CuGenDBv2

Gene ID	Moc06g35150
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Reverse transcriptase domain-containing protein
Genome location	chr6:26800747..26809372
RNA-Seq Expression	Moc06g35150
Synteny	Moc06g35150
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0005739 - mitochondrion (cellular component) GO:0016020 - membrane (cellular component) GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

GEU30309.1 reverse transcriptase domain-containing protein [Tanacetum cinerariifolium]

3.4e-33

90.91

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Query:  VGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLAL
        +GALAGDPGCFPLDDEAYPPSSHWPTLTPVILR+YLV RVCL L PLSRPAPKQCFT RCPVN CASTHFGENQLAL
Subjt:  VGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLAL

KAG4211951.1 hypothetical protein ERO13_A02G134101v2 [Gossypium hirsutum]

1.7e-32

89.61

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Query:  VGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLAL
        +GALAGDPGCFPLDDEAYPPSSHWPT TPVILR+YLV RVCL L PLSRPAPKQCFT RCPVN CASTHFGENQLAL
Subjt:  VGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLAL

KAG8363221.1 hypothetical protein BUALT_BualtPtG0005500 [Buddleja alternifolia]

9.9e-33

89.61

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Query:  VGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLAL
        +GALAGDPGCFPLDDEAYPPSSHWPTLTPVI R+YLV RVCL L PLSRPAPKQCFT RCPVN CASTHFGENQLAL
Subjt:  VGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLAL

KAG8369105.1 hypothetical protein BUALT_Bualt15G0116000 [Buddleja alternifolia]

2.9e-32

89.61

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Query:  VGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLAL
        +GALAGDPGCFPLDDEAYPPSSHWPTLTPVILR+YLV RVCL L PLSRPA KQCFT RCPVN CASTHFGENQLAL
Subjt:  VGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLAL

PLY86165.1 hypothetical protein LSAT_6X94260 [Lactuca sativa]

3.4e-33

90.91

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Query:  VGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLAL
        +GALAGDPGCFPLDDEAYPPSSHWPTLTPVILR+YLV RVCL L PLSRPAPKQCFT RCPVN CASTHFGENQLAL
Subjt:  VGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLAL

TrEMBL top hits

e value

%identity

Alignment

A0A2N9HF66 Uncharacterized protein

1.3e-33

89.74

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Query:  IVGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLAL
        + GALAGDPGCFPLDDEAYPPSSHWPTLTPVILR+YLV RVCL L PLSRPAPKQCFT RCPVN CASTHFGENQLAL
Subjt:  IVGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLAL

A0A2N9HQM6 Uncharacterized protein

1.3e-33

89.74

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Query:  IVGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLAL
        + GALAGDPGCFPLDDEAYPPSSHWPTLTPVILR+YLV RVCL L PLSRPAPKQCFT RCPVN CASTHFGENQLAL
Subjt:  IVGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLAL

A0A2N9I3B0 Uncharacterized protein

1.6e-33

90.91

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Query:  VGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLAL
        +GALAGDPGCFPLDDEAYPPSSHWPTLTPVILR+YLV RVCL L PLSRPAPKQCFT RCPVN CASTHFGENQLAL
Subjt:  VGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLAL

A0A2N9I7K2 Uncharacterized protein

1.6e-33

90.91

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Query:  VGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLAL
        +GALAGDPGCFPLDDEAYPPSSHWPTLTPVILR+YLV RVCL L PLSRPAPKQCFT RCPVN CASTHFGENQLAL
Subjt:  VGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLAL

A0A6L2J018 Reverse transcriptase domain-containing protein

1.6e-33

90.91

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Query:  VGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLAL
        +GALAGDPGCFPLDDEAYPPSSHWPTLTPVILR+YLV RVCL L PLSRPAPKQCFT RCPVN CASTHFGENQLAL
Subjt:  VGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLAL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGAGTACGTGCTGGTCGGCTCTAATGGCGGGCGGGAGGGCGCAGTGCACGTGCAGGAACGCGTCGCAGTGAAGGCAGCGGCAGAAGGTGGGAAAACTGATTCCCTCGT
CGCAGAGAGCGCAGATGAGATGCTTGTGCTCGGATTTTCTGCGGAGGAGGAGGAGAGGGTGGGGGTGGTGGCCGACGGCGAGGGGCGGCACGGCGGCGCACCCGGCGTCC
AGGGAGAAGGGGCAGGACAGGCAGTGGAAGGACGGGCCGCAGGAGGGGACGGCGCACCCGGCGCAGGGGAAGAACCCGGTGGACCGGAACAGGATTCCGGCGATGGACTG
GTCGGAGAATTCCTGCAGGCTGATCATGAAGTGGCGGTGAAGGGTGTCAAGGGAGTCTATGAAGGCGAGGGGGTGGCCGTGGCGGTGGTGGAGCGGGTGCGCCGCCTGGA
GTTGGACTCTGTATGTGATGTTCCGGCCGTCGTCGCCGTCGCTCACGGTAGGGCTCTCGTCGGAACTCATGGCTTATGTTGTGGAAGGTCGGGTGCGAGTGAGAGAGGGG
AGGGGGTGGAAGTTCCCGGGCTTGGGGATGTCGGTGGTCCCTTGGACCCAAGTATGGCATACTGCTCTCTTTGGACGTCTCATATAAGGAAAAACTCCTCTCTCTCCATA
TATATGGAGAAGGCTGCCAACCCTATTGTAGGTGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCGACGACGAAGCTTATCCCCCATCGTCTCACTGGCCGACCTTGAC
CCCTGTTATTTTGAGAACATATCTAGTATCCAGAGTTTGCCTTTATTTGGAACCGCTCTCGCGGCCCGCACCGAAACAGTGCTTTACCTCTAGATGTCCAGTCAACTACT
GCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTAGACAACAGAAGAGAGAGAATTTCGGGCTCGGCCTCGAGTAGGGATATTCGGTGGGTTGACATCGGAACCGAG
CGAAAGAGATCGGGTGGCGTCCTGACCCGGAGGCCAAGACTAGAAACCGGCGCCGAGGTGGGTCAGTCTTCAAGAATGGGCTGGCACTTTCGTTATGGGTCGACCCTCTT
TGTCGATGATCTCGGGCTTCACGGTCCGGCCTCTCGTCTCGCTTGGACCATTTTTGCTCACTATAACAAGATCGACAAATATTTACAAATTTATGTGCGCTAA

mRNA sequence

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Protein sequence

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MEYVLVGSNGGREGAVHVQERVAVKAAAEGGKTDSLVAESADEMLVLGFSAEEEERVGVVADGEGRHGGAPGVQGEGAGQAVEGRAAGGDGAPGAGEEPGGPEQDSGDGL
VGEFLQADHEVAVKGVKGVYEGEGVAVAVVERVRRLELDSVCDVPAVVAVAHGRALVGTHGLCCGRSGASERGEGVEVPGLGDVGGPLDPSMAYCSLWTSHIRKNSSLSI
YMEKAANPIVGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRTYLVSRVCLYLEPLSRPAPKQCFTSRCPVNYCASTHFGENQLALDNRRERISGSASSRDIRWVDIGTE
RKRSGGVLTRRPRLETGAEVGQSSRMGWHFRYGSTLFVDDLGLHGPASRLAWTIFAHYNKIDKYLQIYVR

Moc06g35150 (gene) of Bitter gourd (OHB3-1) v2 genome