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Moc07g00610 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g00610
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr7:386036..388036
RNA-Seq ExpressionMoc07g00610
SyntenyMoc07g00610
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8550199.1 hypothetical protein F0562_001883 [Nyssa sinensis]6.4e-0432.7Show/hide
Query:  SHTVCTNTSVGDTDLFSDIVLPKPFDLPIGHTSSDRRAAHLDVDGADIRIDTIPTAGSADNVVLDVLPSAATAASTDIVVDASAGVDIISHDSIAAVGID
        S T C    V  TD F D+VLP          SS +    LD+  + +    + +   AD      LP     +++ IV  +      ++  S   + +D
Subjt:  SHTVCTNTSVGDTDLFSDIVLPKPFDLPIGHTSSDRRAAHLDVDGADIRIDTIPTAGSADNVVLDVLPSAATAASTDIVVDASAGVDIISHDSIAAVGID

Query:  VIVPPLVAPTTS----LRRSSRVHQPPCYLKDHHCSLLT-SSPLPSTGSRFPIQNHLTY
         I  P +AP TS    LR+S+RV  PP YLKD+HC+LL  SS   ST + +PI N+++Y
Subjt:  VIVPPLVAPTTS----LRRSSRVHQPPCYLKDHHCSLLT-SSPLPSTGSRFPIQNHLTY

XP_022143573.1 uncharacterized protein LOC111013441 [Momordica charantia]1.3e-0436.3Show/hide
Query:  FSDIVLPKPFDLPIGHTSSDRRAAHLDVDGADIRID-TIPTAGSADNVVLD-----VLPSAATAASTDIVVDASAGVDIISHDSIAAVGIDVIVPPLVAP
        F D+VLP   D  I     D  A H+D+  ADI I   +PT   +  V ++      +PSA  ++ST +V +            ++  G   IVP  + P
Subjt:  FSDIVLPKPFDLPIGHTSSDRRAAHLDVDGADIRID-TIPTAGSADNVVLD-----VLPSAATAASTDIVVDASAGVDIISHDSIAAVGIDVIVPPLVAP

Query:  TTSLRRSSRVHQPPCYLKDHHCSLLTSSPLPSTGS-RFPIQNHLTY
            RRS+R  + P YL+D HCSLLT+S LPS  S R P+Q +L+Y
Subjt:  TTSLRRSSRVHQPPCYLKDHHCSLLTSSPLPSTGS-RFPIQNHLTY

XP_022150388.1 uncharacterized protein LOC111018564 isoform X1 [Momordica charantia]1.3e-0431.79Show/hide
Query:  DLFSDIVLPKPFDL---PIGHTSSDRRAAHLDVDGADI---------RIDTIPTAGSADNVVLDVLPS-AATAASTDIVVDASAGVDI--------ISHD
        D F D VLPK FD    P G +S    A++L     D+             I  A +A  V     PS  A     D VVD      +        +  +
Subjt:  DLFSDIVLPKPFDL---PIGHTSSDRRAAHLDVDGADI---------RIDTIPTAGSADNVVLDVLPS-AATAASTDIVVDASAGVDI--------ISHD

Query:  SIAAVGIDV---IVPPL-------------VAPTTSLRRSSRVHQPPCYLKDHHCSLLTSSPLPSTGSRFPIQ
        S+    +D+   +VP +             V P+TS+RRS R  +PP YLKD+HC+LL S+ LP   SR+P+Q
Subjt:  SIAAVGIDV---IVPPL-------------VAPTTSLRRSSRVHQPPCYLKDHHCSLLTSSPLPSTGSRFPIQ

XP_022150391.1 uncharacterized protein LOC111018564 isoform X3 [Momordica charantia]2.9e-0458.14Show/hide
Query:  VAPTTSLRRSSRVHQPPCYLKDHHCSLLTSSPLPSTGSRFPIQ
        V P+TS+RRS R  +PP YLKD+HC+LL S+ LP   SR+P+Q
Subjt:  VAPTTSLRRSSRVHQPPCYLKDHHCSLLTSSPLPSTGSRFPIQ

TrEMBL top hitse value%identityAlignment
A0A2Z6N9Y5 Uncharacterized protein6.9e-0428.34Show/hide
Query:  INNKYSSKMIGKGDLWQGIYLL---ALRPLVSPVSHTV-CTNTSVGDTDLFSDIVLPKPFDLPIGHTSSDRRAAHLDVDGADIRIDT--IPTAGSADNV-
        I++  S KMIG  +L QG+Y+L   ++ P++SP +H V     ++   + F     P   D+    T  +  ++ L         DT  I T+ S  N+ 
Subjt:  INNKYSSKMIGKGDLWQGIYLL---ALRPLVSPVSHTV-CTNTSVGDTDLFSDIVLPKPFDLPIGHTSSDRRAAHLDVDGADIRIDT--IPTAGSADNV-

Query:  --VLDVLPSAATAASTDIVVDASAGVDIISHDSIAAVGIDVIVPPLVAPTTSLRRSSRVHQPPCYLKDHHCSLLTSSPLPSTGSRFP
          V DVLPS                    SH        D  +P  +  TT +R+S+R+ QPP  LKD+HC  ++++  PS  +  P
Subjt:  --VLDVLPSAATAASTDIVVDASAGVDIISHDSIAAVGIDVIVPPLVAPTTSLRRSSRVHQPPCYLKDHHCSLLTSSPLPSTGSRFP

A0A5J5C4X6 Retrotran_gag_3 domain-containing protein3.1e-0432.7Show/hide
Query:  SHTVCTNTSVGDTDLFSDIVLPKPFDLPIGHTSSDRRAAHLDVDGADIRIDTIPTAGSADNVVLDVLPSAATAASTDIVVDASAGVDIISHDSIAAVGID
        S T C    V  TD F D+VLP          SS +    LD+  + +    + +   AD      LP     +++ IV  +      ++  S   + +D
Subjt:  SHTVCTNTSVGDTDLFSDIVLPKPFDLPIGHTSSDRRAAHLDVDGADIRIDTIPTAGSADNVVLDVLPSAATAASTDIVVDASAGVDIISHDSIAAVGID

Query:  VIVPPLVAPTTS----LRRSSRVHQPPCYLKDHHCSLLT-SSPLPSTGSRFPIQNHLTY
         I  P +AP TS    LR+S+RV  PP YLKD+HC+LL  SS   ST + +PI N+++Y
Subjt:  VIVPPLVAPTTS----LRRSSRVHQPPCYLKDHHCSLLT-SSPLPSTGSRFPIQNHLTY

A0A6J1CR17 uncharacterized protein LOC1110134416.3e-0536.3Show/hide
Query:  FSDIVLPKPFDLPIGHTSSDRRAAHLDVDGADIRID-TIPTAGSADNVVLD-----VLPSAATAASTDIVVDASAGVDIISHDSIAAVGIDVIVPPLVAP
        F D+VLP   D  I     D  A H+D+  ADI I   +PT   +  V ++      +PSA  ++ST +V +            ++  G   IVP  + P
Subjt:  FSDIVLPKPFDLPIGHTSSDRRAAHLDVDGADIRID-TIPTAGSADNVVLD-----VLPSAATAASTDIVVDASAGVDIISHDSIAAVGIDVIVPPLVAP

Query:  TTSLRRSSRVHQPPCYLKDHHCSLLTSSPLPSTGS-RFPIQNHLTY
            RRS+R  + P YL+D HCSLLT+S LPS  S R P+Q +L+Y
Subjt:  TTSLRRSSRVHQPPCYLKDHHCSLLTSSPLPSTGS-RFPIQNHLTY

A0A6J1D9X8 uncharacterized protein LOC111018564 isoform X16.3e-0531.79Show/hide
Query:  DLFSDIVLPKPFDL---PIGHTSSDRRAAHLDVDGADI---------RIDTIPTAGSADNVVLDVLPS-AATAASTDIVVDASAGVDI--------ISHD
        D F D VLPK FD    P G +S    A++L     D+             I  A +A  V     PS  A     D VVD      +        +  +
Subjt:  DLFSDIVLPKPFDL---PIGHTSSDRRAAHLDVDGADI---------RIDTIPTAGSADNVVLDVLPS-AATAASTDIVVDASAGVDI--------ISHD

Query:  SIAAVGIDV---IVPPL-------------VAPTTSLRRSSRVHQPPCYLKDHHCSLLTSSPLPSTGSRFPIQ
        S+    +D+   +VP +             V P+TS+RRS R  +PP YLKD+HC+LL S+ LP   SR+P+Q
Subjt:  SIAAVGIDV---IVPPL-------------VAPTTSLRRSSRVHQPPCYLKDHHCSLLTSSPLPSTGSRFPIQ

A0A6J1DBD0 uncharacterized protein LOC111018564 isoform X31.4e-0458.14Show/hide
Query:  VAPTTSLRRSSRVHQPPCYLKDHHCSLLTSSPLPSTGSRFPIQ
        V P+TS+RRS R  +PP YLKD+HC+LL S+ LP   SR+P+Q
Subjt:  VAPTTSLRRSSRVHQPPCYLKDHHCSLLTSSPLPSTGSRFPIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTCCGCAACAGTTATATTCCCTCTACAAATAGAAAGTCGCCACGTGTCCAAAAGAGATTCGAAAGGACTTCTCTGTCAGGTCCACCTCGGTCCCGCCGAGGTGAA
TCGAGTTTGCCCTTTAAAAGATGAAGTATGGGCACCAAAGCTCGACCTGATTGTGGTCCACTCTAGTGTTCAGGTCGAAACCGGAGATCGGGTTCGAGCTCGATTCGTGA
AGAACCGTTGTGCAGATTCCTGCATAAACAACAAGTACTCTTCGAAGATGATTGGCAAGGGTGACTTATGGCAGGGCATCTATTTGCTAGCTCTTCGGCCGCTGGTTTCC
CCGGTTTCCCATACTGTATGCACTAATACAAGTGTTGGGGATACTGATCTGTTTTCTGATATTGTATTACCCAAGCCTTTTGATTTGCCTATTGGACATACATCTTCTGA
TAGGCGTGCTGCACACTTGGATGTTGATGGGGCTGATATTAGGATTGATACTATTCCTACTGCTGGATCTGCTGATAATGTTGTACTTGATGTTTTACCTTCTGCTGCCA
CTGCTGCCTCTACTGATATTGTTGTTGATGCTTCTGCTGGAGTTGATATTATTTCTCATGATTCCATTGCTGCTGTTGGTATTGATGTTATAGTTCCTCCTTTGGTGGCT
CCTACTACTAGTCTTCGTAGGTCTTCTCGGGTACATCAGCCGCCTTGTTACTTGAAAGATCATCACTGCAGCTTACTCACTTCCAGCCCTTTGCCTTCTACGGGTTCTCG
GTTTCCTATACAAAACCATTTGACTTATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATTCCGCAACAGTTATATTCCCTCTACAAATAGAAAGTCGCCACGTGTCCAAAAGAGATTCGAAAGGACTTCTCTGTCAGGTCCACCTCGGTCCCGCCGAGGTGAA
TCGAGTTTGCCCTTTAAAAGATGAAGTATGGGCACCAAAGCTCGACCTGATTGTGGTCCACTCTAGTGTTCAGGTCGAAACCGGAGATCGGGTTCGAGCTCGATTCGTGA
AGAACCGTTGTGCAGATTCCTGCATAAACAACAAGTACTCTTCGAAGATGATTGGCAAGGGTGACTTATGGCAGGGCATCTATTTGCTAGCTCTTCGGCCGCTGGTTTCC
CCGGTTTCCCATACTGTATGCACTAATACAAGTGTTGGGGATACTGATCTGTTTTCTGATATTGTATTACCCAAGCCTTTTGATTTGCCTATTGGACATACATCTTCTGA
TAGGCGTGCTGCACACTTGGATGTTGATGGGGCTGATATTAGGATTGATACTATTCCTACTGCTGGATCTGCTGATAATGTTGTACTTGATGTTTTACCTTCTGCTGCCA
CTGCTGCCTCTACTGATATTGTTGTTGATGCTTCTGCTGGAGTTGATATTATTTCTCATGATTCCATTGCTGCTGTTGGTATTGATGTTATAGTTCCTCCTTTGGTGGCT
CCTACTACTAGTCTTCGTAGGTCTTCTCGGGTACATCAGCCGCCTTGTTACTTGAAAGATCATCACTGCAGCTTACTCACTTCCAGCCCTTTGCCTTCTACGGGTTCTCG
GTTTCCTATACAAAACCATTTGACTTATGATTGA
Protein sequenceShow/hide protein sequence
MYSATVIFPLQIESRHVSKRDSKGLLCQVHLGPAEVNRVCPLKDEVWAPKLDLIVVHSSVQVETGDRVRARFVKNRCADSCINNKYSSKMIGKGDLWQGIYLLALRPLVS
PVSHTVCTNTSVGDTDLFSDIVLPKPFDLPIGHTSSDRRAAHLDVDGADIRIDTIPTAGSADNVVLDVLPSAATAASTDIVVDASAGVDIISHDSIAAVGIDVIVPPLVA
PTTSLRRSSRVHQPPCYLKDHHCSLLTSSPLPSTGSRFPIQNHLTYD