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Moc07g00140 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g00140
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr7:89607..95971
RNA-Seq ExpressionMoc07g00140
SyntenyMoc07g00140
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149985.1 uncharacterized protein LOC111018267 [Momordica charantia]6.9e-1852.58Show/hide
Query:  RAENANADALAKLTSSYPTELYRSIPVEILEAPSIQEPEAMIVEAAIPTWMDYIKAFLRGEELPEQVDLKKMRCKATWYVLRGDVLYKRGFSLLLLR
        R+EN+NADALAKL S+Y T++ RS+PVEIL+ PSI EP+ M V+ + P+WMD I  F++G    +  + KKM  KA  ++LR   LY+RGFSL LL+
Subjt:  RAENANADALAKLTSSYPTELYRSIPVEILEAPSIQEPEAMIVEAAIPTWMDYIKAFLRGEELPEQVDLKKMRCKATWYVLRGDVLYKRGFSLLLLR

XP_022150100.1 uncharacterized protein LOC111018362 [Momordica charantia]3.1e-1853.61Show/hide
Query:  RAENANADALAKLTSSYPTELYRSIPVEILEAPSIQEPEAMIVEAAIPTWMDYIKAFLRGEELPEQVDLKKMRCKATWYVLRGDVLYKRGFSLLLLR
        R+EN+NADALAKL S+Y T+L RS+PVEIL++PSI EP+ M V+   P+WMD I  F++G  L +  + KKM  +A  + LR   LY+RGFSL LL+
Subjt:  RAENANADALAKLTSSYPTELYRSIPVEILEAPSIQEPEAMIVEAAIPTWMDYIKAFLRGEELPEQVDLKKMRCKATWYVLRGDVLYKRGFSLLLLR

XP_022157799.1 uncharacterized protein LOC111024419 [Momordica charantia]6.9e-1845.86Show/hide
Query:  RAENANADALAKLTSSYPTELYRSIPVEILEAPSIQEPEAMIVEAAIPTWMDYIKAFLRGEELPEQVDLKKMRCKATWYVLRGDVLYKRGFSLLLLR---
        RAEN+NADALAKL S+Y T+L RS+PVEIL+ PSI EP+ M ++A  P+WMD I  F+RG    +  + KKM  KA  +++R   LY+R FSL LL+   
Subjt:  RAENANADALAKLTSSYPTELYRSIPVEILEAPSIQEPEAMIVEAAIPTWMDYIKAFLRGEELPEQVDLKKMRCKATWYVLRGDVLYKRGFSLLLLR---

Query:  ---GFVSLGAL---AAGEESGAGKITIPVVDSG
           G   L  +     G  SGA  ++  VV  G
Subjt:  ---GFVSLGAL---AAGEESGAGKITIPVVDSG

XP_022158092.1 uncharacterized protein LOC111024661 [Momordica charantia]9.1e-1843.61Show/hide
Query:  RAENANADALAKLTSSYPTELYRSIPVEILEAPSIQEPEAMIVEAAIPTWMDYIKAFLRGEELPEQVDLKKMRCKATWYVLRGDVLYKRGFSLLLLR---
        R+EN+NADALAKL S+Y T+L RS+PVEIL++PSI +P+ M ++   P+WMD I  F++G    +  + K+M  +A  ++LR  VLY+RGFSL LL+   
Subjt:  RAENANADALAKLTSSYPTELYRSIPVEILEAPSIQEPEAMIVEAAIPTWMDYIKAFLRGEELPEQVDLKKMRCKATWYVLRGDVLYKRGFSLLLLR---

Query:  ---GFVSLGAL---AAGEESGAGKITIPVVDSG
           G   L  +     G  SGA  ++  VV  G
Subjt:  ---GFVSLGAL---AAGEESGAGKITIPVVDSG

XP_022158651.1 uncharacterized protein LOC111025110 [Momordica charantia]9.0e-2654.36Show/hide
Query:  CKAFVAQFAAQQETKHPAQYLLTIRQKVRESLRDYVRRFLVVQIMVSCNEEFACLALASRVRNEQLKGSLAKNLEPTIKASIEQVKKFMQASELIQSRED
        C+AF   FAAQQ+T+HPAQYLLTIRQ+  ESLR+YVRRFL  QI VSCN+EF     ASRV  EQLK S  K  + TIKASIE  +KFMQA+ LIQS E+
Subjt:  CKAFVAQFAAQQETKHPAQYLLTIRQKVRESLRDYVRRFLVVQIMVSCNEEFACLALASRVRNEQLKGSLAKNLEPTIKASIEQVKKFMQASELIQSRED

Query:  PPRAIPVRERRGRDSSKRVVILSNSMWDKLLTEEEAEPAAREERGRRKR
        P RA    ERRGRD+S+R      S   +   +  + P  +++ GR +R
Subjt:  PPRAIPVRERRGRDSSKRVVILSNSMWDKLLTEEEAEPAAREERGRRKR

TrEMBL top hitse value%identityAlignment
A0A6J1D787 uncharacterized protein LOC1110182673.4e-1852.58Show/hide
Query:  RAENANADALAKLTSSYPTELYRSIPVEILEAPSIQEPEAMIVEAAIPTWMDYIKAFLRGEELPEQVDLKKMRCKATWYVLRGDVLYKRGFSLLLLR
        R+EN+NADALAKL S+Y T++ RS+PVEIL+ PSI EP+ M V+ + P+WMD I  F++G    +  + KKM  KA  ++LR   LY+RGFSL LL+
Subjt:  RAENANADALAKLTSSYPTELYRSIPVEILEAPSIQEPEAMIVEAAIPTWMDYIKAFLRGEELPEQVDLKKMRCKATWYVLRGDVLYKRGFSLLLLR

A0A6J1D7J6 Ribonuclease H1.5e-1853.61Show/hide
Query:  RAENANADALAKLTSSYPTELYRSIPVEILEAPSIQEPEAMIVEAAIPTWMDYIKAFLRGEELPEQVDLKKMRCKATWYVLRGDVLYKRGFSLLLLR
        R+EN+NADALAKL S+Y T+L RS+PVEIL++PSI EP+ M V+   P+WMD I  F++G  L +  + KKM  +A  + LR   LY+RGFSL LL+
Subjt:  RAENANADALAKLTSSYPTELYRSIPVEILEAPSIQEPEAMIVEAAIPTWMDYIKAFLRGEELPEQVDLKKMRCKATWYVLRGDVLYKRGFSLLLLR

A0A6J1DWA1 Ribonuclease H4.4e-1843.61Show/hide
Query:  RAENANADALAKLTSSYPTELYRSIPVEILEAPSIQEPEAMIVEAAIPTWMDYIKAFLRGEELPEQVDLKKMRCKATWYVLRGDVLYKRGFSLLLLR---
        R+EN+NADALAKL S+Y T+L RS+PVEIL++PSI +P+ M ++   P+WMD I  F++G    +  + K+M  +A  ++LR  VLY+RGFSL LL+   
Subjt:  RAENANADALAKLTSSYPTELYRSIPVEILEAPSIQEPEAMIVEAAIPTWMDYIKAFLRGEELPEQVDLKKMRCKATWYVLRGDVLYKRGFSLLLLR---

Query:  ---GFVSLGAL---AAGEESGAGKITIPVVDSG
           G   L  +     G  SGA  ++  VV  G
Subjt:  ---GFVSLGAL---AAGEESGAGKITIPVVDSG

A0A6J1DXK8 Ribonuclease H3.4e-1845.86Show/hide
Query:  RAENANADALAKLTSSYPTELYRSIPVEILEAPSIQEPEAMIVEAAIPTWMDYIKAFLRGEELPEQVDLKKMRCKATWYVLRGDVLYKRGFSLLLLR---
        RAEN+NADALAKL S+Y T+L RS+PVEIL+ PSI EP+ M ++A  P+WMD I  F+RG    +  + KKM  KA  +++R   LY+R FSL LL+   
Subjt:  RAENANADALAKLTSSYPTELYRSIPVEILEAPSIQEPEAMIVEAAIPTWMDYIKAFLRGEELPEQVDLKKMRCKATWYVLRGDVLYKRGFSLLLLR---

Query:  ---GFVSLGAL---AAGEESGAGKITIPVVDSG
           G   L  +     G  SGA  ++  VV  G
Subjt:  ---GFVSLGAL---AAGEESGAGKITIPVVDSG

A0A6J1E1K0 uncharacterized protein LOC1110251104.4e-2654.36Show/hide
Query:  CKAFVAQFAAQQETKHPAQYLLTIRQKVRESLRDYVRRFLVVQIMVSCNEEFACLALASRVRNEQLKGSLAKNLEPTIKASIEQVKKFMQASELIQSRED
        C+AF   FAAQQ+T+HPAQYLLTIRQ+  ESLR+YVRRFL  QI VSCN+EF     ASRV  EQLK S  K  + TIKASIE  +KFMQA+ LIQS E+
Subjt:  CKAFVAQFAAQQETKHPAQYLLTIRQKVRESLRDYVRRFLVVQIMVSCNEEFACLALASRVRNEQLKGSLAKNLEPTIKASIEQVKKFMQASELIQSRED

Query:  PPRAIPVRERRGRDSSKRVVILSNSMWDKLLTEEEAEPAAREERGRRKR
        P RA    ERRGRD+S+R      S   +   +  + P  +++ GR +R
Subjt:  PPRAIPVRERRGRDSSKRVVILSNSMWDKLLTEEEAEPAAREERGRRKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGAAGGTTCCCAAACATCAAGCAACCACCACTCAAAGGATCCAAAAGCTCGGTCGGGTGCTTCCAAACCACCGGCAGGTCGGAAGCCGAAGACCTGGGCC
GAGTCCCAAAGGTCGCGGCCCTACCTGAGGCACTGCAAAACAACTGGAGTGCCGCTCCTCGAGCTCCCTAAGCCCGAGGTCCAGCGCGACCCCCAAATGGGAAAG
ACAAAGCTATCAGGGTTTGCAAGGAAATGGTACCAACAGTTCTTGCCTCACTCCATTTCCTCTTGGAAGCAGCTTTGCAAGGCCTTCGTGGCTCAGTTCGCTGCT
CAGCAAGAGACTAAACACCCAGCCCAATATTTGCTAACGATAAGGCAAAAGGTAAGGGAAAGCCTGAGGGACTACGTGAGAAGGTTCCTCGTCGTGCAGATCATG
GTGTCCTGCAACGAAGAGTTCGCCTGCTTGGCGTTGGCTTCAAGAGTCCGGAATGAGCAGTTGAAGGGGTCTCTTGCTAAAAATCTCGAGCCCACTATCAAAGCC
AGCATAGAACAAGTCAAGAAGTTCATGCAAGCGAGCGAGCTCATCCAATCAAGGGAGGACCCTCCCAGAGCCATCCCCGTGAGGGAAAGAAGAGGTCGGGATAGC
TCTAAAAGGGTTGTCATACTGTCCAATAGCATGTGGGATAAGCTCCTAACGGAGGAGGAAGCGGAGCCGGCGGCTCGAGAGGAGAGAGGACGGAGAAAGAGAGGT
CGCGATCTCCCTCAAAGTGCACAAATCGACCTGTCGCTGGGAGTAAGGTCAACTAAGGCTAAGCCCCACCCCGCCGGTCGATTTTGCAGGAGAGCCGAGAATGCT
AACGCGGATGCCTTGGCAAAACTGACGTCTTCTTACCCGACCGAGCTATATAGGTCGATCCCAGTCGAGATTTTGGAAGCCCCCTCCATTCAAGAGCCAGAGGCA
ATGATTGTCGAAGCAGCGATACCGACTTGGATGGATTACATAAAAGCCTTCCTACGAGGAGAGGAACTCCCAGAACAAGTCGATCTCAAGAAAATGCGATGCAAG
GCGACATGGTACGTTCTACGAGGTGATGTGTTGTACAAGAGGGGATTTTCCCTTCTGCTGCTGAGGGGATTCGTGAGTTTGGGTGCTCTTGCCGCGGGAGAGGAA
AGCGGTGCAGGCAAAATAACCATTCCGGTAGTTGATAGTGGAGCAAAGGCTGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGACGGAAGGTTCCCAAACATCAAGCAACCACCACTCAAAGGATCCAAAAGCTCGGTCGGGTGCTTCCAAACCACCGGCAGGTCGGAAGCCGAAGACCTGGGCC
GAGTCCCAAAGGTCGCGGCCCTACCTGAGGCACTGCAAAACAACTGGAGTGCCGCTCCTCGAGCTCCCTAAGCCCGAGGTCCAGCGCGACCCCCAAATGGGAAAG
ACAAAGCTATCAGGGTTTGCAAGGAAATGGTACCAACAGTTCTTGCCTCACTCCATTTCCTCTTGGAAGCAGCTTTGCAAGGCCTTCGTGGCTCAGTTCGCTGCT
CAGCAAGAGACTAAACACCCAGCCCAATATTTGCTAACGATAAGGCAAAAGGTAAGGGAAAGCCTGAGGGACTACGTGAGAAGGTTCCTCGTCGTGCAGATCATG
GTGTCCTGCAACGAAGAGTTCGCCTGCTTGGCGTTGGCTTCAAGAGTCCGGAATGAGCAGTTGAAGGGGTCTCTTGCTAAAAATCTCGAGCCCACTATCAAAGCC
AGCATAGAACAAGTCAAGAAGTTCATGCAAGCGAGCGAGCTCATCCAATCAAGGGAGGACCCTCCCAGAGCCATCCCCGTGAGGGAAAGAAGAGGTCGGGATAGC
TCTAAAAGGGTTGTCATACTGTCCAATAGCATGTGGGATAAGCTCCTAACGGAGGAGGAAGCGGAGCCGGCGGCTCGAGAGGAGAGAGGACGGAGAAAGAGAGGT
CGCGATCTCCCTCAAAGTGCACAAATCGACCTGTCGCTGGGAGTAAGGTCAACTAAGGCTAAGCCCCACCCCGCCGGTCGATTTTGCAGGAGAGCCGAGAATGCT
AACGCGGATGCCTTGGCAAAACTGACGTCTTCTTACCCGACCGAGCTATATAGGTCGATCCCAGTCGAGATTTTGGAAGCCCCCTCCATTCAAGAGCCAGAGGCA
ATGATTGTCGAAGCAGCGATACCGACTTGGATGGATTACATAAAAGCCTTCCTACGAGGAGAGGAACTCCCAGAACAAGTCGATCTCAAGAAAATGCGATGCAAG
GCGACATGGTACGTTCTACGAGGTGATGTGTTGTACAAGAGGGGATTTTCCCTTCTGCTGCTGAGGGGATTCGTGAGTTTGGGTGCTCTTGCCGCGGGAGAGGAA
AGCGGTGCAGGCAAAATAACCATTCCGGTAGTTGATAGTGGAGCAAAGGCTGGATAA
Protein sequenceShow/hide protein sequence
MTEGSQTSSNHHSKDPKARSGASKPPAGRKPKTWAESQRSRPYLRHCKTTGVPLLELPKPEVQRDPQMGKTKLSGFARKWYQQFLPHSISSWKQLCKAFVAQFAA
QQETKHPAQYLLTIRQKVRESLRDYVRRFLVVQIMVSCNEEFACLALASRVRNEQLKGSLAKNLEPTIKASIEQVKKFMQASELIQSREDPPRAIPVRERRGRDS
SKRVVILSNSMWDKLLTEEEAEPAAREERGRRKRGRDLPQSAQIDLSLGVRSTKAKPHPAGRFCRRAENANADALAKLTSSYPTELYRSIPVEILEAPSIQEPEA
MIVEAAIPTWMDYIKAFLRGEELPEQVDLKKMRCKATWYVLRGDVLYKRGFSLLLLRGFVSLGALAAGEESGAGKITIPVVDSGAKAG