCTCTGATGATGCTTTGAGATGA
Protein sequenceShow/hide protein sequence
MARQGRGQQNHRDFNHIKMADDRDVAMREYAATAFQNLDSVILNPIPEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQTANAFRLLDISDDALR