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Moc06g40230 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g40230
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionlate embryogenesis abundant protein At5g17165-like
Genome locationchr6:31449838..31453932
RNA-Seq ExpressionMoc06g40230
SyntenyMoc06g40230
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup
IPR039291 - Late embryogenesis abundant protein At5g17165-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605657.1 ATP-dependent DNA helicase SRS2-like protein, partial [Cucurbita argyrosperma subsp. sororia]6.4e-2150.36Show/hide
Query:  MAAATSRFIAR--RLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTD
        MAAA++  IA   RLA F    RR       LS +L   R GHWS    AYEKN E +EVCPTVVPDH++      + +++YWAPHPQTGVFGPP   T 
Subjt:  MAAATSRFIAR--RLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTD

Query:  YSP-----SASASKEGSVLDLKAWFRHTALEDVDKDDPL
        ++P     S   +KEGSVL+LK WFRH  LED +K   L
Subjt:  YSP-----SASASKEGSVLDLKAWFRHTALEDVDKDDPL
XP_022159632.1 late embryogenesis abundant protein At5g17165-like [Momordica charantia]6.8e-71100Show/hide
Query:  MAAATSRFIARRLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYS
        MAAATSRFIARRLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYS
Subjt:  MAAATSRFIARRLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYS

Query:  PSASASKEGSVLDLKAWFRHTALEDVDKDDPLH
        PSASASKEGSVLDLKAWFRHTALEDVDKDDPLH
Subjt:  PSASASKEGSVLDLKAWFRHTALEDVDKDDPLH
XP_022957877.1 late embryogenesis abundant protein At5g17165-like [Cucurbita moschata]1.6e-1951.91Show/hide
Query:  MAAATSRFIAR--RLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTD
        MAAA++  IA   RLA      RR       LS +L   R GHWS    AYEKN E +EVCPTVVPDH+I      + +++YWAPHPQTGVFGPP   T 
Subjt:  MAAATSRFIAR--RLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTD

Query:  YSP-----SASASKEGSVLDLKAWFRHTALE
        ++P     SA  +KEGSVL+LK WFRH  LE
Subjt:  YSP-----SASASKEGSVLDLKAWFRHTALE
XP_022995249.1 late embryogenesis abundant protein At5g17165-like [Cucurbita maxima]1.4e-2051.09Show/hide
Query:  MAAATSRFIAR--RLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTD
        MAAA++  IA   RLA      RR       LS +L   R GHWS    AYEKN E +EVCPTVVPDH+I      + +++YWAPHPQTGVFGPP    +
Subjt:  MAAATSRFIAR--RLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTD

Query:  YSP---SASASKEGSVLDLKAWFRHTALEDVDKDDPL
          P   SA  +KEGSVL+LK WFRH  LED +K   L
Subjt:  YSP---SASASKEGSVLDLKAWFRHTALEDVDKDDPL
XP_023532525.1 late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo]1.1e-2051.08Show/hide
Query:  MAAATSRFIAR--RLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTD
        MAAA++  IA   RLA      RR       LS +L   R GHWS    AYEKN E +EVCPTVVPDH+I      + +++YWAPHPQTGVFGPP   T 
Subjt:  MAAATSRFIAR--RLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTD

Query:  YSP-----SASASKEGSVLDLKAWFRHTALEDVDKDDPL
        ++P     SA  +KEGSVL+LK WFRH  LED +K   L
Subjt:  YSP-----SASASKEGSVLDLKAWFRHTALEDVDKDDPL
TrEMBL top hitse value%identityAlignment
A0A2I4FBB8 late embryogenesis abundant protein At5g17165-like1.0e-1648.7Show/hide
Query:  SPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSPSASA-------SKEGSVLDLKAW
        S + SL +AL+LRR  H    A+ Y+KN ED    P+VVPDHVI       +++ YWAPHPQTGVFGPPA     + S S          EGSVL+ KAW
Subjt:  SPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSPSASA-------SKEGSVLDLKAW

Query:  FRHTALEDVDKDDPL
        FRHT +ED +K   L
Subjt:  FRHTALEDVDKDDPL
A0A5A7UIY1 Uncharacterized protein7.9e-1753Show/hide
Query:  RGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYS-----PSASASKEGSVLDLKAWFRHTALEDVDKDDPL
        R  HWS    AYEKN ED  + PT+VP+ VI H      + NYW PHPQTGVFGPP  H D S      SA  ++ GSVL+LKAWFRH  LED++K   L
Subjt:  RGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYS-----PSASASKEGSVLDLKAWFRHTALEDVDKDDPL
A0A6J1E0C6 late embryogenesis abundant protein At5g17165-like3.3e-71100Show/hide
Query:  MAAATSRFIARRLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYS
        MAAATSRFIARRLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYS
Subjt:  MAAATSRFIARRLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYS

Query:  PSASASKEGSVLDLKAWFRHTALEDVDKDDPLH
        PSASASKEGSVLDLKAWFRHTALEDVDKDDPLH
Subjt:  PSASASKEGSVLDLKAWFRHTALEDVDKDDPLH
A0A6J1H0D3 late embryogenesis abundant protein At5g17165-like7.7e-2051.91Show/hide
Query:  MAAATSRFIAR--RLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTD
        MAAA++  IA   RLA      RR       LS +L   R GHWS    AYEKN E +EVCPTVVPDH+I      + +++YWAPHPQTGVFGPP   T 
Subjt:  MAAATSRFIAR--RLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTD

Query:  YSP-----SASASKEGSVLDLKAWFRHTALE
        ++P     SA  +KEGSVL+LK WFRH  LE
Subjt:  YSP-----SASASKEGSVLDLKAWFRHTALE
A0A6J1K564 late embryogenesis abundant protein At5g17165-like6.9e-2151.09Show/hide
Query:  MAAATSRFIAR--RLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTD
        MAAA++  IA   RLA      RR       LS +L   R GHWS    AYEKN E +EVCPTVVPDH+I      + +++YWAPHPQTGVFGPP    +
Subjt:  MAAATSRFIAR--RLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTD

Query:  YSP---SASASKEGSVLDLKAWFRHTALEDVDKDDPL
          P   SA  +KEGSVL+LK WFRH  LED +K   L
Subjt:  YSP---SASASKEGSVLDLKAWFRHTALEDVDKDDPL
SwissProt top hitse value%identityAlignment
F4KFM8 Late embryogenesis abundant protein At5g171652.3e-1346.34Show/hide
Query:  TAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSPSASASKEGSVLDLKAWFRHTALEDVDK
        +AY+KN E +E+ P+ VPD +I        +  YW+PHPQTGVFGP +  T+        +E SV++ KAWFR T+LED+DK
Subjt:  TAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSPSASASKEGSVLDLKAWFRHTALEDVDK
Arabidopsis top hitse value%identityAlignment
AT3G03150.1 unknown protein4.8e-1443.81Show/hide
Query:  SPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSPSA-SASKEGSVLDLKAWFRHTAL
        S  ++ SA    RR GH    ++AY+KN ED E+  + VPD VI        +  YW+PHP+TGVFGP    T++S +A  A ++ +VL+  AWFR T+L
Subjt:  SPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSPSA-SASKEGSVLDLKAWFRHTAL

Query:  EDVDK
        ED DK
Subjt:  EDVDK
AT5G17165.1 unknown protein1.6e-1446.34Show/hide
Query:  TAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSPSASASKEGSVLDLKAWFRHTALEDVDK
        +AY+KN E +E+ P+ VPD +I        +  YW+PHPQTGVFGP +  T+        +E SV++ KAWFR T+LED+DK
Subjt:  TAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSPSASASKEGSVLDLKAWFRHTALEDVDK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCCACTTCCAGGTTTATTGCTCGACGACTCGCCGATTTCGGGAAGCAGCCACGGCGCCCTGTTTCGCCTAATTCTTCTCTCTCCGCCGCCCTCAGC
CTCAGGAGAGGAGGGCATTGGTCAGCAACAGCAACAGCATATGAGAAGAACACAGAGGATCAGGAAGTGTGCCCAACAGTGGTACCCGACCATGTGATATTCCAC
ACAGAAGCTGCAGCCCAAAACCAAAACTACTGGGCGCCGCACCCACAAACTGGAGTATTTGGGCCACCCGCCCACCACACCGACTACTCACCATCGGCTTCGGCT
TCCAAGGAGGGCTCGGTTCTGGACCTCAAGGCTTGGTTCCGCCACACCGCCCTCGAGGACGTCGACAAGGACGACCCACTACACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCGCCACTTCCAGGTTTATTGCTCGACGACTCGCCGATTTCGGGAAGCAGCCACGGCGCCCTGTTTCGCCTAATTCTTCTCTCTCCGCCGCCCTCAGC
CTCAGGAGAGGAGGGCATTGGTCAGCAACAGCAACAGCATATGAGAAGAACACAGAGGATCAGGAAGTGTGCCCAACAGTGGTACCCGACCATGTGATATTCCAC
ACAGAAGCTGCAGCCCAAAACCAAAACTACTGGGCGCCGCACCCACAAACTGGAGTATTTGGGCCACCCGCCCACCACACCGACTACTCACCATCGGCTTCGGCT
TCCAAGGAGGGCTCGGTTCTGGACCTCAAGGCTTGGTTCCGCCACACCGCCCTCGAGGACGTCGACAAGGACGACCCACTACACTAA
Protein sequenceShow/hide protein sequence
MAAATSRFIARRLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSPSASA
SKEGSVLDLKAWFRHTALEDVDKDDPLH