CuGenDBv2

Gene ID	Moc07g00430
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Coiled-coil domain-containing protein SCD2
Genome location	chr7:225361..226784
RNA-Seq Expression	Moc07g00430
Synteny	Moc07g00430
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0000911 - cytokinesis by cell plate formation (biological process) GO:0097196 - Shu complex (cellular component) GO:0003697 - single-stranded DNA binding (molecular function)
InterPro domains	IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008459907.1 PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo]

5.0e-118

88.6

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Query:  MERFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHS
        ME+FFSV+QIH+ C+SSHSI L+SGPPSCGKTSLLFQFAFNLGLEGNVTFIC RRKLENKPPYLSQGVDP SETF+RIQMKYLEDD+GIKKYFSAFHLHS
Subjt:  MERFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHS

Query:  TLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWF-MRSINNCG
        TLP AVVIDDFGDFF +RRCQ KYANPRGRD+AMVRTLALCHNAVS+AN+ RPC+LVLSDTHHGESPRLIFIYKRWVPTIFTIRGDG+GWF +RSINNCG
Subjt:  TLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWF-MRSINNCG

Query:  NDCCLRTRGAKYSIALQFLSLDEISEDS
        NDCCLRT+ AKYSIALQFLSL+EISEDS
Subjt:  NDCCLRTRGAKYSIALQFLSLDEISEDS

XP_011656789.1 uncharacterized protein LOC101205665 [Cucumis sativus]

2.2e-118

89.47

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Query:  MERFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHS
        ME+FFSV+QIH+HC+SSHSI L+SGPPSCGKTSLLFQFAFNLGLEGNVTFIC RRKLENKPPYLSQGVDP SETFQRIQMKYLEDD+GIKKYFSAFHLHS
Subjt:  MERFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHS

Query:  TLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWF-MRSINNCG
        TLP AVVIDDFGDFF +RRCQEKYANPRGRDLAMVRTLALC NAVS+AN+ RPC+LVLSDTHHGESPRLIFIYKRWVPTIFTIRGDG+GWF +RSINNCG
Subjt:  TLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWF-MRSINNCG

Query:  NDCCLRTRGAKYSIALQFLSLDEISEDS
         DCCLRT+ AKYSIALQFLSL+EISEDS
Subjt:  NDCCLRTRGAKYSIALQFLSLDEISEDS

XP_022148906.1 uncharacterized protein LOC111017459 [Momordica charantia]

1.6e-132

100

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Query:  MERFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHS
        MERFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHS
Subjt:  MERFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHS

Query:  TLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFMRSINNCGN
        TLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFMRSINNCGN
Subjt:  TLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFMRSINNCGN

Query:  DCCLRTRGAKYSIALQFLSLDEISEDSG
        DCCLRTRGAKYSIALQFLSLDEISEDSG
Subjt:  DCCLRTRGAKYSIALQFLSLDEISEDSG

XP_022959968.1 uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata]

3.8e-118

90.22

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Query:  RFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHSTL
        RFFSVRQI + CDSSHSIML+SGPPSCGKTSLLFQFAFNLGLEGNVTFIC RRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGI KYFSAFHLH TL
Subjt:  RFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHSTL

Query:  PAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWF-MRSINNCGND
        P AVVIDDFGDFF +RRCQEKYANPRGRDLAMVRTLALCHNA+S+AN+ RPC+LVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWF +RSINNCGN+
Subjt:  PAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWF-MRSINNCGND

Query:  CCLRTRGAKYSIALQFLSLDEISED
        CCLRT+ AKYSIALQFLSL+E+SED
Subjt:  CCLRTRGAKYSIALQFLSLDEISED

XP_038906786.1 uncharacterized protein LOC120092706 isoform X1 [Benincasa hispida]

7.7e-119

89.91

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Query:  MERFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHS
        ME+FFSVRQIH+HCDSSHSIML+SGPPSCGKTSLLFQFAFNLGL+GNVTFIC RRKLENKPPYLSQGVDP SETFQRIQMKYLEDDEGIKKYFSAFHLH 
Subjt:  MERFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHS

Query:  TLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWF-MRSINNCG
        TLP AVVIDDFGDFF +RRCQ+KYANPRGRDLAMVRTLALCHNAVS+AN SRPC+LVLSD +HGESPRLIFIYKRWVPTIFTI GDG GWF +RSINNCG
Subjt:  TLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWF-MRSINNCG

Query:  NDCCLRTRGAKYSIALQFLSLDEISEDS
        NDCCLR R AKYSIALQFLSL+EISEDS
Subjt:  NDCCLRTRGAKYSIALQFLSLDEISEDS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K9H1 Uncharacterized protein

1.1e-118

89.47

Show/hide

Query:  MERFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHS
        ME+FFSV+QIH+HC+SSHSI L+SGPPSCGKTSLLFQFAFNLGLEGNVTFIC RRKLENKPPYLSQGVDP SETFQRIQMKYLEDD+GIKKYFSAFHLHS
Subjt:  MERFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHS

Query:  TLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWF-MRSINNCG
        TLP AVVIDDFGDFF +RRCQEKYANPRGRDLAMVRTLALC NAVS+AN+ RPC+LVLSDTHHGESPRLIFIYKRWVPTIFTIRGDG+GWF +RSINNCG
Subjt:  TLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWF-MRSINNCG

Query:  NDCCLRTRGAKYSIALQFLSLDEISEDS
         DCCLRT+ AKYSIALQFLSL+EISEDS
Subjt:  NDCCLRTRGAKYSIALQFLSLDEISEDS

A0A1S3CAT0 uncharacterized protein LOC103498887

2.4e-118

88.6

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Query:  MERFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHS
        ME+FFSV+QIH+ C+SSHSI L+SGPPSCGKTSLLFQFAFNLGLEGNVTFIC RRKLENKPPYLSQGVDP SETF+RIQMKYLEDD+GIKKYFSAFHLHS
Subjt:  MERFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHS

Query:  TLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWF-MRSINNCG
        TLP AVVIDDFGDFF +RRCQ KYANPRGRD+AMVRTLALCHNAVS+AN+ RPC+LVLSDTHHGESPRLIFIYKRWVPTIFTIRGDG+GWF +RSINNCG
Subjt:  TLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWF-MRSINNCG

Query:  NDCCLRTRGAKYSIALQFLSLDEISEDS
        NDCCLRT+ AKYSIALQFLSL+EISEDS
Subjt:  NDCCLRTRGAKYSIALQFLSLDEISEDS

A0A6J1D5D7 uncharacterized protein LOC111017459

7.8e-133

100

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Query:  MERFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHS
        MERFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHS
Subjt:  MERFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHS

Query:  TLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFMRSINNCGN
        TLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFMRSINNCGN
Subjt:  TLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFMRSINNCGN

Query:  DCCLRTRGAKYSIALQFLSLDEISEDSG
        DCCLRTRGAKYSIALQFLSLDEISEDSG
Subjt:  DCCLRTRGAKYSIALQFLSLDEISEDSG

A0A6J1H6C8 uncharacterized protein LOC111460863 isoform X1

1.9e-118

90.22

Show/hide

Query:  RFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHSTL
        RFFSVRQI + CDSSHSIML+SGPPSCGKTSLLFQFAFNLGLEGNVTFIC RRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGI KYFSAFHLH TL
Subjt:  RFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHSTL

Query:  PAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWF-MRSINNCGND
        P AVVIDDFGDFF +RRCQEKYANPRGRDLAMVRTLALCHNA+S+AN+ RPC+LVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWF +RSINNCGN+
Subjt:  PAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWF-MRSINNCGND

Query:  CCLRTRGAKYSIALQFLSLDEISED
        CCLRT+ AKYSIALQFLSL+E+SED
Subjt:  CCLRTRGAKYSIALQFLSLDEISED

E5GB61 Uncharacterized protein

2.4e-118

88.6

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Query:  MERFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHS
        ME+FFSV+QIH+ C+SSHSI L+SGPPSCGKTSLLFQFAFNLGLEGNVTFIC RRKLENKPPYLSQGVDP SETF+RIQMKYLEDD+GIKKYFSAFHLHS
Subjt:  MERFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHS

Query:  TLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWF-MRSINNCG
        TLP AVVIDDFGDFF +RRCQ KYANPRGRD+AMVRTLALCHNAVS+AN+ RPC+LVLSDTHHGESPRLIFIYKRWVPTIFTIRGDG+GWF +RSINNCG
Subjt:  TLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWF-MRSINNCG

Query:  NDCCLRTRGAKYSIALQFLSLDEISEDS
        NDCCLRT+ AKYSIALQFLSL+EISEDS
Subjt:  NDCCLRTRGAKYSIALQFLSLDEISEDS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G23255.1 unknown protein

2.4e-65

54.04

Show/hide

Query:  MERFFSVRQIHSHCDSSH---SIMLLSGPPSCGKTSLLFQFAFNLGLEGNVT---FICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFS
        +ERFF  ++  S  D +H   ++ LLSGP S GKTSLLFQ A N+      T   FIC R+K+E+ PP+LSQG+DP+S+ F RIQ+KY++DDEGI+KYF+
Subjt:  MERFFSVRQIHSHCDSSH---SIMLLSGPPSCGKTSLLFQFAFNLGLEGNVT---FICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFS

Query:  AFHLH--STLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFM
        AFHLH    LP+AV+IDDFGD+F          N R RD+AMVRTLALCHNA+  A ++  C+LVLS+T+HG+SPR +FIYKRW+P IFTI+G G G F+
Subjt:  AFHLH--STLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFM

Query:  RSINNCGNDCCLRTRGAKYSIALQFLSLDEISEDS
         + N+         R AKYSIALQ+L L++I +DS
Subjt:  RSINNCGNDCCLRTRGAKYSIALQFLSLDEISEDS

AT3G23255.2 unknown protein

1.5e-67

54.89

Show/hide

Query:  MERFFSVRQIHSHCDSSH---SIMLLSGPPSCGKTSLLFQFAFNLGLEGNVT---FICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFS
        +ERFF  ++  S  D +H   ++ LLSGP S GKTSLLFQ A N+      T   FIC R+K+E+ PP+LSQG+DP+S+ F RIQ+KY++DDEGI+KYF+
Subjt:  MERFFSVRQIHSHCDSSH---SIMLLSGPPSCGKTSLLFQFAFNLGLEGNVT---FICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFS

Query:  AFHLH--STLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFM
        AFHLH    LP+AV+IDDFGD+F          N R RD+AMVRTLALCHNA+  ANR   C+LVLS+T+HG+SPR +FIYKRW+P IFTI+G G G F+
Subjt:  AFHLH--STLPAAVVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFM

Query:  RSINNCGNDCCLRTRGAKYSIALQFLSLDEISEDS
         + N+         R AKYSIALQ+L L++I +DS
Subjt:  RSINNCGNDCCLRTRGAKYSIALQFLSLDEISEDS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGAGGTTCTTCTCGGTGCGGCAAATCCACTCTCACTGCGACTCTTCCCACTCGATCATGCTTCTTTCAGGGCCTCCTTCCTGCGGAAAGACCTCCTTACTT
TTTCAGTTTGCTTTTAATTTGGGTCTGGAGGGAAATGTAACCTTCATCTGCAAGCGCCGCAAATTAGAGAACAAACCTCCATATCTCTCCCAGGGAGTTGATCCA
GCCTCCGAAACCTTTCAGCGCATACAAATGAAGTATTTGGAAGACGACGAAGGAATTAAGAAGTACTTCTCTGCATTTCACCTGCATAGTACACTTCCTGCGGCA
GTTGTTATTGATGATTTTGGAGACTTTTTCATGGACCGGCGATGCCAAGAAAAGTATGCCAATCCTCGTGGAAGAGACTTAGCAATGGTTAGAACTCTAGCTCTT
TGTCACAATGCTGTGAGCATAGCGAATCGAAGTAGGCCTTGTAAGCTTGTGTTGTCTGATACACACCACGGAGAGTCCCCTAGGTTGATCTTCATATATAAGAGA
TGGGTTCCAACCATTTTCACCATTAGAGGTGATGGATCTGGATGGTTTATGAGAAGTATTAACAATTGTGGAAATGACTGTTGTTTGAGAACTAGAGGTGCAAAG
TACTCGATTGCCCTTCAGTTCCTGAGTTTGGACGAAATTTCTGAGGACAGTGGACTTCTACGCAATGCTACTGTTGATAAATTAGTATTTGTTGTAGAGAACAAT
GTTCTGATATCAGCTTCTTTATCGTATAATCTTAGTGTCTATGACTCTATATGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MERFFSVRQIHSHCDSSHSIMLLSGPPSCGKTSLLFQFAFNLGLEGNVTFICKRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGIKKYFSAFHLHSTLPAA
VVIDDFGDFFMDRRCQEKYANPRGRDLAMVRTLALCHNAVSIANRSRPCKLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFMRSINNCGNDCCLRTRGAK
YSIALQFLSLDEISEDSGLLRNATVDKLVFVVENNVLISASLSYNLSVYDSI

Moc07g00430 (gene) of Bitter gourd (OHB3-1) v2 genome