CuGenDBv2

Gene ID	Moc06g33730
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	damaged DNA binding;exodeoxyribonuclease IIIs
Genome location	chr6:25571787..25575251
RNA-Seq Expression	Moc06g33730
Synteny	Moc06g33730
Gene Ontology terms	GO:0000077 - DNA damage checkpoint (biological process) GO:0006281 - DNA repair (biological process) GO:0030896 - checkpoint clamp complex (cellular component)
InterPro domains	IPR003021 - Rad1/Rec1/Rad17

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6605579.1 Cell cycle checkpoint protein RAD1, partial [Cucurbita argyrosperma subsp. sororia]

6.2e-157

93.02

Show/hide

Query:  MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR
        MSSSAVD+++PDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEY+AQARPRFGVSLG FVDSLNTFSVPGR
Subjt:  MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR

Query:  SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD
         S  EIKYPGPDMQLL+KSVDS DACIYAEIRTRIPETISWDY FEPAG SPLSFTVKSAALKEAIDDLEWPGSS+QI LEP+PPSVTFKGEGHGDLQVD
Subjt:  SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTTN
        FMYYANTDLLISFHCDR VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS  HIDSAGYQQPSRIAFIEFFVKPEEDTT+
Subjt:  FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTTN

Query:  D
        D
Subjt:  D

XP_022146070.1 uncharacterized protein LOC111015362 isoform X1 [Momordica charantia]

7.1e-169

100

Show/hide

Query:  MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR
        MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR
Subjt:  MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR

Query:  SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD
        SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD
Subjt:  SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEEDTTND
        FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEEDTTND
Subjt:  FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEEDTTND

XP_022957691.1 uncharacterized protein LOC111459157 isoform X1 [Cucurbita moschata]

5.6e-158

93.69

Show/hide

Query:  MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR
        MSSSAVD+++PDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLG FVDSLNTFSVPGR
Subjt:  MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR

Query:  SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD
         S  EIKYPGPDMQLL+KSVDS DACIYAEIRTRIPETISWDY FEPAGSSPLSFTVKSAALKEAIDDLEWPGSS+QI LEP+PPSVTFKGEGHGDLQVD
Subjt:  SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTTN
        FMYYANTDLLISFHCDR VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS  HIDSAGYQQPSRIAFIEFFVKPEEDTT+
Subjt:  FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTTN

Query:  D
        D
Subjt:  D

XP_022996322.1 uncharacterized protein LOC111491589 isoform X1 [Cucurbita maxima]

9.6e-158

94.02

Show/hide

Query:  MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR
        MSSSAVD+E PDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLG FVDSLNTFSVPGR
Subjt:  MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR

Query:  SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD
         S  EIKYPGPDMQLL+KSVDSLDACIYAEIRTRIPETISWDY FEPAGSSPLSFTVKSAALKEAIDDLEWPGSS+QI LEP+PPSVTFKGEGHGDLQVD
Subjt:  SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTTN
        FMYYANTDLLISFHCDR VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS  HIDSAGYQQ SRIAFIEFFVKPEEDTT+
Subjt:  FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTTN

Query:  D
        D
Subjt:  D

XP_023534468.1 uncharacterized protein LOC111796019 isoform X1 [Cucurbita pepo subsp. pepo]

4.3e-158

93.69

Show/hide

Query:  MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR
        MSSSAVD+E PDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHG+VLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLG FVDSLNTFSVPGR
Subjt:  MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR

Query:  SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD
         S  EIKYPGPDMQLL+KSVDS DACIYAEIRTRIPETISWDY FEPAGSSPLSFTVKSAALKEAIDDLEWPGSS+QI LEP+PPSVTFKGEGHGDLQVD
Subjt:  SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTTN
        FMYYANTDLLISFHCDR VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS  HIDSAGYQQPSRIAFIEFFVKPEEDTT+
Subjt:  FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTTN

Query:  D
        D
Subjt:  D

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B4R8 uncharacterized protein LOC103486009

5.2e-157

91.69

Show/hide

Query:  MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR
        MSSSAVD+E PDLVCH DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLG FVDSLNTFSVPGR
Subjt:  MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR

Query:  SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD
         ST E+KYPGPDMQLL+K+VDSLDACIYAEIRTRIP+TISWDY FEPAGSSPLSFTVKSAALKEAIDDLEWPGSS+ I L+P+PPSVTFK EGHGDLQVD
Subjt:  SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTTN
        FMYYANTDLLISFHCDR+VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGG+LKVQHLVSVA+PSTS  HIDSAGYQQPSRIAFIEFFVKPEED++N
Subjt:  FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTTN

Query:  D
        D
Subjt:  D

A0A5D3DUR6 Syntaxin-22-like protein

5.2e-157

91.69

Show/hide

Query:  MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR
        MSSSAVD+E PDLVCH DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLG FVDSLNTFSVPGR
Subjt:  MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR

Query:  SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD
         ST E+KYPGPDMQLL+K+VDSLDACIYAEIRTRIP+TISWDY FEPAGSSPLSFTVKSAALKEAIDDLEWPGSS+ I L+P+PPSVTFK EGHGDLQVD
Subjt:  SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTTN
        FMYYANTDLLISFHCDR+VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGG+LKVQHLVSVA+PSTS  HIDSAGYQQPSRIAFIEFFVKPEED++N
Subjt:  FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTTN

Query:  D
        D
Subjt:  D

A0A6J1CW92 uncharacterized protein LOC111015362 isoform X1

3.4e-169

100

Show/hide

Query:  MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR
        MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR
Subjt:  MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR

Query:  SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD
        SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD
Subjt:  SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEEDTTND
        FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEEDTTND
Subjt:  FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEEDTTND

A0A6J1GZY3 uncharacterized protein LOC111459157 isoform X1

2.7e-158

93.69

Show/hide

Query:  MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR
        MSSSAVD+++PDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLG FVDSLNTFSVPGR
Subjt:  MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR

Query:  SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD
         S  EIKYPGPDMQLL+KSVDS DACIYAEIRTRIPETISWDY FEPAGSSPLSFTVKSAALKEAIDDLEWPGSS+QI LEP+PPSVTFKGEGHGDLQVD
Subjt:  SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTTN
        FMYYANTDLLISFHCDR VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS  HIDSAGYQQPSRIAFIEFFVKPEEDTT+
Subjt:  FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTTN

Query:  D
        D
Subjt:  D

A0A6J1K1L0 uncharacterized protein LOC111491589 isoform X1

4.7e-158

94.02

Show/hide

Query:  MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR
        MSSSAVD+E PDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLG FVDSLNTFSVPGR
Subjt:  MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGR

Query:  SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD
         S  EIKYPGPDMQLL+KSVDSLDACIYAEIRTRIPETISWDY FEPAGSSPLSFTVKSAALKEAIDDLEWPGSS+QI LEP+PPSVTFKGEGHGDLQVD
Subjt:  SSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTTN
        FMYYANTDLLISFHCDR VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS  HIDSAGYQQ SRIAFIEFFVKPEEDTT+
Subjt:  FMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTTN

Query:  D
        D
Subjt:  D

SwissProt top hits

e value

%identity

Alignment

Q9QWZ1 Cell cycle checkpoint protein RAD1

2.9e-16

25.17

Show/hide

Query:  LVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFS---VPGRSSTTEIKYP
        LV  LDNV+ L     A+ ++ H  A    +++GI + VE + C+QA  ++Q ++F  +    ++   F ++L   +D L+ F     PG  +   + Y 
Subjt:  LVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFS---VPGRSSTTEIKYP

Query:  GPDMQLLIKSVDSLDACIYAEIRTRIP-ETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSV---TFKGEGHGDLQVDFMYYA
        G    L++  ++        +I T+ P ET+ +D+    + +      ++S  L+EA  +L+  G  +QI + P  P     TF   G+  L     Y  
Subjt:  GPDMQLLIKSVDSLDACIYAEIRTRIP-ETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSV---TFKGEGHGDLQVDFMYYA

Query:  NTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEED
        ++DL+ +FHCD+    RYK   L+ +T  +  S     + S  T  R G L +Q+++                +  +I F+E++  P+E+
Subjt:  NTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEED

Arabidopsis top hits

e value

%identity

Alignment

AT4G17760.1 damaged DNA binding;exodeoxyribonuclease IIIs

2.6e-137

77.13

Show/hide

Query:  SSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGRS
        SS A++ +TPDL+C LDNVQG+VDA T VRWKRHQDA++ELSEHGIVLIVEESGCLQAKVYLQRELF +YEY AQ RPRFG+SLG  VD LNTFS PG S
Subjt:  SSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGRS

Query:  STTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVDF
        +T EIKYPGPDM+LL+KSVD+L++CIY+EIRTRIPET++WDY FE AG +PL+FTVKSAALKEAIDDLEWPGSS+QI L+  PP V F+GEGHGDLQ+DF
Subjt:  STTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVDF

Query:  MYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEE
        MYYANTDLL++FHCD  VSY YKYKFL+ATT+NIP +V+RENRGSKLTIGRGGMLKVQHLVSV++     ++SAGYQ PSRIA+IEFFVKPEE
Subjt:  MYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEE

AT4G17760.2 damaged DNA binding;exodeoxyribonuclease IIIs

6.5e-112

77.27

Show/hide

Query:  ESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGRSSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSP
        ESGCLQAKVYLQRELF +YEY AQ RPRFG+SLG  VD LNTFS PG S+T EIKYPGPDM+LL+KSVD+L++CIY+EIRTRIPET++WDY FE AG +P
Subjt:  ESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGRSSTTEIKYPGPDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSP

Query:  LSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGR
        L+FTVKSAALKEAIDDLEWPGSS+QI L+  PP V F+GEGHGDLQ+DFMYYANTDLL++FHCD  VSY YKYKFL+ATT+NIP +V+RENRGSKLTIGR
Subjt:  LSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRRVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGR

Query:  GGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEE
        GGMLKVQHLVSV++     ++SAGYQ PSRIA+IEFFVKPEE
Subjt:  GGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGCTCGTCGGCGGTAGATTCAGAGACGCCCGATCTGGTTTGCCACCTTGACAACGTCCAAGGCCTGGTGGATGCCTTCACTGCTGTTAGATGGAAACGCCATCAGGA
CGCCGTAATCGAACTATCAGAGCATGGCATCGTTTTGATCGTTGAAGAATCCGGCTGTCTTCAAGCCAAAGTGTATCTGCAGCGTGAGCTTTTCATTCGTTATGAATACA
GTGCACAAGCTCGGCCAAGATTTGGAGTGAGCTTAGGCACTTTTGTTGATAGTTTGAATACGTTTTCTGTTCCTGGACGTTCAAGCACCACTGAAATCAAATACCCGGGA
CCTGACATGCAACTTCTAATCAAGTCAGTCGATTCATTAGATGCGTGCATTTATGCGGAGATCAGAACCAGAATCCCAGAGACAATCTCGTGGGATTACATTTTTGAACC
TGCAGGAAGCAGTCCACTCAGTTTCACTGTCAAGTCTGCAGCTCTGAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGCATCCAGATAGTTCTCGAACCGGCTC
CCCCTTCTGTCACCTTCAAAGGCGAAGGCCATGGAGACTTGCAGGTAGATTTCATGTACTATGCAAACACTGATCTTCTGATCTCGTTCCATTGCGATCGTCGGGTATCA
TACAGGTACAAGTACAAATTTCTACGAGCGACGACTTCCAACATACCGAGCAGCGTGATTAGAGAAAACAGGGGAAGCAAGTTGACTATTGGGAGAGGAGGAATGCTAAA
AGTTCAGCACTTGGTTTCTGTGGCAAGACCATCCACTTCGCATATAGATTCTGCTGGTTATCAGCAACCCAGCAGAATTGCTTTCATTGAGTTTTTTGTGAAACCAGAGG
AGGACACCACAAATGATTAA

mRNA sequence

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Protein sequence

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MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGRSSTTEIKYPG
PDMQLLIKSVDSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVLEPAPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRRVS
YRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEEDTTND

Moc06g33730 (gene) of Bitter gourd (OHB3-1) v2 genome