CuGenDBv2

Gene ID	Moc06g37190
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	tetratricopeptide repeat protein 4 homolog
Genome location	chr6:28565607..28567119
RNA-Seq Expression	Moc06g37190
Synteny	Moc06g37190
Gene Ontology terms	GO:0051879 - Hsp90 protein binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008447360.1 PREDICTED: tetratricopeptide repeat protein 4 homolog [Cucumis melo]

3.8e-55

80.31

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Query:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP
        MF+EGCPPLPWD ENKYTREAVELYYE GSGICLSK  I+R+ LEGTAASNA+++ LDEKDA+E SNH TSAN+GSSKWIKV+E+RTLH+VLK PN +IP
Subjt:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP

Query:  GIPVFYVVWRNSKFYKDFKAGRWGPPS
        GIPVFY+V RNSKFYKDFKAGRW PPS
Subjt:  GIPVFYVVWRNSKFYKDFKAGRWGPPS

XP_011651622.1 tetratricopeptide repeat protein 4 homolog [Cucumis sativus]

2.3e-52

78.74

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Query:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP
        MF+E CPPLPWD ENKYTREA+ELYYE GSGICLSK  I+R+ LEGTAASNAE++ L+  DA+E SNH TSAN+GSSKWIKV+E+RTLHDVLK PN +IP
Subjt:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP

Query:  GIPVFYVVWRNSKFYKDFKAGRWGPPS
        GIPVFYVV RNSKFYKDFKAGRW PPS
Subjt:  GIPVFYVVWRNSKFYKDFKAGRWGPPS

XP_022159855.1 tetratricopeptide repeat protein 4 homolog isoform X1 [Momordica charantia]

2.5e-70

100

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Query:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP
        MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP
Subjt:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP

Query:  GIPVFYVVWRNSKFYKDFKAGRWGPPS
        GIPVFYVVWRNSKFYKDFKAGRWGPPS
Subjt:  GIPVFYVVWRNSKFYKDFKAGRWGPPS

XP_022159856.1 tetratricopeptide repeat protein 4 homolog isoform X2 [Momordica charantia]

2.5e-70

100

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Query:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP
        MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP
Subjt:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP

Query:  GIPVFYVVWRNSKFYKDFKAGRWGPPS
        GIPVFYVVWRNSKFYKDFKAGRWGPPS
Subjt:  GIPVFYVVWRNSKFYKDFKAGRWGPPS

XP_022967280.1 tetratricopeptide repeat protein 4 homolog [Cucurbita maxima]

3.3e-51

79.53

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Query:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP
        MFSE CPPLPWD ENKYTREAVELYYE GSGICLSK  I+R+LLEGTAASN E++ LDEKD +E SNH TSA+  SSKWIKV+EK TLHDVLK PN +IP
Subjt:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP

Query:  GIPVFYVVWRNSKFYKDFKAGRWGPPS
        GIPVFYVV RNSKFYK+FKAGRW PPS
Subjt:  GIPVFYVVWRNSKFYKDFKAGRWGPPS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BHV4 tetratricopeptide repeat protein 4 homolog

1.8e-55

80.31

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Query:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP
        MF+EGCPPLPWD ENKYTREAVELYYE GSGICLSK  I+R+ LEGTAASNA+++ LDEKDA+E SNH TSAN+GSSKWIKV+E+RTLH+VLK PN +IP
Subjt:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP

Query:  GIPVFYVVWRNSKFYKDFKAGRWGPPS
        GIPVFY+V RNSKFYKDFKAGRW PPS
Subjt:  GIPVFYVVWRNSKFYKDFKAGRWGPPS

A0A6J1DZY6 tetratricopeptide repeat protein 4 homolog isoform X1

1.2e-70

100

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Query:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP
        MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP
Subjt:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP

Query:  GIPVFYVVWRNSKFYKDFKAGRWGPPS
        GIPVFYVVWRNSKFYKDFKAGRWGPPS
Subjt:  GIPVFYVVWRNSKFYKDFKAGRWGPPS

A0A6J1E576 tetratricopeptide repeat protein 4 homolog isoform X2

1.2e-70

100

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Query:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP
        MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP
Subjt:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP

Query:  GIPVFYVVWRNSKFYKDFKAGRWGPPS
        GIPVFYVVWRNSKFYKDFKAGRWGPPS
Subjt:  GIPVFYVVWRNSKFYKDFKAGRWGPPS

A0A6J1HFS8 tetratricopeptide repeat protein 4 homolog

2.8e-51

78.74

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Query:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP
        MFSE CPPLPWD ENKYTREAVELYYE GSGICLSK  I+R+LLEGTAASN E++ LDEKD +E SNH TSA+  SSKWIKV+EK TLHDVLK PN ++P
Subjt:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP

Query:  GIPVFYVVWRNSKFYKDFKAGRWGPPS
        GIPVFYVV RNSKFYK+FKAGRW PPS
Subjt:  GIPVFYVVWRNSKFYKDFKAGRWGPPS

A0A6J1HU00 tetratricopeptide repeat protein 4 homolog

1.6e-51

79.53

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Query:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP
        MFSE CPPLPWD ENKYTREAVELYYE GSGICLSK  I+R+LLEGTAASN E++ LDEKD +E SNH TSA+  SSKWIKV+EK TLHDVLK PN +IP
Subjt:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP

Query:  GIPVFYVVWRNSKFYKDFKAGRWGPPS
        GIPVFYVV RNSKFYK+FKAGRW PPS
Subjt:  GIPVFYVVWRNSKFYKDFKAGRWGPPS

SwissProt top hits

e value

%identity

Alignment

Q54M20 Tetratricopeptide repeat protein 4 homolog

1.5e-06

27.52

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Query:  PWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIPGIPVFYVVW
        PWD + +YT + +E+Y+E          N  + +L                        D    E   KWI+V     +  V+  P  +IP IP+FY+V 
Subjt:  PWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIPGIPVFYVVW

Query:  RNSKFYKDF
        R + FYK F
Subjt:  RNSKFYKDF

Arabidopsis top hits

e value

%identity

Alignment

AT1G04130.1 Tetratricopeptide repeat (TPR)-like superfamily protein

2.3e-34

51.97

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Query:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP
        MFSE  PPLPWD  N+Y+R+ +ELYYE  SG  L +  ++++LLEGT  S AE    ++  A +  ++     +GSS  +KVNE+RTLHDVLK P  +IP
Subjt:  MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIP

Query:  GIPVFYVVWRNSKFYKDFKAGRWGPPS
         IPVFY+V + SKFYKDF AG+W PP+
Subjt:  GIPVFYVVWRNSKFYKDFKAGRWGPPS

Sequences

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CDS sequence

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ATGTTTTCAGAAGGTTGTCCACCTTTGCCATGGGATGTAGAGAACAAATATACCCGTGAAGCTGTTGAATTATACTATGAGGTTGGTTCAGGAATTTGTTTATCAAAAGT
AAATATTATACGACATCTTCTAGAGGGAACTGCTGCTTCTAATGCAGAAAACCTCGTACTTGACGAGAAAGATGCAATTGAATGTTCAAATCATGACACTTCTGCAAATG
AAGGCTCTTCTAAATGGATCAAAGTTAACGAAAAAAGAACGCTTCACGACGTTCTAAAGGCGCCTAACTGCCTCATACCAGGAATACCAGTCTTTTATGTTGTTTGGAGG
AACTCAAAATTTTACAAAGATTTCAAAGCTGGGAGATGGGGTCCTCCTTCGTGA

mRNA sequence

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Protein sequence

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MFSEGCPPLPWDVENKYTREAVELYYEVGSGICLSKVNIIRHLLEGTAASNAENLVLDEKDAIECSNHDTSANEGSSKWIKVNEKRTLHDVLKAPNCLIPGIPVFYVVWR
NSKFYKDFKAGRWGPPS

Moc06g37190 (gene) of Bitter gourd (OHB3-1) v2 genome