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Moc06g38320 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g38320
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionU11/U12 small nuclear ribonucleoprotein 48 kDa protein
Genome locationchr6:29648758..29655213
RNA-Seq ExpressionMoc06g38320
SyntenyMoc06g38320
Gene Ontology termsGO:0016102 - diterpenoid biosynthetic process (biological process)
GO:0000287 - magnesium ion binding (molecular function)
GO:0010333 - terpene synthase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144020.1 (-)-germacrene D synthase-like [Momordica charantia]5.5e-1190.91Show/hide
Query:  SASCVDHLPLKTLTILPSLELALYALVKYSFQLNDLQLLHGNHS
        SAS VDHLPLKTL I+PSLELALYALVKYS QLNDLQLLHGNHS
Subjt:  SASCVDHLPLKTLTILPSLELALYALVKYSFQLNDLQLLHGNHS
XP_022151686.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Momordica charantia]2.6e-2176.62Show/hide
Query:  SASCVDHLPLKTLTILPSLELALYALVKYSFQLNDLQLLHGNHSGLAGRTTLDKVAAMVLQVLELVDDFEIILITAR
        SASC+ HLPLKTL ILPSLELA+YALVKYS QLNDLQLL GNHSGLAGRTT DKV A+ L+V EL+D  EII IT +
Subjt:  SASCVDHLPLKTLTILPSLELALYALVKYSFQLNDLQLLHGNHSGLAGRTTLDKVAAMVLQVLELVDDFEIILITAR
TrEMBL top hitse value%identityAlignment
A0A6J1CQG9 (-)-germacrene D synthase-like2.6e-1190.91Show/hide
Query:  SASCVDHLPLKTLTILPSLELALYALVKYSFQLNDLQLLHGNHS
        SAS VDHLPLKTL I+PSLELALYALVKYS QLNDLQLLHGNHS
Subjt:  SASCVDHLPLKTLTILPSLELALYALVKYSFQLNDLQLLHGNHS
A0A6J1DFF2 U11/U12 small nuclear ribonucleoprotein 48 kDa protein1.3e-2176.62Show/hide
Query:  SASCVDHLPLKTLTILPSLELALYALVKYSFQLNDLQLLHGNHSGLAGRTTLDKVAAMVLQVLELVDDFEIILITAR
        SASC+ HLPLKTL ILPSLELA+YALVKYS QLNDLQLL GNHSGLAGRTT DKV A+ L+V EL+D  EII IT +
Subjt:  SASCVDHLPLKTLTILPSLELALYALVKYSFQLNDLQLLHGNHSGLAGRTTLDKVAAMVLQVLELVDDFEIILITAR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCGTTCGTCGTGTTAGAGTGGGTCGCTGGACTCTTGGTCGTCGTCAGTCAATTACCGGAGGATGGTCTCAAGGCAGCAATGGAGGTCGTGAGTGCTTCATGTGT
TGACCATCTTCCTTTGAAAACTTTAACCATCCTGCCTTCATTAGAACTTGCACTTTATGCTTTAGTGAAGTACAGTTTTCAGTTGAATGACCTACAACTCCTGCATGGTA
ATCACAGTGGACTTGCGGGTCGTACTACTTTGGATAAGGTGGCTGCAATGGTTCTACAGGTACTGGAGCTAGTAGATGACTTTGAAATAATTCTGATAACAGCTCGAGCC
GATGAGTTTATGGGTACTGTAGACGGATTGTATACCGCAGATCCTTGTTGGTACCTCCACTTGCGCTTCGAGATTACTGTCTGGACTTTATTTTTCCTTTTGATGAAGCT
TTTATTTTGTGGCTCTTTATCAATTAAAGGCACTGTCAGTTGTTCGTTTGCCTCTCTCCATCTCCGTGCAGTTTCTTCAGCATTTTCATTGGTAGCATTTTCTTTTGCTT
TACCTTTTAACTTCTCTGAGTATGTGGCCTTTGATGTTTGTCCATCTTGGAATGTGAATTCAACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCGTTCGTCGTGTTAGAGTGGGTCGCTGGACTCTTGGTCGTCGTCAGTCAATTACCGGAGGATGGTCTCAAGGCAGCAATGGAGGTCGTGAGTGCTTCATGTGT
TGACCATCTTCCTTTGAAAACTTTAACCATCCTGCCTTCATTAGAACTTGCACTTTATGCTTTAGTGAAGTACAGTTTTCAGTTGAATGACCTACAACTCCTGCATGGTA
ATCACAGTGGACTTGCGGGTCGTACTACTTTGGATAAGGTGGCTGCAATGGTTCTACAGGTACTGGAGCTAGTAGATGACTTTGAAATAATTCTGATAACAGCTCGAGCC
GATGAGTTTATGGGTACTGTAGACGGATTGTATACCGCAGATCCTTGTTGGTACCTCCACTTGCGCTTCGAGATTACTGTCTGGACTTTATTTTTCCTTTTGATGAAGCT
TTTATTTTGTGGCTCTTTATCAATTAAAGGCACTGTCAGTTGTTCGTTTGCCTCTCTCCATCTCCGTGCAGTTTCTTCAGCATTTTCATTGGTAGCATTTTCTTTTGCTT
TACCTTTTAACTTCTCTGAGTATGTGGCCTTTGATGTTTGTCCATCTTGGAATGTGAATTCAACCTGA
Protein sequenceShow/hide protein sequence
MDSFVVLEWVAGLLVVVSQLPEDGLKAAMEVVSASCVDHLPLKTLTILPSLELALYALVKYSFQLNDLQLLHGNHSGLAGRTTLDKVAAMVLQVLELVDDFEIILITARA
DEFMGTVDGLYTADPCWYLHLRFEITVWTLFFLLMKLLFCGSLSIKGTVSCSFASLHLRAVSSAFSLVAFSFALPFNFSEYVAFDVCPSWNVNST