; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g40940 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g40940
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGlycine--tRNA ligase beta subunit
Genome locationchr6:32098768..32099520
RNA-Seq ExpressionMoc06g40940
SyntenyMoc06g40940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7810178.1 thaumatin-like protein 1 [Senna tora]2.0e-2343.35Show/hide
Query:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASRSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIE
        A+HNPIVG   A +    II RV +  RAPLL+E  ++  P   +   A + ++ +H ARV+  S  P+L RAL VD + APD   A    R E + ++E
Subjt:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASRSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIE

Query:  PVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLE
         + ERDVEE+ VV   Q V GQ V R AV L LEEA AV GLA A AG VE AV   P+   G A   V+ P +  V+LP+A    G P     VV D+E
Subjt:  PVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLE

Query:  SSC
          C
Subjt:  SSC

KAG6424917.1 hypothetical protein SASPL_115340 [Salvia splendens]1.1e-2141.74Show/hide
Query:  RAEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASRSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNI
        RA+ + I G  RA + AG +I RV   + AP LE+PR I  PA    G AA+    E GARVVAA    +  RAL  DV RA D P APV    E++ ++
Subjt:  RAEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASRSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNI

Query:  EPVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADL
        E +   DV  V VVE V+ V   GV R AVGL +E   AVAG A AAA  VE AV + P+ G   A    + P +  V+ P  AR  G P+  G +V D 
Subjt:  EPVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADL

Query:  ESSCMGVGRERENRKKKE
        E  CM +  E +N+++ +
Subjt:  ESSCMGVGRERENRKKKE

RRT35184.1 hypothetical protein B296_00051088, partial [Ensete ventricosum]3.9e-2747.96Show/hide
Query:  AGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASRSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIEPVDERDVEEVQVVEL
        A  I+  + V + A +LEEP V+   AAA  G AAV V  EHGA VVAA+R  Q   ALPVDV RAPDA AA  R   E++ ++E VD+ DVEEV+VV+L
Subjt:  AGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASRSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIEPVDERDVEEVQVVEL

Query:  VQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLESSCMGVGRERE
        V+   GQGV R+AV    + A AVA LA  AA PVE A  ++P+A +G + +HV+ P +  V+L SAA +  GP+    +V DLE   MG G ++E
Subjt:  VQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLESSCMGVGRERE

RWV93418.1 hypothetical protein GW17_00044119 [Ensete ventricosum]1.1e-2946.54Show/hide
Query:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASRSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIE
        ++ NP+VG+  A + A  I+  + V + A  LEEP V+   AAA  G AAV V  EHGA VVAA+R  Q   ALPVDV RAPDA AA  R   E++ ++E
Subjt:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASRSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIE

Query:  PVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLE
         VD+ DVEEV+VV+LV+   GQGV R++V    + A AVA LA  AA PVE A  ++P+AG+G +RVHV+ P +  V+L SAA +  GP+     V DLE
Subjt:  PVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLE

Query:  SSCMGVGRERENRKKKE
           M  G ++E   + E
Subjt:  SSCMGVGRERENRKKKE

RWW02825.1 hypothetical protein GW17_00034063 [Ensete ventricosum]3.2e-2141.01Show/hide
Query:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASRSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIE
        AE + +V +  AS+  G ++ RV V + A  LEE  V+  PAAA  G AAV V  EH A +VAA+  PQL  A P+DV RAPD  A P     E++ ++E
Subjt:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASRSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIE

Query:  PVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLE
         VDE DVEEV+VV+LV     + V  +AV L  ++A AV GLA +    VE A  +SP+A +G    H+  P    VKL +A      P+ E   V DLE
Subjt:  PVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLE

Query:  SSCMGVGRERENRKKKE
            G G E    ++ E
Subjt:  SSCMGVGRERENRKKKE

TrEMBL top hitse value%identityAlignment
A0A0P0W106 Os03g0663600 protein5.0e-2042.15Show/hide
Query:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVI-RWPAAAIRGGAAVAVAPEHGARVVAASRSPQLVRALPVDVSRAP----DAPAAPVRSRTEI
        AE + +VG+ RAS+ A  ++  V V +RA  LEE RV+ R      R GAAV V  EH ARVVA +  PQL RALP  V  AP     AP A V    E+
Subjt:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVI-RWPAAAIRGGAAVAVAPEHGARVVAASRSPQLVRALPVDVSRAP----DAPAAPVRSRTEI

Query:  NRNIEPVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVK-LPSAARYSGGPNSEGT
        + ++E VDE DVEEV+V ELVQ    Q V R  V    + A AVA LA   A  VE A  + P+A +  A  HV+ P +  V+ LP+A R+   P+ +  
Subjt:  NRNIEPVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVK-LPSAARYSGGPNSEGT

Query:  VVADLESSCMGVGRERENRKKKE
        +V D E   +  G E E R++ E
Subjt:  VVADLESSCMGVGRERENRKKKE

A0A426X6U9 Uncharacterized protein (Fragment)1.9e-2747.96Show/hide
Query:  AGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASRSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIEPVDERDVEEVQVVEL
        A  I+  + V + A +LEEP V+   AAA  G AAV V  EHGA VVAA+R  Q   ALPVDV RAPDA AA  R   E++ ++E VD+ DVEEV+VV+L
Subjt:  AGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASRSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIEPVDERDVEEVQVVEL

Query:  VQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLESSCMGVGRERE
        V+   GQGV R+AV    + A AVA LA  AA PVE A  ++P+A +G + +HV+ P +  V+L SAA +  GP+    +V DLE   MG G ++E
Subjt:  VQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLESSCMGVGRERE

A0A444D5Q9 Uncharacterized protein5.3e-3046.54Show/hide
Query:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASRSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIE
        ++ NP+VG+  A + A  I+  + V + A  LEEP V+   AAA  G AAV V  EHGA VVAA+R  Q   ALPVDV RAPDA AA  R   E++ ++E
Subjt:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASRSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIE

Query:  PVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLE
         VD+ DVEEV+VV+LV+   GQGV R++V    + A AVA LA  AA PVE A  ++P+AG+G +RVHV+ P +  V+L SAA +  GP+     V DLE
Subjt:  PVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLE

Query:  SSCMGVGRERENRKKKE
           M  G ++E   + E
Subjt:  SSCMGVGRERENRKKKE

A0A444DXF2 Uncharacterized protein1.5e-2141.01Show/hide
Query:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASRSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIE
        AE + +V +  AS+  G ++ RV V + A  LEE  V+  PAAA  G AAV V  EH A +VAA+  PQL  A P+DV RAPD  A P     E++ ++E
Subjt:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASRSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIE

Query:  PVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLE
         VDE DVEEV+VV+LV     + V  +AV L  ++A AV GLA +    VE A  +SP+A +G    H+  P    VKL +A      P+ E   V DLE
Subjt:  PVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLE

Query:  SSCMGVGRERENRKKKE
            G G E    ++ E
Subjt:  SSCMGVGRERENRKKKE

A0A6A4LNT7 CASP-like protein (Fragment)4.2e-1945.39Show/hide
Query:  QLVRALPVDVSRAPDAPAAPVRSRTEINRNIEPVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVH
        + +RALP+ +S A DA  A  RSR E + +IEP+ ER V++V+ VELVQ +F + V   A  L LE+ TAV GLA + A P+E+A  S P  GS CA   
Subjt:  QLVRALPVDVSRAPDAPAAPVRSRTEINRNIEPVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVH

Query:  VECPNVVSVKLPSAARYSGGPNSEGTVVADLESSCM--GVGRERENRKKKEK
        ++ P++  VK  +  R+ GGPNS GTVV D +S      V + RE R+K+EK
Subjt:  VECPNVVSVKLPSAARYSGGPNSEGTVVADLESSCM--GVGRERENRKKKEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAGAGAGTAAAGAAACTCATCGGATTCTTACTTATTCAGAGTAAAGTTTTTGGTTTTTACTTTTCATATATAATAAATATGGTTCTAAGGGCAGAACACAACCC
TATAGTTGGTTCCCCCAGGGCAAGTAAATGTGCTGGTTGCATCATCTTTAGGGTAACTGTATGCATCAGGGCACCGCTCCTTGAAGAACCTCGAGTAATCCGTTGGCCCG
CAGCTGCTATTCGGGGCGGTGCAGCAGTAGCGGTCGCCCCCGAACACGGGGCACGGGTTGTTGCAGCTTCCCGGAGCCCTCAGCTCGTTCGGGCACTGCCCGTTGATGTC
AGCCGTGCACCGGATGCCCCGGCTGCACCCGTTAGAAGTCGGACTGAAATCAATCGGAACATTGAACCCGTCGACGAGAGAGATGTCGAAGAAGTCCAAGTTGTTGAATT
GGTTCAAGGCGTATTCGGCCAGGGTGTTTGGCGGAGTGCCGTAGGCTTGACACTGGAGGAGGCCACCGCAGTCGCCGGTTTGGCATCTGCCGCGGCCGGACCCGTCGAAG
TTGCAGTTAGTTCGAGCCCAAATGCGGGCAGCGGCTGTGCCCGGGTTCACGTTGAATGTCCAAACGTCGTTTCGGTTAAGCTGCCGTCCGCCGCCCGGTACAGCGGCGGC
CCAAACAGTGAAGGGACAGTTGTTGCGGACTTGGAAAGTAGCTGCATGGGTGTGGGAAGAGAAAGAGAGAATAGAAAGAAAAAGGAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAACCAGAGAGTAAAGAAACTCATCGGATTCTTACTTATTCAGAGTAAAGTTTTTGGTTTTTACTTTTCATATATAATAAATATGGTTCTAAGGGCAGAACACAACCC
TATAGTTGGTTCCCCCAGGGCAAGTAAATGTGCTGGTTGCATCATCTTTAGGGTAACTGTATGCATCAGGGCACCGCTCCTTGAAGAACCTCGAGTAATCCGTTGGCCCG
CAGCTGCTATTCGGGGCGGTGCAGCAGTAGCGGTCGCCCCCGAACACGGGGCACGGGTTGTTGCAGCTTCCCGGAGCCCTCAGCTCGTTCGGGCACTGCCCGTTGATGTC
AGCCGTGCACCGGATGCCCCGGCTGCACCCGTTAGAAGTCGGACTGAAATCAATCGGAACATTGAACCCGTCGACGAGAGAGATGTCGAAGAAGTCCAAGTTGTTGAATT
GGTTCAAGGCGTATTCGGCCAGGGTGTTTGGCGGAGTGCCGTAGGCTTGACACTGGAGGAGGCCACCGCAGTCGCCGGTTTGGCATCTGCCGCGGCCGGACCCGTCGAAG
TTGCAGTTAGTTCGAGCCCAAATGCGGGCAGCGGCTGTGCCCGGGTTCACGTTGAATGTCCAAACGTCGTTTCGGTTAAGCTGCCGTCCGCCGCCCGGTACAGCGGCGGC
CCAAACAGTGAAGGGACAGTTGTTGCGGACTTGGAAAGTAGCTGCATGGGTGTGGGAAGAGAAAGAGAGAATAGAAAGAAAAAGGAGAAATAA
Protein sequenceShow/hide protein sequence
MNQRVKKLIGFLLIQSKVFGFYFSYIINMVLRAEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASRSPQLVRALPVDV
SRAPDAPAAPVRSRTEINRNIEPVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGG
PNSEGTVVADLESSCMGVGRERENRKKKEK