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Moc06g38540 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g38540
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionAuxin-responsive protein
Genome locationchr6:29898214..29898992
RNA-Seq ExpressionMoc06g38540
SyntenyMoc06g38540
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_002281696.1 PREDICTED: auxin-induced protein 22D [Vitis vinifera]6.1e-1141.73Show/hide
Query:  MKRRASFGNDLNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAG----------ASYGVIHQQRK---KKEMNKESGSGIYV
        M++   + N LN EAT LRLGLP   +  +Q  +  +SK+ ASP  A+E+RS S S +SDA             +  +   RK   ++   +  G+G+YV
Subjt:  MKRRASFGNDLNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAG----------ASYGVIHQQRK---KKEMNKESGSGIYV

Query:  KVSMDGAPYLRKIDL---KALPQLSTA
        KVSMDGAPYLRKIDL   K+ P+L  A
Subjt:  KVSMDGAPYLRKIDL---KALPQLSTA

XP_028784163.1 auxin-induced protein 22B-like [Prosopis alba]4.0e-1046.23Show/hide
Query:  MKRRASFGNDLNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAGA---SYGVIHQQRKKKEMNKESGSGIYVKVSMDGAPYL
        M+ + +F +DLN + T LRLGLP RE+Q+    S+  +KRP S  + D    GS+ +   A A    +  I   R K  + +   SGIYVKVSMDGAPYL
Subjt:  MKRRASFGNDLNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAGA---SYGVIHQQRKKKEMNKESGSGIYVKVSMDGAPYL

Query:  RKIDLK
        RKIDLK
Subjt:  RKIDLK

XP_028784970.1 auxin-induced protein 22B-like [Prosopis alba]4.0e-1046.23Show/hide
Query:  MKRRASFGNDLNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAGA---SYGVIHQQRKKKEMNKESGSGIYVKVSMDGAPYL
        M+ + +F +DLN + T LRLGLP RE+Q+    S+  +KRP S  + D    GS+ +   A A    +  I   R K  + +   SGIYVKVSMDGAPYL
Subjt:  MKRRASFGNDLNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAGA---SYGVIHQQRKKKEMNKESGSGIYVKVSMDGAPYL

Query:  RKIDLK
        RKIDLK
Subjt:  RKIDLK

XP_030945536.1 auxin-induced protein 22D-like [Quercus lobata]1.8e-1046.4Show/hide
Query:  MKRRASF-GNDLNFEATALRLGLP-RREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAG--------------------ASYGVIHQQRKKKEMN
        M+R  S+ GNDLN EAT LRLGLP   E ++Q   S + S + ASP  A+ES S S+S +SDA                      SY     Q+KK E +
Subjt:  MKRRASF-GNDLNFEATALRLGLP-RREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAG--------------------ASYGVIHQQRKKKEMN

Query:  KESGSGIYVKVSMDGAPYLRKIDLK
           G+G+YVKVSMDGAPYLRK+DLK
Subjt:  KESGSGIYVKVSMDGAPYLRKIDLK

XP_034691210.1 auxin-induced protein 22D-like [Vitis riparia]4.7e-1141.73Show/hide
Query:  MKRRASFGNDLNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAG----------ASYGVIHQQRK---KKEMNKESGSGIYV
        M++   + N LN EAT LRLGLP   +  +Q  +  +SK+ ASP  A+E+RS S S +SDA             +  +   RK   ++   +  G+G+YV
Subjt:  MKRRASFGNDLNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAG----------ASYGVIHQQRK---KKEMNKESGSGIYV

Query:  KVSMDGAPYLRKIDL---KALPQLSTA
        KVSMDGAPYLRKIDL   K+ P+L  A
Subjt:  KVSMDGAPYLRKIDL---KALPQLSTA

TrEMBL top hitse value%identityAlignment
A0A2N9F5Z0 Auxin-responsive protein2.5e-1044.44Show/hide
Query:  ASFGNDLNFEATALRLGLPRREQQ-RQQQQSEKQSKRPASPPAADESRSGSDSTLSDAG--------------ASYGVIHQQRKKKEMNKE---SGSGIY
        +++G DLN EAT LRLGLP  ++  +Q   S + S + ASP  A+ESRS S+S +SDA                 +  I   RK     K+    G+G+Y
Subjt:  ASFGNDLNFEATALRLGLPRREQQ-RQQQQSEKQSKRPASPPAADESRSGSDSTLSDAG--------------ASYGVIHQQRKKKEMNKE---SGSGIY

Query:  VKVSMDGAPYLRKIDLK
        VKVSMDGAPYLRK+DLK
Subjt:  VKVSMDGAPYLRKIDLK

A0A438KHQ3 Auxin-responsive protein3.0e-1141.73Show/hide
Query:  MKRRASFGNDLNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAG----------ASYGVIHQQRK---KKEMNKESGSGIYV
        M++   + N LN EAT LRLGLP   +  +Q  +  +SK+ ASP  A+E+RS S S +SDA             +  +   RK   ++   +  G+G+YV
Subjt:  MKRRASFGNDLNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAG----------ASYGVIHQQRK---KKEMNKESGSGIYV

Query:  KVSMDGAPYLRKIDL---KALPQLSTA
        KVSMDGAPYLRKIDL   K+ P+L  A
Subjt:  KVSMDGAPYLRKIDL---KALPQLSTA

A0A5N6QEV9 Auxin-responsive protein9.5e-1039.86Show/hide
Query:  MKRRASF-GNDLNFEATALRLGLPRRE--QQRQQQQSEKQSKRPASPPAADESRSGS--DSTLSDAG--------------ASYGVIHQQRKK----KEM
        M+R  ++ G+DLN EAT LRLGLP  +  +Q+Q   +  ++ + ASP  A+ESRS S  +S +SDAG                +  I   R+     K+ 
Subjt:  MKRRASF-GNDLNFEATALRLGLPRRE--QQRQQQQSEKQSKRPASPPAADESRSGS--DSTLSDAG--------------ASYGVIHQQRKK----KEM

Query:  NKESGSGIYVKVSMDGAPYLRKIDL---KALPQLSTAFGYLGK
        ++  G+G+YVKVSMDGAPYLRK+DL   K+ P+L  A  ++ K
Subjt:  NKESGSGIYVKVSMDGAPYLRKIDL---KALPQLSTAFGYLGK

A0A7N2N8V4 Auxin-responsive protein8.6e-1146.4Show/hide
Query:  MKRRASF-GNDLNFEATALRLGLP-RREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAG--------------------ASYGVIHQQRKKKEMN
        M+R  S+ GNDLN EAT LRLGLP   E ++Q   S + S + ASP  A+ES S S+S +SDA                      SY     Q+KK E +
Subjt:  MKRRASF-GNDLNFEATALRLGLP-RREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAG--------------------ASYGVIHQQRKKKEMN

Query:  KESGSGIYVKVSMDGAPYLRKIDLK
           G+G+YVKVSMDGAPYLRK+DLK
Subjt:  KESGSGIYVKVSMDGAPYLRKIDLK

D7SQK0 Auxin-responsive protein3.0e-1141.73Show/hide
Query:  MKRRASFGNDLNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAG----------ASYGVIHQQRK---KKEMNKESGSGIYV
        M++   + N LN EAT LRLGLP   +  +Q  +  +SK+ ASP  A+E+RS S S +SDA             +  +   RK   ++   +  G+G+YV
Subjt:  MKRRASFGNDLNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAG----------ASYGVIHQQRK---KKEMNKESGSGIYV

Query:  KVSMDGAPYLRKIDL---KALPQLSTA
        KVSMDGAPYLRKIDL   K+ P+L  A
Subjt:  KVSMDGAPYLRKIDL---KALPQLSTA

SwissProt top hitse value%identityAlignment
O24542 Auxin-induced protein 22D1.0e-0842.98Show/hide
Query:  SFGNDLNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADES--RSGSDSTLSD-----AGA---------SYGVIHQQRKKKEMNKESGSGIYVKV
        S+  +LN +AT LRLGLP  ++   ++++  +S + +SP A+DE    +GSD T  D     A A         SY   + Q+KK+E  +  G+G+YVKV
Subjt:  SFGNDLNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADES--RSGSDSTLSD-----AGA---------SYGVIHQQRKKKEMNKESGSGIYVKV

Query:  SMDGAPYLRKIDLK
        SM GAPYLRKIDLK
Subjt:  SMDGAPYLRKIDLK

O24543 Auxin-induced protein 22E4.7e-0634.75Show/hide
Query:  SFGNDLNFEATALRLGLPRREQQRQQQQ---SEKQSKRPASPPAADESR--------SGSDSTLSDAG-----------ASYGVIHQQRK----KKEMNK
        S+  +LN  AT LRLGLP  ++ ++++    S  +S    S P  +ESR        S   +T SD               +  I   RK    +K++ +
Subjt:  SFGNDLNFEATALRLGLPRREQQRQQQQ---SEKQSKRPASPPAADESR--------SGSDSTLSDAG-----------ASYGVIHQQRK----KKEMNK

Query:  ESGSGIYVKVSMDGAPYLRKIDL---KALPQLSTAFGYLGK
          G+G+Y+KVSM GAPYLRKIDL   K+ P+L  A   L K
Subjt:  ESGSGIYVKVSMDGAPYLRKIDL---KALPQLSTAFGYLGK

P13088 Auxin-induced protein AUX224.0e-0542Show/hide
Query:  LNFEATALRLGLPRREQQRQQQQSEKQSKRPASP----PAADESRSGSDSTLSDAGASYGV----IHQQRKKKEMNKESGSGIYVKVSMDGAPYLRKIDL
        L  E T LRLGLP  E Q      + + KR  S        + S SG      +   S  V    +   RKK  MN E  S +YVKVSMDGAP+LRKIDL
Subjt:  LNFEATALRLGLPRREQQRQQQQSEKQSKRPASP----PAADESRSGSDSTLSDAGASYGV----IHQQRKKKEMNKESGSGIYVKVSMDGAPYLRKIDL

P32294 Auxin-induced protein 22B1.2e-0634.75Show/hide
Query:  MKRRASFGNDLNFEATALRLGLPRREQQRQQQ-------QSEKQSKRPASPPAADESRSGSD----STLSDAGASYGVIH----QQRKKKEMNKESGSGI
        M+ R  F +DLN +AT LRLGLP  E++           ++ K+  R  S  +   S++        T+S       ++     +  +K  + +  G GI
Subjt:  MKRRASFGNDLNFEATALRLGLPRREQQRQQQ-------QSEKQSKRPASPPAADESRSGSD----STLSDAGASYGVIH----QQRKKKEMNKESGSGI

Query:  YVKVSMDGAPYLRKIDLK
        +VKVSMDGAPYLRK+DLK
Subjt:  YVKVSMDGAPYLRKIDLK

P33077 Auxin-responsive protein IAA48.9e-0540.19Show/hide
Query:  LNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAGA---SYGVIHQQRKKKEMNKES---GSGIYVKVSMDGAPYLRKIDL--
        +N +AT LRLGLP  E+     +S K+    A+    +   +G   T S   A    +  +   RK     K+S   G G YVKVSMDGAPYLRKIDL  
Subjt:  LNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAGA---SYGVIHQQRKKKEMNKES---GSGIYVKVSMDGAPYLRKIDL--

Query:  -KALPQL
         K  P+L
Subjt:  -KALPQL

Arabidopsis top hitse value%identityAlignment
AT1G04240.1 AUX/IAA transcriptional regulator family protein3.1e-0535.85Show/hide
Query:  LNFEATALRLGLPRR----EQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAGASYGVI----------HQQRKKKEMNKESGSGIYVKVSMDGAPY
        +N + T LRLGLP      E + +       +KR  S     E  S S  T +       ++          +  + KK  ++  G GIYVKVSMDGAPY
Subjt:  LNFEATALRLGLPRR----EQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAGASYGVI----------HQQRKKKEMNKESGSGIYVKVSMDGAPY

Query:  LRKIDL
        LRKIDL
Subjt:  LRKIDL

AT3G23030.1 indole-3-acetic acid inducible 21.8e-0540Show/hide
Query:  NDLNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAGASYGVIHQQRKKKEMNKESGSGIYVKVSMDGAPYLRKIDLK
        N+LN + T L LGLP R ++ +++Q E    +  +    +E+R   +ST        G    +  +K  N  S    YVKVSMDGAPYLRKIDLK
Subjt:  NDLNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAGASYGVIHQQRKKKEMNKESGSGIYVKVSMDGAPYLRKIDLK

AT4G14560.1 indole-3-acetic acid inducible1.1e-0538.24Show/hide
Query:  NDLNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAG-------ASYGVIHQQRKKKEMNKESGSGIYVKVSMDGAPYLRKID
        N LN + T LRLGLP  ++++Q + S  +S         +  R  +DST   A          +  +   RK    N  + +  YVKVSMDGAPYLRKID
Subjt:  NDLNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAG-------ASYGVIHQQRKKKEMNKESGSGIYVKVSMDGAPYLRKID

Query:  LK
        LK
Subjt:  LK

AT5G43700.1 AUX/IAA transcriptional regulator family protein6.3e-0640.19Show/hide
Query:  LNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAGA---SYGVIHQQRKKKEMNKES---GSGIYVKVSMDGAPYLRKIDL--
        +N +AT LRLGLP  E+     +S K+    A+    +   +G   T S   A    +  +   RK     K+S   G G YVKVSMDGAPYLRKIDL  
Subjt:  LNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAGA---SYGVIHQQRKKKEMNKES---GSGIYVKVSMDGAPYLRKIDL--

Query:  -KALPQL
         K  P+L
Subjt:  -KALPQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACGCCGAGCGAGTTTCGGAAACGATCTCAATTTCGAGGCAACGGCGCTGCGATTAGGATTGCCGCGGAGAGAACAACAACGGCAACAACAACAATCGGAGAAACA
GAGTAAGAGGCCAGCCTCGCCGCCTGCGGCTGACGAATCCAGATCCGGAAGCGACTCCACTCTCTCCGATGCTGGAGCGAGCTACGGAGTCATCCACCAGCAAAGGAAGA
AGAAGGAGATGAATAAGGAATCAGGGAGTGGAATTTATGTGAAAGTGAGCATGGATGGAGCTCCATACCTGAGGAAGATTGATCTCAAAGCTTTACCACAGCTATCAACA
GCTTTTGGATACCTTGGAAAACATGTTCAACTTCAAACATGGGAGATCTTCAGAGAGAGAAGGATACAGTGGGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACGCCGAGCGAGTTTCGGAAACGATCTCAATTTCGAGGCAACGGCGCTGCGATTAGGATTGCCGCGGAGAGAACAACAACGGCAACAACAACAATCGGAGAAACA
GAGTAAGAGGCCAGCCTCGCCGCCTGCGGCTGACGAATCCAGATCCGGAAGCGACTCCACTCTCTCCGATGCTGGAGCGAGCTACGGAGTCATCCACCAGCAAAGGAAGA
AGAAGGAGATGAATAAGGAATCAGGGAGTGGAATTTATGTGAAAGTGAGCATGGATGGAGCTCCATACCTGAGGAAGATTGATCTCAAAGCTTTACCACAGCTATCAACA
GCTTTTGGATACCTTGGAAAACATGTTCAACTTCAAACATGGGAGATCTTCAGAGAGAGAAGGATACAGTGGGTGTGA
Protein sequenceShow/hide protein sequence
MKRRASFGNDLNFEATALRLGLPRREQQRQQQQSEKQSKRPASPPAADESRSGSDSTLSDAGASYGVIHQQRKKKEMNKESGSGIYVKVSMDGAPYLRKIDLKALPQLST
AFGYLGKHVQLQTWEIFRERRIQWV