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Moc07g00700 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g00700
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr7:435218..435880
RNA-Seq ExpressionMoc07g00700
SyntenyMoc07g00700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7561662.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]1.2e-2737.8Show/hide
Query:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV
        M  + W+ +D + +  IR+TLS  V   VAKE   + L+K L D YEKPSAN K+FL  K F++ MEEG  V  H+NE   I+N+L  + ++ ++EV+A+
Subjt:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV

Query:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGKMKYNEEQ---EHMNNTGSGSSSGEVECFY
         L+ S  +SWE M+  +SNS+G   LKF  + D  L EE  R+++    STS A N        + +G+ + + N+ +   +  N  G   S   VEC+ 
Subjt:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGKMKYNEEQ---EHMNNTGSGSSSGEVECFY

Query:  CHNKGHFKN
        C   GHFK+
Subjt:  CHNKGHFKN

KAG7584790.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]9.0e-2837.32Show/hide
Query:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV
        M  + W+ +D + +  IR+TLS  V   VAKE   + L+K L D YEKPSAN K+FL  K F++ MEEG  V  H+NE   I+N+L  + ++ ++EV+A+
Subjt:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV

Query:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGKMKYNEEQ---EHMNNTGSGSSSGEVECFY
         LL S  +SWE M+  +SNS+G   LKF  + D  L EE +R            E  + SA   + +G+ + + N+ +   +  N  G   S   VEC+ 
Subjt:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGKMKYNEEQ---EHMNNTGSGSSSGEVECFY

Query:  CHNKGHFKN
        C   GHFK+
Subjt:  CHNKGHFKN

KAG7593230.1 Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa]5.3e-2838.14Show/hide
Query:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV
        M  + W+ +D + +  IR+TLS  V   VAKE   + L+K L D YEKPSAN K+FL  K F++ MEEG  V  H+NE   I+N+L  + ++ ++EV+A+
Subjt:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV

Query:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGKMKYNEEQ---EHMNNTGSGSSSGEVECFY
         LL S  +SWE M+  +SNS+G   LKF  + D  L EE  R+++    STS A N        + +G+ + + N+ +   +  N  G   S   VEC+ 
Subjt:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGKMKYNEEQ---EHMNNTGSGSSSGEVECFY

Query:  CHNKGHFKNTIGSLK
        C   GHFK T+ + K
Subjt:  CHNKGHFKNTIGSLK

KYP40338.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]1.3e-2636.24Show/hide
Query:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV
        M +  W+ +D KA+  IR+TLS  V   +AKE     L+ AL   YEKPSA  K+ L  + FN+ M EG S   HINEL  I  +L  + +  +EEV+A+
Subjt:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV

Query:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGKMKYNEEQEHMNNTGSGSSSGEVECFYCHN
         LL+S  +SW      +S+S G N LKF  + D  LSEE +R+    S ++S    E       +  G+GK K   E+    N  S + S  +EC+ C  
Subjt:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGKMKYNEEQEHMNNTGSGSSSGEVECFYCHN

Query:  KGHFKNTIGSLKRIRKIR
         GH+KN   S  + ++++
Subjt:  KGHFKNTIGSLKRIRKIR

KYP76436.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]1.3e-2636.24Show/hide
Query:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV
        M +  W+ +D KA+  IR+TLS  V   +AKE     L+ AL   YEKPSA  K+ L  + FN+ M EG S   HINEL  I  +L  + +  +EEV+A+
Subjt:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV

Query:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGKMKYNEEQEHMNNTGSGSSSGEVECFYCHN
         LL+S  +SW      +S+S G N LKF  + D  LSEE +R+    S ++S    E       +  G+GK K   E+    N  S + S  +EC+ C  
Subjt:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGKMKYNEEQEHMNNTGSGSSSGEVECFYCHN

Query:  KGHFKNTIGSLKRIRKIR
         GH+KN   S  + ++++
Subjt:  KGHFKNTIGSLKRIRKIR

TrEMBL top hitse value%identityAlignment
A0A2N9G6Q3 Uncharacterized protein4.8e-2737.67Show/hide
Query:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV
        M D  W  +D + +  IR+TLS  V   V KE    EL+ AL   YEKPSAN K+ L  K FN+ M EGT+V  H+NE   I N+L  + ++ ++E++A+
Subjt:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV

Query:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGK-MKYNEEQEHMNNTGSGSSSG-EVECFYC
         +L S  +SWE M++ +SNS G+  LK++ I D  L EE +R+ +    S+SG      SAL  + +G+GK   YN  +       S S  G ++EC+ C
Subjt:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGK-MKYNEEQEHMNNTGSGSSSG-EVECFYC

Query:  HNKGHFKNTIGSLKR
           GH +     LK+
Subjt:  HNKGHFKNTIGSLKR

A0A2N9GHK9 Uncharacterized protein4.8e-2737.67Show/hide
Query:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV
        M D  W  +D + +  IR+TLS  V   V KE    EL+ AL   YEKPSAN K+ L  K FN+ M EGT+V  H+NE   I N+L  + ++ ++E++A+
Subjt:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV

Query:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGK-MKYNEEQEHMNNTGSGSSSG-EVECFYC
         +L S  +SWE M++ +SNS G+  LK++ I D  L EE +R+ +    S+SG      SAL  + +G+GK   YN  +       S S  G ++EC+ C
Subjt:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGK-MKYNEEQEHMNNTGSGSSSG-EVECFYC

Query:  HNKGHFKNTIGSLKR
           GH +     LK+
Subjt:  HNKGHFKNTIGSLKR

A0A2N9IKI1 Uncharacterized protein4.8e-2737.67Show/hide
Query:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV
        M D  W  +D + +  IR+TLS  V   V KE    EL+ AL   YEKPSAN K+ L  K FN+ M EGT+V  H+NE   I N+L  + ++ ++E++A+
Subjt:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV

Query:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGK-MKYNEEQEHMNNTGSGSSSG-EVECFYC
         +L S  +SWE M++ +SNS G+  LK++ I D  L EE +R+ +    S+SG      SAL  + +G+GK   YN  +       S S  G ++EC+ C
Subjt:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGK-MKYNEEQEHMNNTGSGSSSG-EVECFYC

Query:  HNKGHFKNTIGSLKR
           GH +     LK+
Subjt:  HNKGHFKNTIGSLKR

A0A2N9IPG8 Uncharacterized protein4.8e-2737.67Show/hide
Query:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV
        M D  W  +D + +  IR+TLS  V   V KE    EL+ AL   YEKPSAN K+ L  K FN+ M EGT+V  H+NE   I N+L  + ++ ++E++A+
Subjt:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV

Query:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGK-MKYNEEQEHMNNTGSGSSSG-EVECFYC
         +L S  +SWE M++ +SNS G+  LK++ I D  L EE +R+ +    S+SG      SAL  + +G+GK   YN  +       S S  G ++EC+ C
Subjt:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGK-MKYNEEQEHMNNTGSGSSSG-EVECFYC

Query:  HNKGHFKNTIGSLKR
           GH +     LK+
Subjt:  HNKGHFKNTIGSLKR

A0A2N9J3Y8 Uncharacterized protein4.8e-2737.67Show/hide
Query:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV
        M D  W  +D + +  IR+TLS  V   V KE    EL+ AL   YEKPSAN K+ L  K FN+ M EGT+V  H+NE   I N+L  + ++ ++E++A+
Subjt:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV

Query:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGK-MKYNEEQEHMNNTGSGSSSG-EVECFYC
         +L S  +SWE M++ +SNS G+  LK++ I D  L EE +R+ +    S+SG      SAL  + +G+GK   YN  +       S S  G ++EC+ C
Subjt:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGK-MKYNEEQEHMNNTGSGSSSG-EVECFYC

Query:  HNKGHFKNTIGSLKR
           GH +     LK+
Subjt:  HNKGHFKNTIGSLKR

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.8e-1326.44Show/hide
Query:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV
        M  + W ++D++A + IR+ LS  V + +  E  A+ +   L+  Y   +   K++L  + + +HM EGT+   H+N    ++ +L  + VKIEEE KA+
Subjt:  MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAV

Query:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGKMKYNEEQEHMNNTGSG---SSSGEVECFY
         LL S   S++ +   + +  G+ +++   +  A L  E  RK           EN+ + AL+ + +G+   + +         G     S S    C+ 
Subjt:  RLLTSFFDSWETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGKMKYNEEQEHMNNTGSG---SSSGEVECFY

Query:  CHNKGHFK
        C+  GHFK
Subjt:  CHNKGHFK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGACAAAGCTTGGAATGAGATGGATGATAAGGCCGTTGCAAATATCCGAATGACACTATCAATGGGGGTGTGTAGTCTCGTGGCAAAAGAGATGATTGCAAAAGA
GTTGTTGAAGGCCTTGCAAGACAAGTATGAAAAACCTTCTGCCAATACAAAAATATTTCTATGGACGAAGTATTTTAATATCCACATGGAGGAGGGAACCTCGGTGAATC
CCCACATTAATGAGCTCACCGATATCTTGAACAAGTTAGAAGGGATGAGTGTCAAGATTGAAGAGGAGGTAAAAGCTGTGAGACTGTTGACATCTTTTTTTGACAGTTGG
GAGACGATGAAGATCGTGCTGTCGAATTCACTAGGAGAAAATAGCTTGAAATTTTCAGCTATTTGTGATGCCGCCTTATCTGAGGAAGCCCAGAGAAAATTAGAGAAAAT
GTCTGCATCTACTTCAGGGGCAGAAAATGAGGTTGAATCAGCTTTGGTGGCTCAGTTTAAGGGGAAGGGCAAGATGAAGTACAACGAGGAGCAAGAACATATGAATAACA
CGGGTAGTGGGAGTTCCAGTGGAGAAGTTGAATGTTTTTACTGCCATAATAAGGGTCACTTCAAAAACACTATAGGAAGCTTAAAGAGGATCAGAAAAATTAGGACACTC
TAA
mRNA sequenceShow/hide mRNA sequence
ATGACAGACAAAGCTTGGAATGAGATGGATGATAAGGCCGTTGCAAATATCCGAATGACACTATCAATGGGGGTGTGTAGTCTCGTGGCAAAAGAGATGATTGCAAAAGA
GTTGTTGAAGGCCTTGCAAGACAAGTATGAAAAACCTTCTGCCAATACAAAAATATTTCTATGGACGAAGTATTTTAATATCCACATGGAGGAGGGAACCTCGGTGAATC
CCCACATTAATGAGCTCACCGATATCTTGAACAAGTTAGAAGGGATGAGTGTCAAGATTGAAGAGGAGGTAAAAGCTGTGAGACTGTTGACATCTTTTTTTGACAGTTGG
GAGACGATGAAGATCGTGCTGTCGAATTCACTAGGAGAAAATAGCTTGAAATTTTCAGCTATTTGTGATGCCGCCTTATCTGAGGAAGCCCAGAGAAAATTAGAGAAAAT
GTCTGCATCTACTTCAGGGGCAGAAAATGAGGTTGAATCAGCTTTGGTGGCTCAGTTTAAGGGGAAGGGCAAGATGAAGTACAACGAGGAGCAAGAACATATGAATAACA
CGGGTAGTGGGAGTTCCAGTGGAGAAGTTGAATGTTTTTACTGCCATAATAAGGGTCACTTCAAAAACACTATAGGAAGCTTAAAGAGGATCAGAAAAATTAGGACACTC
TAA
Protein sequenceShow/hide protein sequence
MTDKAWNEMDDKAVANIRMTLSMGVCSLVAKEMIAKELLKALQDKYEKPSANTKIFLWTKYFNIHMEEGTSVNPHINELTDILNKLEGMSVKIEEEVKAVRLLTSFFDSW
ETMKIVLSNSLGENSLKFSAICDAALSEEAQRKLEKMSASTSGAENEVESALVAQFKGKGKMKYNEEQEHMNNTGSGSSSGEVECFYCHNKGHFKNTIGSLKRIRKIRTL