; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc07g01340 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g01340
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:1077292..1080985
RNA-Seq ExpressionMoc07g01340
SyntenyMoc07g01340
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5463231.1 hypothetical protein F2P56_019161 [Juglans regia]8.0e-4545.63Show/hide
Query:  VKIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNILANVHGIS
        ++ +VEKFDG INFGLWQVQVKDVL QSGLHKALKGRP+   S   S           + +   +S MSDEDWE++DLRAAS IR  LAKN+LAN+HGIS
Subjt:  VKIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNILANVHGIS

Query:  TAKELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGTKISD-----EGRTSHEDS---------------------------------------------
        TAK+L EKLE LYQ KG+SNR+YLKEQFHTL M EGT ISD      G  S  +S                                             
Subjt:  TAKELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGTKISD-----EGRTSHEDS---------------------------------------------

Query:  ------------------ALVASNWKKKKDSVQKKACCWGCGQSGHMNKNCPNR-VGSSKGSR
                          A+V +   KKK+S++ K  CWGCGQSGH+ KNCP    GS+ GS+
Subjt:  ------------------ALVASNWKKKKDSVQKKACCWGCGQSGHMNKNCPNR-VGSSKGSR

KAF7802225.1 cytochrome p450 [Senna tora]8.6e-4753.68Show/hide
Query:  MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNIL
        MS F S VK DVEKFDG INFGLWQVQVKDVL QSGLHKAL+G+ S   S+K                   +SSMSD DWEE+DLRAAS IR SLAKN+L
Subjt:  MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNIL

Query:  ANVHGISTAKELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGTKISDEGRT---------------SHEDSAL-----VASNWKKKKD-------SVQK
        ANV GISTAKEL +KLE LYQAKGISN L LKEQFHTL M+EGTKISD   T                 ED  L     + S+++  K           K
Subjt:  ANVHGISTAKELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGTKISDEGRT---------------SHEDSAL-----VASNWKKKKD-------SVQK

Query:  KACCWGCGQSGHMNKNCPNRVGSSKGSRRDA
           CW CG+SGH+ KNCP     + GS  DA
Subjt:  KACCWGCGQSGHMNKNCPNRVGSSKGSRRDA

KAF7810708.1 cytochrome p450 [Senna tora]3.8e-4752.17Show/hide
Query:  MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNIL
        MS F S +K DVEKFDG INFG WQVQVKDVL QSGL KAL+G+ S   S+K                   +SSMSD DWEE+DLRAAS IR  LAKN+L
Subjt:  MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNIL

Query:  ANVHGISTAKELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGTKISDEGRTSHE--------------------------DSALVASNWKKKKDSVQKK
        ANV GISTAKEL +KLE LYQAKGISNRL LKEQFHTLRM E TKISD   T ++                          DS +V  N    +    K 
Subjt:  ANVHGISTAKELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGTKISDEGRTSHE--------------------------DSALVASNWKKKKDSVQKK

Query:  ACCWGCGQSGHMNKNCPNRVGSSKGSRRDA
          CW CG+SGH+ KNCP     + GS  DA
Subjt:  ACCWGCGQSGHMNKNCPNRVGSSKGSRRDA

KAG7577502.1 F-box associated domain type 1 [Arabidopsis thaliana x Arabidopsis arenosa]1.8e-4444.16Show/hide
Query:  VKIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNILANVHGIS
        +K+++EKFDG INFGLWQVQVKD+L Q GLHKALKG+P+     +                 S K  +SD DWE++DLRAAS IR  LAKNILANVHGIS
Subjt:  VKIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNILANVHGIS

Query:  TAKELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGTKISD-----------------------------------------------------------
        TAKEL EKLE LYQAKG+SNR+YLKE+FHTLRM EGT +SD                                                           
Subjt:  TAKELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGTKISD-----------------------------------------------------------

Query:  ---EGRTSH------EDSALVASNWKKKKDSVQKKACCWGCGQSGHMNKNCPNRVGSSKGSRRDADKDVMLAVP
           E R S+       +SALVA N +KK++ ++KK  CWGCGQSGH+ +NCPN  G S     + D D     P
Subjt:  ---EGRTSH------EDSALVASNWKKKKDSVQKKACCWGCGQSGHMNKNCPNRVGSSKGSRRDADKDVMLAVP

XP_022139673.1 uncharacterized protein LOC111010521 [Momordica charantia]9.7e-8368.97Show/hide
Query:  MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNIL
        MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVL QS LHKALKGRPSEGAS+KLS DGGPMESSGGSSRGSKKSSMS EDWEEMDLRAAS IRTSLAKNIL
Subjt:  MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNIL

Query:  ANVHGISTAKELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGTKISD----------------------------------------------------
        ANVH ISTAKEL EKLEALYQAKGISNRLYLKEQFHTL+MEEG KISD                                                    
Subjt:  ANVHGISTAKELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGTKISD----------------------------------------------------

Query:  ----------------EGRTSHEDSALVASNWKKKKDSVQKKACCWGCGQSGHMNKNCPNR
                        EGRTSHEDSALV SNWKKKKDSVQKKACCWGCGQSGHM K+CPNR
Subjt:  ----------------EGRTSHEDSALVASNWKKKKDSVQKKACCWGCGQSGHMNKNCPNR

TrEMBL top hitse value%identityAlignment
A0A6A2Y9V1 CCHC-type domain-containing protein6.9e-4250.95Show/hide
Query:  KIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNILANVHGIST
        + D+EKFDG INFGLWQVQVKD+L QSGL+KALKG+P+         +G   +    SS    KS MS+E+WEE+D+RAAS IR  LAKN+LANV   S+
Subjt:  KIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNILANVHGIST

Query:  AKELSEKLEALYQAKGISNRLYLKEQFHTLRMEE---GTKISDEGR------TSHEDSALVASNWKKKKDSVQKKACCWGCGQSGHMNKNCPN-RVGSSK
          EL EKLE +YQAK +SNRLYLKE+FH L+MEE      IS+E R       S E  AL     +KK    +KK  CWGCGQ GH+ K+C N    S+ 
Subjt:  AKELSEKLEALYQAKGISNRLYLKEQFHTLRMEE---GTKISDEGR------TSHEDSALVASNWKKKKDSVQKKACCWGCGQSGHMNKNCPN-RVGSSK

Query:  GSRRDADKDV
        GS++    +V
Subjt:  GSRRDADKDV

A0A6A2YS90 Transcription initiation factor IIA subunit 21.4e-3942.07Show/hide
Query:  KIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNILANVHGIST
        + D+EKFDG INFGLWQVQVKD+L QSGL+KALKG+P+         +G   +    SS    KS MS+E+WEE+D+RAAS IR  LAKN+LANV   S+
Subjt:  KIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNILANVHGIST

Query:  AKELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGTKISD------------------------------------------------------------
         KEL EKLE +YQAK +SNRLYLKE+FH L+MEEGTKISD                                                            
Subjt:  AKELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGTKISD------------------------------------------------------------

Query:  ---------EGRTSHEDSALVASNWKKKKDSVQKKACCWGCGQSGHMNKNCPN-RVGSSKGSRRDADKDVM
                 E ++S   +  V  N KK K S +KK  CWGCGQ GH+ K+C N    S+ GS+ DA   V+
Subjt:  ---------EGRTSHEDSALVASNWKKKKDSVQKKACCWGCGQSGHMNKNCPN-RVGSSKGSRRDADKDVM

A0A6A3BK59 CCHC-type domain-containing protein1.4e-3942.07Show/hide
Query:  KIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNILANVHGIST
        + D+EKFDG INFGLWQVQVKD+L QSGL+KALKG+P+         +G   +    SS    KS MS+E+WEE+D+RAAS IR  LAKN+LANV   S+
Subjt:  KIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNILANVHGIST

Query:  AKELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGTKISD------------------------------------------------------------
         KEL EKLE +YQAK +SNRLYLKE+FH L+MEEGTKISD                                                            
Subjt:  AKELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGTKISD------------------------------------------------------------

Query:  ---------EGRTSHEDSALVASNWKKKKDSVQKKACCWGCGQSGHMNKNCPN-RVGSSKGSRRDADKDVM
                 E ++S   +  V  N KK K S +KK  CWGCGQ GH+ K+C N    S+ GS+ DA   V+
Subjt:  ---------EGRTSHEDSALVASNWKKKKDSVQKKACCWGCGQSGHMNKNCPN-RVGSSKGSRRDADKDVM

A0A6A3CWI3 CCHC-type domain-containing protein7.1e-3941.7Show/hide
Query:  KIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNILANVHGIST
        + D+EKFDG INFGLWQVQVKD+L QSGL+KALKG+P+         +G   +    SS    KS MS+E+WEE+D+RAAS IR  LAKN+LANV   S+
Subjt:  KIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNILANVHGIST

Query:  AKELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGTKISD------------------------------------------------------------
         KEL EKLE +YQAK +SNRLYLKE+FH L+MEEGTKISD                                                            
Subjt:  AKELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGTKISD------------------------------------------------------------

Query:  ---------EGRTSHEDSALVASNWKKKKDSVQKKACCWGCGQSGHMNKNCPN-RVGSSKGSRRDADKDVM
                 E ++S   +  V  N KK K S +KK  CWGCGQ GH+ K+C N     + GS+ DA   V+
Subjt:  ---------EGRTSHEDSALVASNWKKKKDSVQKKACCWGCGQSGHMNKNCPN-RVGSSKGSRRDADKDVM

A0A6J1CG82 uncharacterized protein LOC1110105214.7e-8368.97Show/hide
Query:  MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNIL
        MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVL QS LHKALKGRPSEGAS+KLS DGGPMESSGGSSRGSKKSSMS EDWEEMDLRAAS IRTSLAKNIL
Subjt:  MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNIL

Query:  ANVHGISTAKELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGTKISD----------------------------------------------------
        ANVH ISTAKEL EKLEALYQAKGISNRLYLKEQFHTL+MEEG KISD                                                    
Subjt:  ANVHGISTAKELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGTKISD----------------------------------------------------

Query:  ----------------EGRTSHEDSALVASNWKKKKDSVQKKACCWGCGQSGHMNKNCPNR
                        EGRTSHEDSALV SNWKKKKDSVQKKACCWGCGQSGHM K+CPNR
Subjt:  ----------------EGRTSHEDSALVASNWKKKKDSVQKKACCWGCGQSGHMNKNCPNR

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.6e-1636.43Show/hide
Query:  MSPVKIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNILANVH
        MS VK +V KF+G   F  WQ +++D+L Q GLHK L                             K  +M  EDW ++D RAAS IR  L+ +++ N+ 
Subjt:  MSPVKIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNILANVH

Query:  GISTAKELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGT
           TA+ +  +LE+LY +K ++N+LYLK+Q + L M EGT
Subjt:  GISTAKELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGT

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTCTTTATGAGTCCAGTGAAGATTGACGTGGAGAAATTTGACGGAATGATCAACTTTGGCTTGTGGCAAGTGCAAGTCAAGGATGTGCTGACACAATCTGGGTT
ACACAAGGCGTTGAAGGGAAGACCGAGTGAAGGTGCTTCTAAAAAGCTAAGCGGTGATGGTGGTCCAATGGAGTCTAGTGGTGGTTCCAGCAGAGGTTCTAAGAAGTCTA
GCATGAGTGATGAAGATTGGGAGGAAATGGATTTGAGAGCTGCAAGCGTGATACGAACAAGTTTGGCTAAGAATATTCTTGCGAATGTGCATGGAATTTCAACAGCCAAA
GAACTTTCTGAGAAGCTCGAAGCGTTGTATCAGGCAAAGGGCATCTCAAATCGGCTATACCTGAAGGAGCAGTTTCACACGCTGCGAATGGAAGAAGGTACGAAAATTTC
AGATGAAGGGCGTACTTCACATGAAGATTCGGCACTGGTAGCTAGCAATTGGAAGAAGAAGAAAGACTCCGTACAAAAGAAAGCTTGTTGTTGGGGATGCGGACAGTCTG
GGCACATGAATAAAAATTGTCCCAACAGAGTCGGTTCGTCAAAGGGCTCTAGGCGGGATGCTGACAAGGATGTGATGTTAGCGGTTCCACAAGTTTACACATGGGCATTG
GCTTGGCAGTTATGCAAGGCGTATGTGGTGGAAGTTATGTTGATGGCTGAAGAACTTCCAAGTGAGCCAAGTAGATGTGTAAGCGTGATTGATTCCAAATCTTTAGCAGG
TCTTTCTCACTCTGAGGCGAGTGACTCCATGCAATCGAGGCTCTGGTTGACCTTTTCTCCATCGTTGATCGGAGTTGTCATCCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCATTCTTTATGAGTCCAGTGAAGATTGACGTGGAGAAATTTGACGGAATGATCAACTTTGGCTTGTGGCAAGTGCAAGTCAAGGATGTGCTGACACAATCTGGGTT
ACACAAGGCGTTGAAGGGAAGACCGAGTGAAGGTGCTTCTAAAAAGCTAAGCGGTGATGGTGGTCCAATGGAGTCTAGTGGTGGTTCCAGCAGAGGTTCTAAGAAGTCTA
GCATGAGTGATGAAGATTGGGAGGAAATGGATTTGAGAGCTGCAAGCGTGATACGAACAAGTTTGGCTAAGAATATTCTTGCGAATGTGCATGGAATTTCAACAGCCAAA
GAACTTTCTGAGAAGCTCGAAGCGTTGTATCAGGCAAAGGGCATCTCAAATCGGCTATACCTGAAGGAGCAGTTTCACACGCTGCGAATGGAAGAAGGTACGAAAATTTC
AGATGAAGGGCGTACTTCACATGAAGATTCGGCACTGGTAGCTAGCAATTGGAAGAAGAAGAAAGACTCCGTACAAAAGAAAGCTTGTTGTTGGGGATGCGGACAGTCTG
GGCACATGAATAAAAATTGTCCCAACAGAGTCGGTTCGTCAAAGGGCTCTAGGCGGGATGCTGACAAGGATGTGATGTTAGCGGTTCCACAAGTTTACACATGGGCATTG
GCTTGGCAGTTATGCAAGGCGTATGTGGTGGAAGTTATGTTGATGGCTGAAGAACTTCCAAGTGAGCCAAGTAGATGTGTAAGCGTGATTGATTCCAAATCTTTAGCAGG
TCTTTCTCACTCTGAGGCGAGTGACTCCATGCAATCGAGGCTCTGGTTGACCTTTTCTCCATCGTTGATCGGAGTTGTCATCCACTAG
Protein sequenceShow/hide protein sequence
MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLTQSGLHKALKGRPSEGASKKLSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASVIRTSLAKNILANVHGISTAK
ELSEKLEALYQAKGISNRLYLKEQFHTLRMEEGTKISDEGRTSHEDSALVASNWKKKKDSVQKKACCWGCGQSGHMNKNCPNRVGSSKGSRRDADKDVMLAVPQVYTWAL
AWQLCKAYVVEVMLMAEELPSEPSRCVSVIDSKSLAGLSHSEASDSMQSRLWLTFSPSLIGVVIH