; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g34370 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g34370
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionzinc finger protein 3-like
Genome locationchr6:26029849..26030322
RNA-Seq ExpressionMoc06g34370
SyntenyMoc06g34370
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571507.1 Zinc finger protein 11, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3052.26Show/hide
Query:  KEKWDCVQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNF-----YSPHPTFFSSTSSS----GPQTHQ
        + +W  V +      +QF WPAKNY+CNFC+REFKSAQALGGHMNVHRRDRAR+RLLPSW+ +NS PNPN       + + +  S+T       G  +  
Subjt:  KEKWDCVQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNF-----YSPHPTFFSSTSSS----GPQTHQ

Query:  DHRLCFTNQKHHDDDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL
        +++  F++Q  HDD   + V+KKK KK+LVNLELKMG    + SNED LDLEL L
Subjt:  DHRLCFTNQKHHDDDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL

XP_022145912.1 zinc finger protein 3-like [Momordica charantia]2.5e-88100Show/hide
Query:  MDGALLSSGKVKEKWDCVQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNFYSPHPTFFSSTSSSGPQT
        MDGALLSSGKVKEKWDCVQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNFYSPHPTFFSSTSSSGPQT
Subjt:  MDGALLSSGKVKEKWDCVQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNFYSPHPTFFSSTSSSGPQT

Query:  HQDHRLCFTNQKHHDDDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL
        HQDHRLCFTNQKHHDDDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL
Subjt:  HQDHRLCFTNQKHHDDDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL

XP_022963791.1 zinc finger protein 11-like [Cucurbita moschata]1.8e-3052.26Show/hide
Query:  KEKWDCVQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNF-----YSPHPTFFSSTSSS----GPQTHQ
        + +W  V +      +QF WPAKNY+CNFC+REFKSAQALGGHMNVHRRDRAR+RLLPSW+ +NS PNPN       + + +  S+T       G  +  
Subjt:  KEKWDCVQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNF-----YSPHPTFFSSTSSS----GPQTHQ

Query:  DHRLCFTNQKHHDDDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL
        +++  F++Q  HDD   + V+KKK KK+LVNLELKMG    + SNED LDLEL L
Subjt:  DHRLCFTNQKHHDDDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL

XP_023511420.1 zinc finger protein 11-like [Cucurbita pepo subsp. pepo]4.7e-3152.53Show/hide
Query:  KEKWDCVQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNFYSPHPTFFSSTSSS------------GPQ
        + +W  V +      +QF WPAKNY+CNFC+REFKSAQALGGHMNVHRRDRAR+RLLPSW+ +NS PNPN      TF  +T++S            G  
Subjt:  KEKWDCVQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNFYSPHPTFFSSTSSS------------GPQ

Query:  THQDHRLCFTNQKHHDDDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL
        +  +++  F++Q  HDD   + V+KKK KK+LVNLELKMG    + SNED LDLEL L
Subjt:  THQDHRLCFTNQKHHDDDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL

XP_038888773.1 LOW QUALITY PROTEIN: zinc finger protein 11-like [Benincasa hispida]8.9e-3051.1Show/hide
Query:  LSSGKVK---EKWDCVQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPEN------SCPNPNFYSPHP---------
        + +GK K   ++W  V+E+T    +QF WPAKNY CNFC+REFKSAQALGGHMNVHRRDR R+RLLPSWVP+N      S PNPN  +P+P         
Subjt:  LSSGKVK---EKWDCVQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPEN------SCPNPNFYSPHP---------

Query:  -TFFSSTSSSGPQTHQDH-----RLCFTNQKH------HDDDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL
         TF SS  +S     QD        C  N  +      HD D +V  V KK KK LVNLELKMG      SNED LDLEL L
Subjt:  -TFFSSTSSSGPQTHQDH-----RLCFTNQKH------HDDDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL

TrEMBL top hitse value%identityAlignment
A0A0A0L7I0 C2H2-type domain-containing protein2.4e-2850.92Show/hide
Query:  HQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPEN-------SCPNPNFYSPHPTFFSSTSSSG---------PQTHQDHRLCFTN
        ++F WPAKNY CNFC+REFKSAQALGGHMNVHRRDRAR+RLLPSWV +N       SCPNPNF +  P+ F+  SSS           Q  ++   C  N
Subjt:  HQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPEN-------SCPNPNFYSPHPTFFSSTSSSG---------PQTHQDHRLCFTN

Query:  ---------------QKHHDDD-QEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL
                       Q+H DDD  +V  V KK KK +VNLELKMG      SN + LDLEL L
Subjt:  ---------------QKHHDDD-QEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL

A0A1S3C0E4 transcriptional regulator SUPERMAN-like3.7e-2951.16Show/hide
Query:  VQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPEN-------SCPNPNFYSPHPTFFSSTSSSG---------PQTH
        V+E T    ++F WPAKNY CNFC+REFKSAQALGGHMNVHRRDRAR+RLLPSWV +N       SCPNPNF +  P+ F+  SSS           Q  
Subjt:  VQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPEN-------SCPNPNFYSPHPTFFSSTSSSG---------PQTH

Query:  QDHRLCFTNQKH--------HDD--------DQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL
        ++   C  N  +        HDD        DQ + V KKK KKSLVNLELKMG      SN + LDLEL L
Subjt:  QDHRLCFTNQKH--------HDD--------DQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL

A0A5D3B8Q5 Transcriptional regulator SUPERMAN-like3.7e-2951.16Show/hide
Query:  VQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPEN-------SCPNPNFYSPHPTFFSSTSSSG---------PQTH
        V+E T    ++F WPAKNY CNFC+REFKSAQALGGHMNVHRRDRAR+RLLPSWV +N       SCPNPNF +  P+ F+  SSS           Q  
Subjt:  VQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPEN-------SCPNPNFYSPHPTFFSSTSSSG---------PQTH

Query:  QDHRLCFTNQKH--------HDD--------DQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL
        ++   C  N  +        HDD        DQ + V KKK KKSLVNLELKMG      SN + LDLEL L
Subjt:  QDHRLCFTNQKH--------HDD--------DQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL

A0A6J1CY18 zinc finger protein 3-like1.2e-88100Show/hide
Query:  MDGALLSSGKVKEKWDCVQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNFYSPHPTFFSSTSSSGPQT
        MDGALLSSGKVKEKWDCVQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNFYSPHPTFFSSTSSSGPQT
Subjt:  MDGALLSSGKVKEKWDCVQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNFYSPHPTFFSSTSSSGPQT

Query:  HQDHRLCFTNQKHHDDDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL
        HQDHRLCFTNQKHHDDDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL
Subjt:  HQDHRLCFTNQKHHDDDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL

A0A6J1HH25 zinc finger protein 11-like8.7e-3152.26Show/hide
Query:  KEKWDCVQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNF-----YSPHPTFFSSTSSS----GPQTHQ
        + +W  V +      +QF WPAKNY+CNFC+REFKSAQALGGHMNVHRRDRAR+RLLPSW+ +NS PNPN       + + +  S+T       G  +  
Subjt:  KEKWDCVQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNF-----YSPHPTFFSSTSSS----GPQTHQ

Query:  DHRLCFTNQKHHDDDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL
        +++  F++Q  HDD   + V+KKK KK+LVNLELKMG    + SNED LDLEL L
Subjt:  DHRLCFTNQKHHDDDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 102.3e-1283.33Show/hide
Query:  WPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLR
        WP ++Y C+FCRREFKSAQALGGHMNVHRRDRARL+
Subjt:  WPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLR

Q38895 Transcriptional regulator SUPERMAN7.6e-1656.16Show/hide
Query:  FPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNFYSPHPTFFSSTSSSGPQTH
        F WP ++Y C+FC+REF+SAQALGGHMNVHRRDRARLRL  S    +S P+P +  P+P +  ST ++ P  H
Subjt:  FPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNFYSPHPTFFSSTSSSGPQTH

Q9LHS9 Probable transcriptional regulator RABBIT EARS1.1e-1180.56Show/hide
Query:  WPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLR
        WP ++Y+C+FC REFKSAQALGGHMNVHRRDRARL+
Subjt:  WPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLR

Q9SLB8 Zinc finger protein 118.7e-2060Show/hide
Query:  PWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWV--PENSCPNPNFYSPHPTFFSSTSSSGPQTHQDHRLCFTNQK
        PWP KNY C+FCRREF+SAQALGGHMNVHRRDRA+LR +PSW+  P +  P  N   P+P F SS+SSS    H +  L  TNQ+
Subjt:  PWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWV--PENSCPNPNFYSPHPTFFSSTSSSGPQTHQDHRLCFTNQK

Q9SR34 Transcriptional regulator TAC11.3e-0767.65Show/hide
Query:  AKNYACNFCRREFKSAQALGGHMNVHRRDRARLR
        +++Y C+FC R F +AQALGGHMN+HRRDRA+LR
Subjt:  AKNYACNFCRREFKSAQALGGHMNVHRRDRARLR

Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 101.6e-1383.33Show/hide
Query:  WPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLR
        WP ++Y C+FCRREFKSAQALGGHMNVHRRDRARL+
Subjt:  WPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLR

AT2G42410.1 zinc finger protein 116.2e-2160Show/hide
Query:  PWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWV--PENSCPNPNFYSPHPTFFSSTSSSGPQTHQDHRLCFTNQK
        PWP KNY C+FCRREF+SAQALGGHMNVHRRDRA+LR +PSW+  P +  P  N   P+P F SS+SSS    H +  L  TNQ+
Subjt:  PWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWV--PENSCPNPNFYSPHPTFFSSTSSSGPQTHQDHRLCFTNQK

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein5.4e-1756.16Show/hide
Query:  FPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNFYSPHPTFFSSTSSSGPQTH
        F WP ++Y C+FC+REF+SAQALGGHMNVHRRDRARLRL  S    +S P+P +  P+P +  ST ++ P  H
Subjt:  FPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNFYSPHPTFFSSTSSSGPQTH

AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein1.1e-1280.56Show/hide
Query:  WPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLR
        WP ++Y CNFCRREF+SAQALGGHMNVHRRDRA  R
Subjt:  WPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLR

AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein8.1e-1380.56Show/hide
Query:  WPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLR
        WP ++Y+C+FC REFKSAQALGGHMNVHRRDRARL+
Subjt:  WPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAGCTTTGTTGAGCAGTGGGAAGGTGAAGGAGAAATGGGATTGTGTACAGGAACAAACTTTATGTGATGATCATCAGTTCCCATGGCCTGCAAAAAACTATGC
TTGTAATTTTTGCAGGAGAGAATTCAAGTCTGCTCAGGCCCTTGGTGGCCACATGAATGTCCATAGGAGGGACAGGGCAAGATTGAGACTTTTGCCCTCTTGGGTGCCTG
AAAATTCTTGCCCTAACCCTAATTTCTATTCTCCACACCCCACTTTCTTCAGCTCAACTTCTTCCTCAGGCCCCCAAACTCACCAAGATCACCGCTTGTGTTTCACCAAC
CAAAAACATCATGATGACGATCAAGAAGTTCAAGTTGTGAAGAAGAAGATCAAGAAAAGTTTGGTCAATTTAGAACTCAAGATGGGCATTCATCATTTGGAAGGTTCAAA
TGAGGATGGCCTCGATTTGGAGCTTCGTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGGAGCTTTGTTGAGCAGTGGGAAGGTGAAGGAGAAATGGGATTGTGTACAGGAACAAACTTTATGTGATGATCATCAGTTCCCATGGCCTGCAAAAAACTATGC
TTGTAATTTTTGCAGGAGAGAATTCAAGTCTGCTCAGGCCCTTGGTGGCCACATGAATGTCCATAGGAGGGACAGGGCAAGATTGAGACTTTTGCCCTCTTGGGTGCCTG
AAAATTCTTGCCCTAACCCTAATTTCTATTCTCCACACCCCACTTTCTTCAGCTCAACTTCTTCCTCAGGCCCCCAAACTCACCAAGATCACCGCTTGTGTTTCACCAAC
CAAAAACATCATGATGACGATCAAGAAGTTCAAGTTGTGAAGAAGAAGATCAAGAAAAGTTTGGTCAATTTAGAACTCAAGATGGGCATTCATCATTTGGAAGGTTCAAA
TGAGGATGGCCTCGATTTGGAGCTTCGTCTTTAG
Protein sequenceShow/hide protein sequence
MDGALLSSGKVKEKWDCVQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNFYSPHPTFFSSTSSSGPQTHQDHRLCFTN
QKHHDDDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL