; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g39100 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g39100
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr6:30468675..30469354
RNA-Seq ExpressionMoc06g39100
SyntenyMoc06g39100
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158489.1 uncharacterized protein LOC111024968 [Momordica charantia]4.2e-0525.13Show/hide
Query:  EITMASIICWAAWNDKNELPNQ-------------------------------------------GVIKVNTEAVCNSHSQ-------------------
        E+ +  I CWA WND++ L N+                                           GV+K+NT+A  +                       
Subjt:  EITMASIICWAAWNDKNELPNQ-------------------------------------------GVIKVNTEAVCNSHSQ-------------------

Query:  --------QSKVLAIREGVRLVKHLQVSWIVVESNSPEAIWAINGTTVWQNEAKTWFLDIQQIAAHFESINSVYHQRISNALTHLLARNAV
                 +K+LAIREG+ L   L V  +VVE++S EA+  I   + W+ EA +W  DI+  A  F+ I   +  R SNA+ + L R  +
Subjt:  --------QSKVLAIREGVRLVKHLQVSWIVVESNSPEAIWAINGTTVWQNEAKTWFLDIQQIAAHFESINSVYHQRISNALTHLLARNAV
TrEMBL top hitse value%identityAlignment
A0A6J1DZK3 uncharacterized protein LOC1110249682.0e-0525.13Show/hide
Query:  EITMASIICWAAWNDKNELPNQ-------------------------------------------GVIKVNTEAVCNSHSQ-------------------
        E+ +  I CWA WND++ L N+                                           GV+K+NT+A  +                       
Subjt:  EITMASIICWAAWNDKNELPNQ-------------------------------------------GVIKVNTEAVCNSHSQ-------------------

Query:  --------QSKVLAIREGVRLVKHLQVSWIVVESNSPEAIWAINGTTVWQNEAKTWFLDIQQIAAHFESINSVYHQRISNALTHLLARNAV
                 +K+LAIREG+ L   L V  +VVE++S EA+  I   + W+ EA +W  DI+  A  F+ I   +  R SNA+ + L R  +
Subjt:  --------QSKVLAIREGVRLVKHLQVSWIVVESNSPEAIWAINGTTVWQNEAKTWFLDIQQIAAHFESINSVYHQRISNALTHLLARNAV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGTAATAGTTTCATTGATCGCTGGGGTATTTCATGACTTCTCTGACTCGATTGAGATCACGATGGCCAGTATAATTTGTTGGGCGGCCTGGAATGACAAAAATGA
GCTTCCAAATCAGGGAGTCATCAAAGTGAATACTGAAGCAGTTTGCAATTCTCATTCTCAGCAATCGAAAGTCCTTGCAATTCGAGAGGGTGTGCGACTGGTCAAACATT
TGCAAGTGTCGTGGATTGTTGTTGAATCAAACTCTCCGGAAGCAATTTGGGCCATCAATGGCACAACGGTTTGGCAAAATGAAGCGAAAACCTGGTTCCTGGACATCCAA
CAAATTGCTGCACATTTTGAATCGATAAATTCTGTGTATCACCAGAGAATTTCTAATGCTTTGACGCATTTGCTTGCCAGAAATGCAGTTCGTAGGTCTTCTTCTATTCT
CTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAGTAATAGTTTCATTGATCGCTGGGGTATTTCATGACTTCTCTGACTCGATTGAGATCACGATGGCCAGTATAATTTGTTGGGCGGCCTGGAATGACAAAAATGA
GCTTCCAAATCAGGGAGTCATCAAAGTGAATACTGAAGCAGTTTGCAATTCTCATTCTCAGCAATCGAAAGTCCTTGCAATTCGAGAGGGTGTGCGACTGGTCAAACATT
TGCAAGTGTCGTGGATTGTTGTTGAATCAAACTCTCCGGAAGCAATTTGGGCCATCAATGGCACAACGGTTTGGCAAAATGAAGCGAAAACCTGGTTCCTGGACATCCAA
CAAATTGCTGCACATTTTGAATCGATAAATTCTGTGTATCACCAGAGAATTTCTAATGCTTTGACGCATTTGCTTGCCAGAAATGCAGTTCGTAGGTCTTCTTCTATTCT
CTAG
Protein sequenceShow/hide protein sequence
MLVIVSLIAGVFHDFSDSIEITMASIICWAAWNDKNELPNQGVIKVNTEAVCNSHSQQSKVLAIREGVRLVKHLQVSWIVVESNSPEAIWAINGTTVWQNEAKTWFLDIQ
QIAAHFESINSVYHQRISNALTHLLARNAVRRSSSIL