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Moc07g01200 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g01200
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr7:996400..998534
RNA-Seq ExpressionMoc07g01200
SyntenyMoc07g01200
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035407.1 uncharacterized protein E6C27_scaffold285G00220 [Cucumis melo var. makuwa]8.1e-1449.06Show/hide
Query:  NPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVKLDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEFLLTEGVGSSEPTPNPAYEAWSTMDQAFLEWL
        NP    +V+++    PT IH  G  LS VLIVKLDEKNY+L +  +L VL+ QK + F+LGT  QP   L    V      PNPAYE+W  +DQ+ L WL
Subjt:  NPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVKLDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEFLLTEGVGSSEPTPNPAYEAWSTMDQAFLEWL

Query:  YGSMTP
        YGSM+P
Subjt:  YGSMTP

TYK25744.1 uncharacterized protein E5676_scaffold862G00400 [Cucumis melo var. makuwa]8.1e-1449.06Show/hide
Query:  NPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVKLDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEFLLTEGVGSSEPTPNPAYEAWSTMDQAFLEWL
        NP    +V+++    PT IH  G  LS VLIVKLDEKNY+L +  +L VL+ QK + F+LGT  QP   L    V      PNPAYE+W  +DQ+ L WL
Subjt:  NPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVKLDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEFLLTEGVGSSEPTPNPAYEAWSTMDQAFLEWL

Query:  YGSMTP
        YGSM+P
Subjt:  YGSMTP

XP_022143579.1 ankyrin repeat-containing protein NPR4-like [Momordica charantia]6.4e-1953.27Show/hide
Query:  NPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVKLDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEF-LLTEGVGSSEPTPNPAYEAWSTMDQAFLEW
        N + Q TV S   I+      FG+PLST L VKLD+KNY L +  VLAVL  QK+DG++L TK  P+++   T   G  EPT NPAYE WS +DQAF  W
Subjt:  NPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVKLDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEF-LLTEGVGSSEPTPNPAYEAWSTMDQAFLEW

Query:  LYGSMTP
        L+GSMTP
Subjt:  LYGSMTP

XP_022157748.1 uncharacterized protein LOC111024384 isoform X1 [Momordica charantia]2.1e-1745.6Show/hide
Query:  METIESPSKTIGDDILNPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVKLDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEFLL---TEGVGSSEPT
        M T E+ + ++   ++   +  T N     +P +   FG+PL TVL VKLD+KNY L R  VLAVL+ QK DG++LGT A+P +FL+   TEG  S    
Subjt:  METIESPSKTIGDDILNPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVKLDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEFLL---TEGVGSSEPT

Query:  PNPAYEAWSTMDQAFLEWLYGSMTP
         NP Y  W  +DQA L WL+GSMTP
Subjt:  PNPAYEAWSTMDQAFLEWLYGSMTP

XP_022157750.1 uncharacterized protein LOC111024384 isoform X2 [Momordica charantia]2.1e-1745.6Show/hide
Query:  METIESPSKTIGDDILNPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVKLDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEFLL---TEGVGSSEPT
        M T E+ + ++   ++   +  T N     +P +   FG+PL TVL VKLD+KNY L R  VLAVL+ QK DG++LGT A+P +FL+   TEG  S    
Subjt:  METIESPSKTIGDDILNPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVKLDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEFLL---TEGVGSSEPT

Query:  PNPAYEAWSTMDQAFLEWLYGSMTP
         NP Y  W  +DQA L WL+GSMTP
Subjt:  PNPAYEAWSTMDQAFLEWLYGSMTP

TrEMBL top hitse value%identityAlignment
A0A5A7T1E0 AB hydrolase-1 domain-containing protein3.9e-1449.06Show/hide
Query:  NPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVKLDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEFLLTEGVGSSEPTPNPAYEAWSTMDQAFLEWL
        NP    +V+++    PT IH  G  LS VLIVKLDEKNY+L +  +L VL+ QK + F+LGT  QP   L    V      PNPAYE+W  +DQ+ L WL
Subjt:  NPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVKLDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEFLLTEGVGSSEPTPNPAYEAWSTMDQAFLEWL

Query:  YGSMTP
        YGSM+P
Subjt:  YGSMTP

A0A5D3DQA0 AB hydrolase-1 domain-containing protein3.9e-1449.06Show/hide
Query:  NPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVKLDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEFLLTEGVGSSEPTPNPAYEAWSTMDQAFLEWL
        NP    +V+++    PT IH  G  LS VLIVKLDEKNY+L +  +L VL+ QK + F+LGT  QP   L    V      PNPAYE+W  +DQ+ L WL
Subjt:  NPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVKLDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEFLLTEGVGSSEPTPNPAYEAWSTMDQAFLEWL

Query:  YGSMTP
        YGSM+P
Subjt:  YGSMTP

A0A6J1CPQ7 ankyrin repeat-containing protein NPR4-like3.1e-1953.27Show/hide
Query:  NPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVKLDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEF-LLTEGVGSSEPTPNPAYEAWSTMDQAFLEW
        N + Q TV S   I+      FG+PLST L VKLD+KNY L +  VLAVL  QK+DG++L TK  P+++   T   G  EPT NPAYE WS +DQAF  W
Subjt:  NPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVKLDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEF-LLTEGVGSSEPTPNPAYEAWSTMDQAFLEW

Query:  LYGSMTP
        L+GSMTP
Subjt:  LYGSMTP

A0A6J1DTZ7 uncharacterized protein LOC111024384 isoform X29.9e-1845.6Show/hide
Query:  METIESPSKTIGDDILNPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVKLDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEFLL---TEGVGSSEPT
        M T E+ + ++   ++   +  T N     +P +   FG+PL TVL VKLD+KNY L R  VLAVL+ QK DG++LGT A+P +FL+   TEG  S    
Subjt:  METIESPSKTIGDDILNPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVKLDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEFLL---TEGVGSSEPT

Query:  PNPAYEAWSTMDQAFLEWLYGSMTP
         NP Y  W  +DQA L WL+GSMTP
Subjt:  PNPAYEAWSTMDQAFLEWLYGSMTP

A0A6J1DU77 uncharacterized protein LOC111024384 isoform X19.9e-1845.6Show/hide
Query:  METIESPSKTIGDDILNPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVKLDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEFLL---TEGVGSSEPT
        M T E+ + ++   ++   +  T N     +P +   FG+PL TVL VKLD+KNY L R  VLAVL+ QK DG++LGT A+P +FL+   TEG  S    
Subjt:  METIESPSKTIGDDILNPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVKLDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEFLL---TEGVGSSEPT

Query:  PNPAYEAWSTMDQAFLEWLYGSMTP
         NP Y  W  +DQA L WL+GSMTP
Subjt:  PNPAYEAWSTMDQAFLEWLYGSMTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGGGAAGGGAATACCCTGGACACGTGGAGGACCCCTATTGGTGCTCCAAGATGGCTCATGAGTCATGCCCAGCTCGGGGAGCCGAGATGGCCGCCACCAACACC
GACAAATGCTAAGTATGAGGGCCGAGGTGAACCTGGCCCAGAGCCACCAGCTCATCCATACCCTGTGTCACTGATGGAAACTATTGAAAGTCCATCTAAAACTATTGGAG
ATGATATCCTAAACCCAACGTCACAAGTTACCGTCAACTCACTATTCCCCATTAACCCAACCTACATACATCCTTTTGGAAATCCACTCTCCACAGTCCTCATCGTGAAG
CTAGATGAGAAAAACTACATCCTAGAGAGGAAGACGGTTCTTGCTGTGCTGAAAGATCAAAAACTAGATGGCTTCATACTAGGAACTAAGGCGCAACCTGCAGAGTTCTT
ACTAACAGAAGGGGTTGGTTCGTCGGAGCCGACTCCAAATCCAGCATATGAAGCATGGTCCACAATGGATCAAGCTTTCCTTGAGTGGTTGTACGGGTCAATGACCCCAC
CATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGGGAAGGGAATACCCTGGACACGTGGAGGACCCCTATTGGTGCTCCAAGATGGCTCATGAGTCATGCCCAGCTCGGGGAGCCGAGATGGCCGCCACCAACACC
GACAAATGCTAAGTATGAGGGCCGAGGTGAACCTGGCCCAGAGCCACCAGCTCATCCATACCCTGTGTCACTGATGGAAACTATTGAAAGTCCATCTAAAACTATTGGAG
ATGATATCCTAAACCCAACGTCACAAGTTACCGTCAACTCACTATTCCCCATTAACCCAACCTACATACATCCTTTTGGAAATCCACTCTCCACAGTCCTCATCGTGAAG
CTAGATGAGAAAAACTACATCCTAGAGAGGAAGACGGTTCTTGCTGTGCTGAAAGATCAAAAACTAGATGGCTTCATACTAGGAACTAAGGCGCAACCTGCAGAGTTCTT
ACTAACAGAAGGGGTTGGTTCGTCGGAGCCGACTCCAAATCCAGCATATGAAGCATGGTCCACAATGGATCAAGCTTTCCTTGAGTGGTTGTACGGGTCAATGACCCCAC
CATAG
Protein sequenceShow/hide protein sequence
MFGEGNTLDTWRTPIGAPRWLMSHAQLGEPRWPPPTPTNAKYEGRGEPGPEPPAHPYPVSLMETIESPSKTIGDDILNPTSQVTVNSLFPINPTYIHPFGNPLSTVLIVK
LDEKNYILERKTVLAVLKDQKLDGFILGTKAQPAEFLLTEGVGSSEPTPNPAYEAWSTMDQAFLEWLYGSMTPP