; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g41660 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g41660
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionZinc finger CCHC domain-containing protein
Genome locationchr6:32701308..32706937
RNA-Seq ExpressionMoc06g41660
SyntenyMoc06g41660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024019.1 hypothetical protein SDJN02_15048, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-5273.61Show/hide
Query:  VVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFHFHLVPFLLFIAFVFDLLQKPPRFYKEIEAKLQKQSKW
        VVP+N+GDLVL+FDYR KK++WEIVREGPSKHKIEIDWSNIIGIEAA EDHRQGILQLE                    LQKPPRFYKEIE+K  KQ KW
Subjt:  VVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFHFHLVPFLLFIAFVFDLLQKPPRFYKEIEAKLQKQSKW

Query:  IDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQ
         DESDFTDGRASLNRRYF+VFSPGVLG HYKR+MKNKH+LE  Q
Subjt:  IDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQ

XP_016900954.1 PREDICTED: uncharacterized protein LOC107991120 [Cucumis melo]3.7e-4251.31Show/hide
Query:  QMKEQLPQDQAAPLLLLSSPTSLMLLQP--------SSFALALGR-HVVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQ
        + + +    Q+    + S P+S    +P         +  L +G   VV  NE DLVL+FDYR KKISWE+VREGPSKHKIEIDWSNIIGI+AA EDHRQ
Subjt:  QMKEQLPQDQAAPLLLLSSPTSLMLLQP--------SSFALALGR-HVVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQ

Query:  GILQLEVNFHFHLVPFLLFIAFVFDLLQKPPRFYKEIEAKLQKQSKWIDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQ
        GILQLE                    LQ PPRFYKEIE +  K  KW +E DFT GR S++R++FSVF+PG+LG +YKR+MKNK +LE  Q
Subjt:  GILQLEVNFHFHLVPFLLFIAFVFDLLQKPPRFYKEIEAKLQKQSKWIDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQ

XP_022158816.1 uncharacterized protein LOC111025282 [Momordica charantia]3.0e-6076.79Show/hide
Query:  SSPTSLMLLQPSSFALAL---GRHVVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFHFHLVPFLLFIAFV
        SSP+ L  +  ++ AL L      VVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLE                 
Subjt:  SSPTSLMLLQPSSFALAL---GRHVVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFHFHLVPFLLFIAFV

Query:  FDLLQKPPRFYKEIEAKLQKQSKWIDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQ
           LQKPPRFYKEIEAKLQKQSKWIDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLE  Q
Subjt:  FDLLQKPPRFYKEIEAKLQKQSKWIDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQ

XP_022961562.1 uncharacterized protein LOC111462107 [Cucurbita moschata]1.8e-5273.61Show/hide
Query:  VVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFHFHLVPFLLFIAFVFDLLQKPPRFYKEIEAKLQKQSKW
        VVP+N+GDLVL+FDYR KK++WEIVREGPSKHKIEIDWSNIIGIEAA EDHRQGILQLE                    LQKPPRFYKEIE+K  KQ KW
Subjt:  VVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFHFHLVPFLLFIAFVFDLLQKPPRFYKEIEAKLQKQSKW

Query:  IDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQ
         DESDFTDGRASLNRRYF+VFSPGVLG HYKR+MKNKH+LE  Q
Subjt:  IDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQ

XP_022968779.1 uncharacterized protein LOC111467912 [Cucurbita maxima]1.8e-5273.61Show/hide
Query:  VVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFHFHLVPFLLFIAFVFDLLQKPPRFYKEIEAKLQKQSKW
        VVP+N+GDLVL+FDYR KK++WEIVREGPSKHKIEIDWSNIIGIEAA EDHRQGILQLE                    LQKPPRFYKEIE+K  KQ KW
Subjt:  VVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFHFHLVPFLLFIAFVFDLLQKPPRFYKEIEAKLQKQSKW

Query:  IDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQ
         DESDFTDGRASLNRRYF+VFSPGVLG HYKR+MKNKH+LE  Q
Subjt:  IDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQ

TrEMBL top hitse value%identityAlignment
A0A0A0M1F9 Uncharacterized protein6.9e-4258.06Show/hide
Query:  PSSFALALGRHVVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFHFHLVPFLLFIAFVFDLLQKPPRFYKE
        P+ F       VV  +E DLVL+FDYR KK+SWE+V EGPSKHKIEI+WSNIIGI+AA EDHRQGILQLE                    LQ PPRFYKE
Subjt:  PSSFALALGRHVVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFHFHLVPFLLFIAFVFDLLQKPPRFYKE

Query:  IEAKLQKQSKWIDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQ
        IE +  K  KW +E DFT GRAS+NR++FSVF+PG+LG +YKR+MKNK ++E  Q
Subjt:  IEAKLQKQSKWIDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQ

A0A1S4DY92 uncharacterized protein LOC1079911201.8e-4251.31Show/hide
Query:  QMKEQLPQDQAAPLLLLSSPTSLMLLQP--------SSFALALGR-HVVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQ
        + + +    Q+    + S P+S    +P         +  L +G   VV  NE DLVL+FDYR KKISWE+VREGPSKHKIEIDWSNIIGI+AA EDHRQ
Subjt:  QMKEQLPQDQAAPLLLLSSPTSLMLLQP--------SSFALALGR-HVVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQ

Query:  GILQLEVNFHFHLVPFLLFIAFVFDLLQKPPRFYKEIEAKLQKQSKWIDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQ
        GILQLE                    LQ PPRFYKEIE +  K  KW +E DFT GR S++R++FSVF+PG+LG +YKR+MKNK +LE  Q
Subjt:  GILQLEVNFHFHLVPFLLFIAFVFDLLQKPPRFYKEIEAKLQKQSKWIDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQ

A0A6J1E232 uncharacterized protein LOC1110252821.5e-6076.79Show/hide
Query:  SSPTSLMLLQPSSFALAL---GRHVVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFHFHLVPFLLFIAFV
        SSP+ L  +  ++ AL L      VVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLE                 
Subjt:  SSPTSLMLLQPSSFALAL---GRHVVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFHFHLVPFLLFIAFV

Query:  FDLLQKPPRFYKEIEAKLQKQSKWIDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQ
           LQKPPRFYKEIEAKLQKQSKWIDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLE  Q
Subjt:  FDLLQKPPRFYKEIEAKLQKQSKWIDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQ

A0A6J1HAI6 uncharacterized protein LOC1114621078.6e-5373.61Show/hide
Query:  VVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFHFHLVPFLLFIAFVFDLLQKPPRFYKEIEAKLQKQSKW
        VVP+N+GDLVL+FDYR KK++WEIVREGPSKHKIEIDWSNIIGIEAA EDHRQGILQLE                    LQKPPRFYKEIE+K  KQ KW
Subjt:  VVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFHFHLVPFLLFIAFVFDLLQKPPRFYKEIEAKLQKQSKW

Query:  IDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQ
         DESDFTDGRASLNRRYF+VFSPGVLG HYKR+MKNKH+LE  Q
Subjt:  IDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQ

A0A6J1I0N3 uncharacterized protein LOC1114679128.6e-5373.61Show/hide
Query:  VVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFHFHLVPFLLFIAFVFDLLQKPPRFYKEIEAKLQKQSKW
        VVP+N+GDLVL+FDYR KK++WEIVREGPSKHKIEIDWSNIIGIEAA EDHRQGILQLE                    LQKPPRFYKEIE+K  KQ KW
Subjt:  VVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFHFHLVPFLLFIAFVFDLLQKPPRFYKEIEAKLQKQSKW

Query:  IDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQ
         DESDFTDGRASLNRRYF+VFSPGVLG HYKR+MKNKH+LE  Q
Subjt:  IDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24100.1 unknown protein1.4e-1531.11Show/hide
Query:  EGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFHFHLVPFLLFIAFVFDLLQKPPRFYKEIEAKLQKQSKWIDESD
        EGDLV +  +   K+ WE++ +G  K KIEI WS+I+ ++A   +   G L +                    +L + P F++E   + +K + W   SD
Subjt:  EGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFHFHLVPFLLFIAFVFDLLQKPPRFYKEIEAKLQKQSKWIDESD

Query:  FTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVL
        FTDG+AS+NR++F    PG++  H++++++  H L
Subjt:  FTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVL

AT4G30780.1 unknown protein2.4e-1529.27Show/hide
Query:  SPTSLMLLQPSSFALALGR----HVVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFHFHLVPFLLFIAFV
        +P S+  L+ S+F  +L +        + EGDLV +  +   K+ WE++ +G  K KIEI WS+I+ ++A   +   G L L                  
Subjt:  SPTSLMLLQPSSFALALGR----HVVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFHFHLVPFLLFIAFV

Query:  FDLLQKPPRFYKEIEAKLQKQSKWIDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVL
          +L + P F++E   + +K + W   SDFTDG+AS+NR++F   + G++  H++++++  H L
Subjt:  FDLLQKPPRFYKEIEAKLQKQSKWIDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACAAGATCAAAATAGCTCATCAAATGAAAGAACAATTACCTCAGGACCAAGCAGCTCCTCTTCTCCTTCTGAGCTCCCCCACATCTCTAATGCTGCTCCAGCC
CTCTTCCTTCGCATTGGCTCTTGGCAGGCATGTGGTGCCCCAAAATGAAGGTGATTTGGTGTTGAGATTTGATTATAGGACCAAGAAGATATCGTGGGAGATTGTGAGGG
AGGGGCCTTCCAAGCACAAGATTGAAATTGATTGGTCTAACATCATTGGCATTGAAGCTGCTACTGAAGATCACAGACAAGGAATCCTCCAACTTGAGGTTAATTTTCAT
TTTCATCTAGTTCCATTTCTACTTTTCATTGCATTTGTTTTTGATCTACTGCAAAAACCACCAAGATTTTACAAGGAGATTGAAGCCAAACTACAGAAACAGTCCAAGTG
GATAGATGAATCAGATTTCACAGATGGCAGAGCTTCTTTAAATAGGAGATATTTTTCCGTGTTTTCTCCGGGAGTGCTTGGTGCACATTATAAGAGAATGATGAAAAATA
AGCATGTGTTAGAAGATAAGCAAGGAGAGGAAGAAGAAAGGGGGAGGGTAGTAGGCTGCGAACTGCTCGAGAAAAGGTGCGGCAACCGCGACAAGAGTAGCGGTAGCGAT
GTGGCCGTAGCTACGGTGGTGGCTACCGGAGTAGTGACCACGGTGACATTATTGCTTCTTCTTCAATTTTCCTGTCAGAAAAAGGTCAGTGTTTTCACTACTTTAAGTTC
AGATGATGAAACTGGGCATTTCAATGTTGCAAACACAATCTTCAGTGGATCATCTGTTCAGAAACAACACAAGAATTATTCGTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACAAGATCAAAATAGCTCATCAAATGAAAGAACAATTACCTCAGGACCAAGCAGCTCCTCTTCTCCTTCTGAGCTCCCCCACATCTCTAATGCTGCTCCAGCC
CTCTTCCTTCGCATTGGCTCTTGGCAGGCATGTGGTGCCCCAAAATGAAGGTGATTTGGTGTTGAGATTTGATTATAGGACCAAGAAGATATCGTGGGAGATTGTGAGGG
AGGGGCCTTCCAAGCACAAGATTGAAATTGATTGGTCTAACATCATTGGCATTGAAGCTGCTACTGAAGATCACAGACAAGGAATCCTCCAACTTGAGGTTAATTTTCAT
TTTCATCTAGTTCCATTTCTACTTTTCATTGCATTTGTTTTTGATCTACTGCAAAAACCACCAAGATTTTACAAGGAGATTGAAGCCAAACTACAGAAACAGTCCAAGTG
GATAGATGAATCAGATTTCACAGATGGCAGAGCTTCTTTAAATAGGAGATATTTTTCCGTGTTTTCTCCGGGAGTGCTTGGTGCACATTATAAGAGAATGATGAAAAATA
AGCATGTGTTAGAAGATAAGCAAGGAGAGGAAGAAGAAAGGGGGAGGGTAGTAGGCTGCGAACTGCTCGAGAAAAGGTGCGGCAACCGCGACAAGAGTAGCGGTAGCGAT
GTGGCCGTAGCTACGGTGGTGGCTACCGGAGTAGTGACCACGGTGACATTATTGCTTCTTCTTCAATTTTCCTGTCAGAAAAAGGTCAGTGTTTTCACTACTTTAAGTTC
AGATGATGAAACTGGGCATTTCAATGTTGCAAACACAATCTTCAGTGGATCATCTGTTCAGAAACAACACAAGAATTATTCGTTATGA
Protein sequenceShow/hide protein sequence
MENKIKIAHQMKEQLPQDQAAPLLLLSSPTSLMLLQPSSFALALGRHVVPQNEGDLVLRFDYRTKKISWEIVREGPSKHKIEIDWSNIIGIEAATEDHRQGILQLEVNFH
FHLVPFLLFIAFVFDLLQKPPRFYKEIEAKLQKQSKWIDESDFTDGRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEDKQGEEEERGRVVGCELLEKRCGNRDKSSGSD
VAVATVVATGVVTTVTLLLLLQFSCQKKVSVFTTLSSDDETGHFNVANTIFSGSSVQKQHKNYSL