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Moc07g00290 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g00290
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibosome biogenesis NEP1-like protein
Genome locationchr7:142721..143415
RNA-Seq ExpressionMoc07g00290
SyntenyMoc07g00290
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039866.1 putative Ribosome biogenesis protein NEP1-like [Cucumis melo var. makuwa]5.2e-5178.81Show/hide
Query:  MLVGIPSRIEGKRCFASSTTA--------SSSSSSK-----SEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVI
        MLVG  +RI+G R FASSTTA        SSSSSSK     SEYMKGEYAPIYIVMGMV V V+I THTAKQQLLHSP+V  SKKKRESIPEV+DPDTVI
Subjt:  MLVGIPSRIEGKRCFASSTTA--------SSSSSSK-----SEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVI

Query:  TSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT
        TSADKF+NKSFLRKVAHIQD  KTL DP HPDPFTRPRNAETLKTAGVDPT
Subjt:  TSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT

XP_008459927.1 PREDICTED: uncharacterized protein LOC103498899 [Cucumis melo]4.3e-5378.71Show/hide
Query:  KLWKSMLVGIPSRIEGKRCFASSTTA-------SSSSSSK-----SEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDP
        K+WKSMLVG  +RI+G R FASSTTA       SSSSSSK     SEYMKGEYAPIYIVMGMV V V+I THTAKQQLLHSP+V  SKKKRESIPEV+DP
Subjt:  KLWKSMLVGIPSRIEGKRCFASSTTA-------SSSSSSK-----SEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDP

Query:  DTVITSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT
        DTVITSADKF+NKSFLRKVAHIQD  KTL DP H DPFTRPRNAETLKTAGVDPT
Subjt:  DTVITSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT

XP_022148953.1 uncharacterized protein LOC111017496 isoform X1 [Momordica charantia]4.2e-77100Show/hide
Query:  MAFRRTKLWKSMLVGIPSRIEGKRCFASSTTASSSSSSKSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITS
        MAFRRTKLWKSMLVGIPSRIEGKRCFASSTTASSSSSSKSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITS
Subjt:  MAFRRTKLWKSMLVGIPSRIEGKRCFASSTTASSSSSSKSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITS

Query:  ADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR
        ADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR
Subjt:  ADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR

XP_022148954.1 uncharacterized protein LOC111017496 isoform X2 [Momordica charantia]4.0e-7599.34Show/hide
Query:  MAFRRTKLWKSMLVGIPSRIEGKRCFASSTTASSSSSSKSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITS
        MAFRRT LWKSMLVGIPSRIEGKRCFASSTTASSSSSSKSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITS
Subjt:  MAFRRTKLWKSMLVGIPSRIEGKRCFASSTTASSSSSSKSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITS

Query:  ADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR
        ADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR
Subjt:  ADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR

XP_038906484.1 uncharacterized protein LOC120092464 [Benincasa hispida]1.2e-5275.16Show/hide
Query:  KLWKSMLVGIPSRIEGKRCFASSTTA-------------SSSSSSK-----SEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESI
        K+WK+MLVG  SRI+GKR  ASSTTA             SSSSSSK     SEYMKGEYAPIYIV+GMV VAV+IGTHTAKQQLLHSPVV  SKKKRESI
Subjt:  KLWKSMLVGIPSRIEGKRCFASSTTA-------------SSSSSSK-----SEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESI

Query:  PEVDDPDTVITSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT
        PEVDDPDT+I SA+KF+NKSFLRKVAHIQ+  KTL DP HP+PFTRPRNAETLKTAGVDPT
Subjt:  PEVDDPDTVITSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT

TrEMBL top hitse value%identityAlignment
A0A0A0KC39 Uncharacterized protein3.3e-5174.05Show/hide
Query:  KLWKSMLVGIPSRIEGKRCFASSTT---------ASSSSSSK------SEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEV
        K+WKSMLV   +RI+G R F+SSTT         ASS SSS       SEYMKGEYAPIYIVMGMV V V+I THTAKQQLLHSP+V  SKKKRESIPEV
Subjt:  KLWKSMLVGIPSRIEGKRCFASSTT---------ASSSSSSK------SEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEV

Query:  DDPDTVITSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT
        +DPDTVITSADKF+NKSFLRKVAHIQ   KTL DP HPDPFTRPRNAETLKTAG+DPT
Subjt:  DDPDTVITSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT

A0A1S3CBE5 uncharacterized protein LOC1034988992.1e-5378.71Show/hide
Query:  KLWKSMLVGIPSRIEGKRCFASSTTA-------SSSSSSK-----SEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDP
        K+WKSMLVG  +RI+G R FASSTTA       SSSSSSK     SEYMKGEYAPIYIVMGMV V V+I THTAKQQLLHSP+V  SKKKRESIPEV+DP
Subjt:  KLWKSMLVGIPSRIEGKRCFASSTTA-------SSSSSSK-----SEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDP

Query:  DTVITSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT
        DTVITSADKF+NKSFLRKVAHIQD  KTL DP H DPFTRPRNAETLKTAGVDPT
Subjt:  DTVITSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT

A0A5D3DLZ1 Putative Ribosome biogenesis protein NEP1-like2.5e-5178.81Show/hide
Query:  MLVGIPSRIEGKRCFASSTTA--------SSSSSSK-----SEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVI
        MLVG  +RI+G R FASSTTA        SSSSSSK     SEYMKGEYAPIYIVMGMV V V+I THTAKQQLLHSP+V  SKKKRESIPEV+DPDTVI
Subjt:  MLVGIPSRIEGKRCFASSTTA--------SSSSSSK-----SEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVI

Query:  TSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT
        TSADKF+NKSFLRKVAHIQD  KTL DP HPDPFTRPRNAETLKTAGVDPT
Subjt:  TSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT

A0A6J1D5I0 uncharacterized protein LOC111017496 isoform X12.1e-77100Show/hide
Query:  MAFRRTKLWKSMLVGIPSRIEGKRCFASSTTASSSSSSKSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITS
        MAFRRTKLWKSMLVGIPSRIEGKRCFASSTTASSSSSSKSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITS
Subjt:  MAFRRTKLWKSMLVGIPSRIEGKRCFASSTTASSSSSSKSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITS

Query:  ADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR
        ADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR
Subjt:  ADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR

A0A6J1D5L1 uncharacterized protein LOC111017496 isoform X21.9e-7599.34Show/hide
Query:  MAFRRTKLWKSMLVGIPSRIEGKRCFASSTTASSSSSSKSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITS
        MAFRRT LWKSMLVGIPSRIEGKRCFASSTTASSSSSSKSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITS
Subjt:  MAFRRTKLWKSMLVGIPSRIEGKRCFASSTTASSSSSSKSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITS

Query:  ADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR
        ADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR
Subjt:  ADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G63060.1 unknown protein3.9e-2844.97Show/hide
Query:  MAFRRTKLWKSMLVGIPSRIEGKRCFASSTTASSSSSSKSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITS
        MAFR T    S L  + ++  G R FA++    +  +     + GE+AP+ I+ G V +AV +  H+ KQQL+H+P +   K +R ++ EVDDP+  ++S
Subjt:  MAFRRTKLWKSMLVGIPSRIEGKRCFASSTTASSSSSSKSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITS

Query:  ADKFVNKSFLRKVAHIQDHNKT-LRDPQHPDPFTRPRNAETLKTAGVDP
        ADKF+NKS+LRKV  IQD +K  L DP  P+PFT PRNAETL + GV P
Subjt:  ADKFVNKSFLRKVAHIQDHNKT-LRDPQHPDPFTRPRNAETLKTAGVDP

AT5G07330.1 unknown protein1.0e-2036.55Show/hide
Query:  IEGKRCFASSTTASSS---SSSKSEY-----------MKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFV
        ++  R +  +TT   S   S++ +EY            KG++ P+Y+ +G++ ++VT G +TA   L  +P V ++KK RE++PE++DPD V+  AD+F 
Subjt:  IEGKRCFASSTTASSS---SSSKSEY-----------MKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFV

Query:  NKSFLRKVAHIQDHNK--TLRDPQHPDPFTRPRNAETLKTAGVDP
        N+S+ RK+AH+Q+ +K   + DP   D F     A TLK  GVDP
Subjt:  NKSFLRKVAHIQDHNK--TLRDPQHPDPFTRPRNAETLKTAGVDP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTCAGACGGACTAAGCTATGGAAATCAATGCTGGTGGGAATTCCAAGCAGGATAGAAGGGAAGCGCTGTTTTGCGTCGTCTACCACCGCTTCTTCTTCT
TCAAGTTCTAAGAGCGAGTACATGAAGGGGGAGTACGCCCCAATCTACATTGTTATGGGGATGGTGGTGGTTGCCGTGACGATCGGAACCCACACCGCGAAGCAG
CAGCTGTTGCATTCGCCAGTGGTGATGCTGAGCAAGAAGAAGAGGGAGAGCATTCCGGAGGTGGATGACCCCGACACCGTCATCACATCCGCCGACAAGTTTGTC
AACAAATCATTTCTTAGGAAGGTGGCTCACATTCAGGACCACAACAAAACGCTGCGCGATCCCCAACACCCCGATCCTTTTACACGGCCTCGAAATGCTGAAACT
CTCAAAACGGCTGGAGTGGATCCTACCCACTCCCGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTCAGACGGACTAAGCTATGGAAATCAATGCTGGTGGGAATTCCAAGCAGGATAGAAGGGAAGCGCTGTTTTGCGTCGTCTACCACCGCTTCTTCTTCT
TCAAGTTCTAAGAGCGAGTACATGAAGGGGGAGTACGCCCCAATCTACATTGTTATGGGGATGGTGGTGGTTGCCGTGACGATCGGAACCCACACCGCGAAGCAG
CAGCTGTTGCATTCGCCAGTGGTGATGCTGAGCAAGAAGAAGAGGGAGAGCATTCCGGAGGTGGATGACCCCGACACCGTCATCACATCCGCCGACAAGTTTGTC
AACAAATCATTTCTTAGGAAGGTGGCTCACATTCAGGACCACAACAAAACGCTGCGCGATCCCCAACACCCCGATCCTTTTACACGGCCTCGAAATGCTGAAACT
CTCAAAACGGCTGGAGTGGATCCTACCCACTCCCGCTAG
Protein sequenceShow/hide protein sequence
MAFRRTKLWKSMLVGIPSRIEGKRCFASSTTASSSSSSKSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFV
NKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR