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Moc06g34710 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g34710
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionnuclear transcription factor Y subunit B-4-like
Genome locationchr6:26324453..26324872
RNA-Seq ExpressionMoc06g34710
SyntenyMoc06g34710
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold
IPR027113 - Transcription factor NFYB/HAP3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590402.1 Nuclear transcription factor Y subunit B-4, partial [Cucurbita argyrosperma subsp. sororia]5.7e-3661.76Show/hide
Query:  MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK
        MG++N ++LQLP ANVGRLMKKI+PQ +KISKEAK TMQECATEFISFVTSEAAEKC+++NRRTLNG+DI WAFG+ GLDNYA+A+AKYLL YRD + + 
Subjt:  MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK

Query:  IHNKHCGFQQQGEHNNHDDNGDDDGKFYLANKGESS
          N         E   HD   + + +FY    GE+S
Subjt:  IHNKHCGFQQQGEHNNHDDNGDDDGKFYLANKGESS

XP_022145916.1 nuclear transcription factor Y subunit B-4-like [Momordica charantia]2.0e-73100Show/hide
Query:  MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK
        MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK
Subjt:  MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK

Query:  IHNKHCGFQQQGEHNNHDDNGDDDGKFYLANKGESSQTN
        IHNKHCGFQQQGEHNNHDDNGDDDGKFYLANKGESSQTN
Subjt:  IHNKHCGFQQQGEHNNHDDNGDDDGKFYLANKGESSQTN

XP_022961414.1 nuclear transcription factor Y subunit B-4-like [Cucurbita moschata]5.7e-3661.76Show/hide
Query:  MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK
        MG++N ++LQLP ANVGRLMKKI+PQ +KISKEAK TMQECATEFISFVTSEAAEKC+++NRRTLNG+DI WAFG+ GLDNYA+A+AKYLL YRD + + 
Subjt:  MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK

Query:  IHNKHCGFQQQGEHNNHDDNGDDDGKFYLANKGESS
           K     +Q +H       D + +FY    GE+S
Subjt:  IHNKHCGFQQQGEHNNHDDNGDDDGKFYLANKGESS

XP_023546470.1 nuclear transcription factor Y subunit B-4-like [Cucurbita pepo subsp. pepo]1.3e-3559.85Show/hide
Query:  MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK
        MG++N ++LQLP ANVGRLMKKI+PQ +KISKEAK TMQECATEFISFVTSEAAEKC+++NRRTLNG+DI WAFG+ GLDNYA+A+AKYLL YRD + + 
Subjt:  MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK

Query:  IHNKHCGFQQQGEHNNHDDNGDDDGKFYLANKGESSQ
           K     +Q  H+   +   +  +    N GE+S+
Subjt:  IHNKHCGFQQQGEHNNHDDNGDDDGKFYLANKGESSQ

XP_038880507.1 nuclear transcription factor Y subunit B-4-like [Benincasa hispida]1.5e-3665.55Show/hide
Query:  DNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHN
        +NWE LQLP ANVGR+MKKI+PQ +KISKEAK+TMQECA+EFISFV SEAAEKC++ENRRTLNG+DI WA G+ GLDNYA+ +AKYLL +R+A+ +K  N
Subjt:  DNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHN

Query:  KHCGFQQQGEHNNHDDNGD
        K   FQ   +    DDN +
Subjt:  KHCGFQQQGEHNNHDDNGD

TrEMBL top hitse value%identityAlignment
A0A1S3BQ87 Beta-galactosidase8.8e-3562.31Show/hide
Query:  DNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHN
        +NWE LQLP ANV R+MKKIIPQ  KISKEAK+TMQECA EFISFVTSEAA+KC+ ENRRTLNG+DIYWAFG+LGLDNYA+A++  LL +R+A+ +K  +
Subjt:  DNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHN

Query:  KHCGFQQQGEHNNHDDNGDDDGKFYLANKG
        K   FQ    H+ H    D D  F+  ++G
Subjt:  KHCGFQQQGEHNNHDDNGDDDGKFYLANKG

A0A5D3CFV4 Beta-galactosidase 15-like1.5e-3462.9Show/hide
Query:  DNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHN
        +NWE LQLP ANV R+MKKIIPQ  KISKEAK+TMQECA EFISFVTSEAA+KC+ ENRRTLNG+DIYWAFG+LGLDNYA+A++  LL +R+A+ +K  +
Subjt:  DNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHN

Query:  KHCGFQQQGEHNNHDDNGDDDGKF
        K   FQ       H  +G +D ++
Subjt:  KHCGFQQQGEHNNHDDNGDDDGKF

A0A6J1CXT8 nuclear transcription factor Y subunit B-4-like9.6e-74100Show/hide
Query:  MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK
        MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK
Subjt:  MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK

Query:  IHNKHCGFQQQGEHNNHDDNGDDDGKFYLANKGESSQTN
        IHNKHCGFQQQGEHNNHDDNGDDDGKFYLANKGESSQTN
Subjt:  IHNKHCGFQQQGEHNNHDDNGDDDGKFYLANKGESSQTN

A0A6J1HDY6 nuclear transcription factor Y subunit B-4-like2.7e-3661.76Show/hide
Query:  MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK
        MG++N ++LQLP ANVGRLMKKI+PQ +KISKEAK TMQECATEFISFVTSEAAEKC+++NRRTLNG+DI WAFG+ GLDNYA+A+AKYLL YRD + + 
Subjt:  MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK

Query:  IHNKHCGFQQQGEHNNHDDNGDDDGKFYLANKGESS
           K     +Q +H       D + +FY    GE+S
Subjt:  IHNKHCGFQQQGEHNNHDDNGDDDGKFYLANKGESS

A0A6J1HUN8 nuclear transcription factor Y subunit B-4-like1.4e-3558.74Show/hide
Query:  MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK
        MG++N ++LQLP ANVGRLMKKI+PQ +KISKEAK TMQECATEFISFVTSEAAEKC+++NRRTLNG+DI WAFG+ GLDNYA+A+AKYLL YRD + + 
Subjt:  MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK

Query:  IHNKHCGFQQQGEH-------NNHDDNGDDDGKFYLANKGESS
           K    ++Q EH          +   + + +FY    GE+S
Subjt:  IHNKHCGFQQQGEH-------NNHDDNGDDDGKFYLANKGESS

SwissProt top hitse value%identityAlignment
O04027 Nuclear transcription factor Y subunit B-41.3e-3058.02Show/hide
Query:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKI-HNKHCGFQ
        LP ANVGRLMK+I+P  +KISKEAKQT+QECATEFISFVT EA+EKC+RENR+T+NG+DI+WA   LGLDNYADA  ++L  YR+A+  +  HNK  G  
Subjt:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKI-HNKHCGFQ

Query:  QQG---EHNNHDDNGDDDGKFY-LANKGESS
          G   E N   D  +   KF  +  KG SS
Subjt:  QQG---EHNNHDDNGDDDGKFY-LANKGESS

O23310 Nuclear transcription factor Y subunit B-37.5e-2352.22Show/hide
Query:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK
        LP ANV R+MKK +P  +KISK+AK+T+QEC +EFISF+T EA++KC RE R+T+NG+D+ WA   LG ++Y +    YL  YR+ +  K
Subjt:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK

O82248 Nuclear transcription factor Y subunit B-51.4e-2461.9Show/hide
Query:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYR
        LP ANVGR+MK I+P  +K+SKEAK+TMQEC +EFISFVT EA++KC++E R+T+NG+DI WA   LG D+YA    KYL  YR
Subjt:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYR

Q67XJ2 Nuclear transcription factor Y subunit B-103.3e-2354.02Show/hide
Query:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQ
        LP AN+ R+MK+ +P   KI+K+AK+TMQEC +EFISFVTSEA++KC RE R+T+NG+D+ WA   LG ++Y D    YL+ YR+ +
Subjt:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQ

Q9SIT9 Nuclear transcription factor Y subunit B-78.0e-2549.56Show/hide
Query:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHN-------
        LP ANVGR+MKK++P   KISK+AK+T+QEC +EFISFVT EA++KC RE R+T+NG+DI WA   LG ++Y      YL  YRD +  K+++       
Subjt:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHN-------

Query:  -KHCGFQQQGEHN
         +    QQQ  HN
Subjt:  -KHCGFQQQGEHN

Arabidopsis top hitse value%identityAlignment
AT1G09030.1 nuclear factor Y, subunit B49.0e-3258.02Show/hide
Query:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKI-HNKHCGFQ
        LP ANVGRLMK+I+P  +KISKEAKQT+QECATEFISFVT EA+EKC+RENR+T+NG+DI+WA   LGLDNYADA  ++L  YR+A+  +  HNK  G  
Subjt:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKI-HNKHCGFQ

Query:  QQG---EHNNHDDNGDDDGKFY-LANKGESS
          G   E N   D  +   KF  +  KG SS
Subjt:  QQG---EHNNHDDNGDDDGKFY-LANKGESS

AT2G13570.1 nuclear factor Y, subunit B75.7e-2649.56Show/hide
Query:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHN-------
        LP ANVGR+MKK++P   KISK+AK+T+QEC +EFISFVT EA++KC RE R+T+NG+DI WA   LG ++Y      YL  YRD +  K+++       
Subjt:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHN-------

Query:  -KHCGFQQQGEHN
         +    QQQ  HN
Subjt:  -KHCGFQQQGEHN

AT2G47810.1 nuclear factor Y, subunit B59.7e-2661.9Show/hide
Query:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYR
        LP ANVGR+MK I+P  +K+SKEAK+TMQEC +EFISFVT EA++KC++E R+T+NG+DI WA   LG D+YA    KYL  YR
Subjt:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYR

AT3G53340.1 nuclear factor Y, subunit B102.4e-2454.02Show/hide
Query:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQ
        LP AN+ R+MK+ +P   KI+K+AK+TMQEC +EFISFVTSEA++KC RE R+T+NG+D+ WA   LG ++Y D    YL+ YR+ +
Subjt:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQ

AT4G14540.1 nuclear factor Y, subunit B35.3e-2452.22Show/hide
Query:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK
        LP ANV R+MKK +P  +KISK+AK+T+QEC +EFISF+T EA++KC RE R+T+NG+D+ WA   LG ++Y +    YL  YR+ +  K
Subjt:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGACGACAATTGGGAAAAGCTTCAGCTGCCAAGTGCTAACGTTGGAAGATTGATGAAGAAGATAATTCCTCAAACGTCAAAGATTTCTAAAGAAGCCAAACAGAC
AATGCAAGAATGTGCAACAGAGTTCATCAGCTTCGTGACAAGTGAAGCTGCAGAAAAGTGTAACAGAGAGAATCGTAGAACTCTCAACGGAGAAGACATTTATTGGGCTT
TTGGTGCTCTTGGCTTGGATAACTATGCCGACGCTACCGCCAAGTACTTGCTCAACTACAGGGACGCCCAAACAATGAAGATTCATAACAAACATTGTGGATTTCAACAA
CAAGGAGAACATAACAACCATGACGACAACGGTGACGACGACGGGAAATTTTATCTGGCTAACAAGGGTGAAAGTTCTCAAACAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGACGACAATTGGGAAAAGCTTCAGCTGCCAAGTGCTAACGTTGGAAGATTGATGAAGAAGATAATTCCTCAAACGTCAAAGATTTCTAAAGAAGCCAAACAGAC
AATGCAAGAATGTGCAACAGAGTTCATCAGCTTCGTGACAAGTGAAGCTGCAGAAAAGTGTAACAGAGAGAATCGTAGAACTCTCAACGGAGAAGACATTTATTGGGCTT
TTGGTGCTCTTGGCTTGGATAACTATGCCGACGCTACCGCCAAGTACTTGCTCAACTACAGGGACGCCCAAACAATGAAGATTCATAACAAACATTGTGGATTTCAACAA
CAAGGAGAACATAACAACCATGACGACAACGGTGACGACGACGGGAAATTTTATCTGGCTAACAAGGGTGAAAGTTCTCAAACAAATTAG
Protein sequenceShow/hide protein sequence
MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHCGFQQ
QGEHNNHDDNGDDDGKFYLANKGESSQTN