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Moc06g33390 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g33390
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionarabinogalactan peptide 22-like
Genome locationchr6:25335336..25335672
RNA-Seq ExpressionMoc06g33390
SyntenyMoc06g33390
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579545.1 Arabinogalactan protein 16, partial [Cucurbita argyrosperma subsp. sororia]3.4e-1263.29Show/hide
Query:  VVAVRNYLPLGILVAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSISF
        +  V N +P G+   + V FVL   LP  A    +S++PAQP A SDGTSIDQGIAY LMLLALVLTYIIHSADLSISF
Subjt:  VVAVRNYLPLGILVAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSISF

KAG7017004.1 Arabinogalactan peptide 16 [Cucurbita argyrosperma subsp. argyrosperma]9.8e-1263.29Show/hide
Query:  VVAVRNYLPLGILVAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSISF
        +  V N +P G+     V FVL   LP  A    +S++PAQP A SDGTSIDQGIAY LMLLALVLTYIIHSADLSISF
Subjt:  VVAVRNYLPLGILVAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSISF

XP_004143956.1 arabinogalactan protein 41 [Cucumis sativus]7.0e-1067.21Show/hide
Query:  VAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSIS
        + FV+   L   + A  +S+SPAQP AT DGTSIDQGIAY LMLLALVLTYIIHSADL +S
Subjt:  VAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSIS

XP_022146078.1 arabinogalactan peptide 22-like [Momordica charantia]5.0e-32100Show/hide
Query:  MVVAVRNYLPLGILVAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSISFST
        MVVAVRNYLPLGILVAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSISFST
Subjt:  MVVAVRNYLPLGILVAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSISFST

XP_023532560.1 arabinogalactan peptide 20-like [Cucurbita pepo subsp. pepo]4.1e-1062.03Show/hide
Query:  MVVAVRNYLPLGILVAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSIS
        M V   N +P G+L  VAVAFVL    P  A A   S+SPAQP   SDGTS+DQGIAY LMLLAL+LTYIIH A+L IS
Subjt:  MVVAVRNYLPLGILVAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSIS

TrEMBL top hitse value%identityAlignment
A0A0A0KK44 Uncharacterized protein3.4e-1067.21Show/hide
Query:  VAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSIS
        + FV+   L   + A  +S+SPAQP AT DGTSIDQGIAY LMLLALVLTYIIHSADL +S
Subjt:  VAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSIS

A0A1S3ATI9 arabinogalactan peptide 22-like4.4e-1068.85Show/hide
Query:  VAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSIS
        + FV+   L   + A  +S+SPAQP ATSDGTSIDQGIAYALMLLALVLTYIIHSAD  +S
Subjt:  VAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSIS

A0A5D3C2F1 Arabinogalactan peptide 22-like4.4e-1068.85Show/hide
Query:  VAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSIS
        + FV+   L   + A  +S+SPAQP ATSDGTSIDQGIAYALMLLALVLTYIIHSAD  +S
Subjt:  VAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSIS

A0A6J1CXM0 arabinogalactan peptide 22-like2.4e-32100Show/hide
Query:  MVVAVRNYLPLGILVAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSISFST
        MVVAVRNYLPLGILVAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSISFST
Subjt:  MVVAVRNYLPLGILVAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSISFST

A0A6J1K4A3 arabinogalactan peptide 22-like7.6e-1064.79Show/hide
Query:  LPLGILVAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSIS
        +P G+L  VAVAFVL    P  A A   S+SPAQP   SDGTS+DQGIAY LMLLAL+LTYIIH A+L IS
Subjt:  LPLGILVAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSIS

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 165.2e-0858.93Show/hide
Query:  FLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSISFS
        F  + + A  +S++PA P  TSDGTSIDQGIAY LM++ALVLTY+IH  D S S+S
Subjt:  FLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSISFS

Q8L9T8 Arabinogalactan protein 414.4e-0760.34Show/hide
Query:  VAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIH
        V+  V+ +    LP+ AHAQ  S +PA P  TSDGT+IDQGIAY LML+ALVLTY+IH
Subjt:  VAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIH

Q9FK16 Arabinogalactan protein 222.9e-0657.14Show/hide
Query:  PLGILVAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIH
        PL IL    +  V+   LP+   AQ  S SPA P  TSDGTSIDQGIAY LM++AL LTY IH
Subjt:  PLGILVAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIH

Q9M373 Arabinogalactan protein 204.4e-0754.41Show/hide
Query:  VAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSISFST
        VAV   F    F  +   A  +S++PA P  TSDGTSIDQGIAY LM++ALVLTY+IH  D S S  T
Subjt:  VAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSISFST

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 163.7e-0958.93Show/hide
Query:  FLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSISFS
        F  + + A  +S++PA P  TSDGTSIDQGIAY LM++ALVLTY+IH  D S S+S
Subjt:  FLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSISFS

AT3G61640.1 arabinogalactan protein 203.1e-0854.41Show/hide
Query:  VAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSISFST
        VAV   F    F  +   A  +S++PA P  TSDGTSIDQGIAY LM++ALVLTY+IH  D S S  T
Subjt:  VAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSISFST

AT5G24105.1 arabinogalactan protein 413.1e-0860.34Show/hide
Query:  VAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIH
        V+  V+ +    LP+ AHAQ  S +PA P  TSDGT+IDQGIAY LML+ALVLTY+IH
Subjt:  VAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIH

AT5G53250.1 arabinogalactan protein 222.0e-0757.14Show/hide
Query:  PLGILVAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIH
        PL IL    +  V+   LP+   AQ  S SPA P  TSDGTSIDQGIAY LM++AL LTY IH
Subjt:  PLGILVAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGTGGCGGTTCGAAATTACCTCCCATTGGGAATTTTGGTTGCTGTTGCTGTAGCCTTTGTTTTGGGTGCCTTTTTGCCGGTTCAAGCTCATGCTCAACCCGAGTC
AATGTCTCCAGCCCAACCCCTTGCTACTAGCGATGGGACGAGCATAGATCAAGGGATTGCGTATGCATTAATGTTGTTGGCCTTGGTTCTCACTTACATTATCCATTCAG
CTGACCTCTCTATCAGTTTTTCAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGTGGCGGTTCGAAATTACCTCCCATTGGGAATTTTGGTTGCTGTTGCTGTAGCCTTTGTTTTGGGTGCCTTTTTGCCGGTTCAAGCTCATGCTCAACCCGAGTC
AATGTCTCCAGCCCAACCCCTTGCTACTAGCGATGGGACGAGCATAGATCAAGGGATTGCGTATGCATTAATGTTGTTGGCCTTGGTTCTCACTTACATTATCCATTCAG
CTGACCTCTCTATCAGTTTTTCAACTTGA
Protein sequenceShow/hide protein sequence
MVVAVRNYLPLGILVAVAVAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSISFST