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Moc07g01480 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g01480
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr7:1227005..1227707
RNA-Seq ExpressionMoc07g01480
SyntenyMoc07g01480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]9.8e-2544.38Show/hide
Query:  PPIHFNDYEPVANNGGIDYSLKDHDLRKHLVDKKRKAS--------------------------------------------------------------
        P I   + EP+ N+ G+DYSL+D+DLRKHL DKK+KAS                                                              
Subjt:  PPIHFNDYEPVANNGGIDYSLKDHDLRKHLVDKKRKAS--------------------------------------------------------------

Query:  -----RGESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIKC
              GESPFTSD++EAPIPPKFKTP MK YDG KDPKDYVEVFEGLMDFQAA+DAIKC
Subjt:  -----RGESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIKC

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]2.8e-1990.74Show/hide
Query:  GESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIKC
        GESPFTSD+LEA IPPKFKTP MKSYDG KDPKDYVEVFEGLMDFQAA+DAIKC
Subjt:  GESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIKC

XP_022156542.1 uncharacterized protein LOC111023421 [Momordica charantia]4.7e-1980.65Show/hide
Query:  DKKRKASRGESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIKC
        D       GESPFTSDVLEAPIPPKFK P +K YDG KDPKDYVEVFEGLMDFQAASDAIKC
Subjt:  DKKRKASRGESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIKC

XP_022157897.1 uncharacterized protein LOC111024503 [Momordica charantia]8.0e-1955.45Show/hide
Query:  YEPVANNGGIDYSLKDHDLRKHLVDKKRKASR---------------GESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIK
        Y+P+     I  + ++ DL KH  D++ +A +               GESPFTSD+LE PIPPKFKTP MK YD  KDPKDYVEVFEGLMDFQAA+DAIK
Subjt:  YEPVANNGGIDYSLKDHDLRKHLVDKKRKASR---------------GESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIK

Query:  C
        C
Subjt:  C

XP_022159250.1 uncharacterized protein LOC111025663 [Momordica charantia]1.2e-1990.74Show/hide
Query:  GESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIKC
        GESPFTSD+LEAPIPPKFKTP MK YDG KDPKDYVEVFEGLMDFQAA+DAIKC
Subjt:  GESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIKC

TrEMBL top hitse value%identityAlignment
A0A6J1DPC9 uncharacterized protein LOC1110222804.7e-2544.38Show/hide
Query:  PPIHFNDYEPVANNGGIDYSLKDHDLRKHLVDKKRKAS--------------------------------------------------------------
        P I   + EP+ N+ G+DYSL+D+DLRKHL DKK+KAS                                                              
Subjt:  PPIHFNDYEPVANNGGIDYSLKDHDLRKHLVDKKRKAS--------------------------------------------------------------

Query:  -----RGESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIKC
              GESPFTSD++EAPIPPKFKTP MK YDG KDPKDYVEVFEGLMDFQAA+DAIKC
Subjt:  -----RGESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIKC

A0A6J1DPN4 uncharacterized protein LOC1110230601.3e-1990.74Show/hide
Query:  GESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIKC
        GESPFTSD+LEA IPPKFKTP MKSYDG KDPKDYVEVFEGLMDFQAA+DAIKC
Subjt:  GESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIKC

A0A6J1DS95 uncharacterized protein LOC1110234212.3e-1980.65Show/hide
Query:  DKKRKASRGESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIKC
        D       GESPFTSDVLEAPIPPKFK P +K YDG KDPKDYVEVFEGLMDFQAASDAIKC
Subjt:  DKKRKASRGESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIKC

A0A6J1DVR0 uncharacterized protein LOC1110245033.9e-1955.45Show/hide
Query:  YEPVANNGGIDYSLKDHDLRKHLVDKKRKASR---------------GESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIK
        Y+P+     I  + ++ DL KH  D++ +A +               GESPFTSD+LE PIPPKFKTP MK YD  KDPKDYVEVFEGLMDFQAA+DAIK
Subjt:  YEPVANNGGIDYSLKDHDLRKHLVDKKRKASR---------------GESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIK

Query:  C
        C
Subjt:  C

A0A6J1DY58 uncharacterized protein LOC1110256636.0e-2090.74Show/hide
Query:  GESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIKC
        GESPFTSD+LEAPIPPKFKTP MK YDG KDPKDYVEVFEGLMDFQAA+DAIKC
Subjt:  GESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIKC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTTGCGGCAGGGCAAGAAGTGGAGCCAGCTCGGATGTCCACCCGCAACTCCAACACCGTCTTGCCCCCAACACACCCGAGGCCCAGCAAGACCAACCGAGGTCGA
GGTGAGACCTCAAAAAATATTTCTCGAAGGGCCGCGTCCAGCTGCGGACCCTGAGGTTCTTGCTACTCCCCAGCGGGAGTTAGATGATATGTGCAACCGAGCGGGGCAGA
CGACCTGCCAGAATTTAGAGATGACTAAGATCCCCCCCATCCACTTCAATGACTATGAGCCCGTCGCCAACAACGGAGGGATCGACTATAGTTTGAAGGATCACGACCTT
CGGAAGCACCTCGTCGATAAGAAAAGGAAGGCCTCACGAGGTGAATCACCATTCACCTCGGATGTCTTGGAGGCCCCAATCCCTCCAAAGTTCAAAACGCCTGCCATGAA
GTCCTACGATGGGTATAAGGACCCAAAGGATTACGTGGAGGTCTTTGAAGGCCTTATGGACTTCCAAGCGGCGTCTGACGCCATCAAGTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTTGCGGCAGGGCAAGAAGTGGAGCCAGCTCGGATGTCCACCCGCAACTCCAACACCGTCTTGCCCCCAACACACCCGAGGCCCAGCAAGACCAACCGAGGTCGA
GGTGAGACCTCAAAAAATATTTCTCGAAGGGCCGCGTCCAGCTGCGGACCCTGAGGTTCTTGCTACTCCCCAGCGGGAGTTAGATGATATGTGCAACCGAGCGGGGCAGA
CGACCTGCCAGAATTTAGAGATGACTAAGATCCCCCCCATCCACTTCAATGACTATGAGCCCGTCGCCAACAACGGAGGGATCGACTATAGTTTGAAGGATCACGACCTT
CGGAAGCACCTCGTCGATAAGAAAAGGAAGGCCTCACGAGGTGAATCACCATTCACCTCGGATGTCTTGGAGGCCCCAATCCCTCCAAAGTTCAAAACGCCTGCCATGAA
GTCCTACGATGGGTATAAGGACCCAAAGGATTACGTGGAGGTCTTTGAAGGCCTTATGGACTTCCAAGCGGCGTCTGACGCCATCAAGTGCTGA
Protein sequenceShow/hide protein sequence
MLLRQGKKWSQLGCPPATPTPSCPQHTRGPARPTEVEVRPQKIFLEGPRPAADPEVLATPQRELDDMCNRAGQTTCQNLEMTKIPPIHFNDYEPVANNGGIDYSLKDHDL
RKHLVDKKRKASRGESPFTSDVLEAPIPPKFKTPAMKSYDGYKDPKDYVEVFEGLMDFQAASDAIKC