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Moc06g42700 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g42700
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr6:33442409..33443843
RNA-Seq ExpressionMoc06g42700
SyntenyMoc06g42700
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145824.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia]1.5e-4677.12Show/hide
Query:  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLA
        +F     QIL +GSG+LA+YLQEIG+E+WARCYQV RRY+NMTTNS E VNALLRKARELP+TKIVEFIRD LQRWFH+RRT+WST+NTSHSDYA+ERLA
Subjt:  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLA

Query:  LRFEKSCRYIVKSIDWCM
        L+FEKS RY VK +DWCM
Subjt:  LRFEKSCRYIVKSIDWCM

XP_022151685.1 uncharacterized protein LOC111019601 [Momordica charantia]4.5e-4374.58Show/hide
Query:  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLA
        +F     QIL IGSGSLA+YLQEIGIE+WARCYQV RRY+NMTTNS   VNA L++ARELP+TKIVEFI + LQRWFH+RRT WST+NTSHSDYA+ERLA
Subjt:  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLA

Query:  LRFEKSCRYIVKSIDWCM
        ++FEKS RY VK IDWCM
Subjt:  LRFEKSCRYIVKSIDWCM

XP_022154925.1 uncharacterized protein LOC111022071 [Momordica charantia]1.8e-4475.42Show/hide
Query:  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLA
        +F     QIL IGSGSLA+YLQEIGIE+WARCYQV RRY+N TTNS E VNALLR+ARELP+TKIVEFIR+ LQRWFH+RR +WST+NTSHSDYA+ERLA
Subjt:  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLA

Query:  LRFEKSCRYIVKSIDWCM
        ++FEKS RY VK +DWCM
Subjt:  LRFEKSCRYIVKSIDWCM

XP_022156308.1 uncharacterized protein LOC111023235 [Momordica charantia]5.7e-4677.12Show/hide
Query:  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLA
        +F     QIL +GSGSLA+YLQEIGIE+WARCYQV RRY+NMTTNS E VNALLR+ARELP+TKIVEFI D LQRWFH+RRT+WST+NTSHSDYA+ERLA
Subjt:  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLA

Query:  LRFEKSCRYIVKSIDWCM
        L+FEKS RY VK +DWCM
Subjt:  LRFEKSCRYIVKSIDWCM

XP_022159086.1 uncharacterized protein LOC111025530 [Momordica charantia]3.1e-4474.58Show/hide
Query:  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLA
        +F     QIL +GSGSLA+YLQEIG+E+WARCYQV RRY+NMTTNS E VN LLR+A ELP+TKIVEFIRD LQRWFH RRT+WST+NTSHSDYA+E+LA
Subjt:  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLA

Query:  LRFEKSCRYIVKSIDWCM
        L+FEKS RY VK +DWCM
Subjt:  LRFEKSCRYIVKSIDWCM

TrEMBL top hitse value%identityAlignment
A0A6J1CWE6 protein FAR-RED ELONGATED HYPOCOTYL 3-like7.2e-4777.12Show/hide
Query:  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLA
        +F     QIL +GSG+LA+YLQEIG+E+WARCYQV RRY+NMTTNS E VNALLRKARELP+TKIVEFIRD LQRWFH+RRT+WST+NTSHSDYA+ERLA
Subjt:  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLA

Query:  LRFEKSCRYIVKSIDWCM
        L+FEKS RY VK +DWCM
Subjt:  LRFEKSCRYIVKSIDWCM

A0A6J1DBW0 uncharacterized protein LOC1110196012.2e-4374.58Show/hide
Query:  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLA
        +F     QIL IGSGSLA+YLQEIGIE+WARCYQV RRY+NMTTNS   VNA L++ARELP+TKIVEFI + LQRWFH+RRT WST+NTSHSDYA+ERLA
Subjt:  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLA

Query:  LRFEKSCRYIVKSIDWCM
        ++FEKS RY VK IDWCM
Subjt:  LRFEKSCRYIVKSIDWCM

A0A6J1DL08 uncharacterized protein LOC1110220718.9e-4575.42Show/hide
Query:  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLA
        +F     QIL IGSGSLA+YLQEIGIE+WARCYQV RRY+N TTNS E VNALLR+ARELP+TKIVEFIR+ LQRWFH+RR +WST+NTSHSDYA+ERLA
Subjt:  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLA

Query:  LRFEKSCRYIVKSIDWCM
        ++FEKS RY VK +DWCM
Subjt:  LRFEKSCRYIVKSIDWCM

A0A6J1DQ99 uncharacterized protein LOC1110232352.8e-4677.12Show/hide
Query:  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLA
        +F     QIL +GSGSLA+YLQEIGIE+WARCYQV RRY+NMTTNS E VNALLR+ARELP+TKIVEFI D LQRWFH+RRT+WST+NTSHSDYA+ERLA
Subjt:  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLA

Query:  LRFEKSCRYIVKSIDWCM
        L+FEKS RY VK +DWCM
Subjt:  LRFEKSCRYIVKSIDWCM

A0A6J1E2V3 uncharacterized protein LOC1110255301.5e-4474.58Show/hide
Query:  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLA
        +F     QIL +GSGSLA+YLQEIG+E+WARCYQV RRY+NMTTNS E VN LLR+A ELP+TKIVEFIRD LQRWFH RRT+WST+NTSHSDYA+E+LA
Subjt:  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLA

Query:  LRFEKSCRYIVKSIDWCM
        L+FEKS RY VK +DWCM
Subjt:  LRFEKSCRYIVKSIDWCM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATAACGAATGACGATGACCTCCGATTTGCATTACTCCAAGAACAGATACTACCGATTGGAAGTGGTTCACTGGCCGAATACTTACAAGAAATTGGGATAGAACA
GTGGGCACGGTGCTATCAAGTTTGTAGAAGGTATAAAAACATGACGACGAACAGCACTGAGCCAGTGAATGCCCTTCTTCGAAAGGCTAGAGAGTTACCGGTCACTAAGA
TTGTCGAGTTCATCCGCGACTGGCTCCAAAGATGGTTCCACAAAAGAAGAACTTACTGGTCCACCCGAAACACCTCTCATTCAGACTATGCAGATGAGCGACTTGCACTA
CGGTTTGAGAAGTCCTGTCGCTACATAGTCAAATCAATCGATTGGTGCATGCATGCTTCATGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCATAACGAATGACGATGACCTCCGATTTGCATTACTCCAAGAACAGATACTACCGATTGGAAGTGGTTCACTGGCCGAATACTTACAAGAAATTGGGATAGAACA
GTGGGCACGGTGCTATCAAGTTTGTAGAAGGTATAAAAACATGACGACGAACAGCACTGAGCCAGTGAATGCCCTTCTTCGAAAGGCTAGAGAGTTACCGGTCACTAAGA
TTGTCGAGTTCATCCGCGACTGGCTCCAAAGATGGTTCCACAAAAGAAGAACTTACTGGTCCACCCGAAACACCTCTCATTCAGACTATGCAGATGAGCGACTTGCACTA
CGGTTTGAGAAGTCCTGTCGCTACATAGTCAAATCAATCGATTGGTGCATGCATGCTTCATGTTGA
Protein sequenceShow/hide protein sequence
MFITNDDDLRFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLAL
RFEKSCRYIVKSIDWCMHASC