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Moc07g01500 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g01500
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr7:1228926..1231714
RNA-Seq ExpressionMoc07g01500
SyntenyMoc07g01500
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149378.1 uncharacterized protein LOC111017809 [Momordica charantia]3.5e-4665.16Show/hide
Query:  MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPM
        MAEFV ID RSAYNAIFGRP+IHSLRA+P+TLHQ +KYST NGVG++RGEQ+ S +CY SALKG +VCAL+E       +   S+ +LP+  +RE  A  
Subjt:  MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPM

Query:  EELELVSLLSQEKQVSIGTKLGAVNREELISFLKANSDVFTWSHEDMLGIDLKIM
        EELELV LLS E+QVSIGTKLGA +REE I+FL+ NS+VF WSHE+M GID KIM
Subjt:  EELELVSLLSQEKQVSIGTKLGAVNREELISFLKANSDVFTWSHEDMLGIDLKIM

XP_022149985.1 uncharacterized protein LOC111018267 [Momordica charantia]2.1e-5170.97Show/hide
Query:  MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPM
        MAEFV I+GRSAYNAIFGRPIIHS +A+P+TLHQV+KYST NGVG IRGEQKTS +CY S LKGS+VCAL+E  N        SE +LP+  +RE +AP+
Subjt:  MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPM

Query:  EELELVSLLSQEKQVSIGTKLGAVNREELISFLKANSDVFTWSHEDMLGIDLKIM
        EELELV LLS E+QVSI TKLGA +REELI+FL++NSDVF WSHEDM GIDLKIM
Subjt:  EELELVSLLSQEKQVSIGTKLGAVNREELISFLKANSDVFTWSHEDMLGIDLKIM

XP_022154846.1 uncharacterized protein LOC111022006 [Momordica charantia]2.7e-4667.55Show/hide
Query:  MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPM
        MAEFV ID +SAYNAIFGRPIIHS  A+ +TLHQV+KYST NGVG +RGEQKTS KCY S LKG AVC L+E TN      Q SE +LP+ S+R+ + P 
Subjt:  MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPM

Query:  EELELVSLLSQEKQVSIGTKLGAVNREELISFLKANSDVFTWSHEDMLGID
        EELELV LLS EK V+IGTKL A +R+ELI+FL++NSDVF WSHEDM GID
Subjt:  EELELVSLLSQEKQVSIGTKLGAVNREELISFLKANSDVFTWSHEDMLGID

XP_022158414.1 uncharacterized protein LOC111024904 [Momordica charantia]5.8e-3368.97Show/hide
Query:  MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPM
        MAEFV IDGRSAYNAIFGRPIIHS RA+P+TLHQV+KYST N VGM+RGEQKTS +CY SALKGSAVCAL+E TN      Q SE +LP+  +R+   P 
Subjt:  MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPM

Query:  EELELVSLLSQEKQVS
        EELELV LLS E+Q +
Subjt:  EELELVSLLSQEKQVS

XP_022159205.1 uncharacterized protein LOC111025624 [Momordica charantia]1.8e-3452.94Show/hide
Query:  MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPM
        +AEFV ID  S YNAI GRP+I  LRA+P+T HQV+KY T  G+  +RGEQK S +CY +A+KG+  CA   +T    P A    DE P  S+     P 
Subjt:  MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPM

Query:  EELELVSLLSQEKQVSIGTKLGAVNREELISFLKANSDVFTWSHEDMLGIDLKIMESNRYTALHKSKDDP
        EELELV LL  EKQVSIG++L A  +EEL+SFLKAN+DVF WSH+DM GID  IM       +H+   DP
Subjt:  EELELVSLLSQEKQVSIGTKLGAVNREELISFLKANSDVFTWSHEDMLGIDLKIMESNRYTALHKSKDDP

TrEMBL top hitse value%identityAlignment
A0A6J1D6M1 Ribonuclease H1.7e-4665.16Show/hide
Query:  MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPM
        MAEFV ID RSAYNAIFGRP+IHSLRA+P+TLHQ +KYST NGVG++RGEQ+ S +CY SALKG +VCAL+E       +   S+ +LP+  +RE  A  
Subjt:  MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPM

Query:  EELELVSLLSQEKQVSIGTKLGAVNREELISFLKANSDVFTWSHEDMLGIDLKIM
        EELELV LLS E+QVSIGTKLGA +REE I+FL+ NS+VF WSHE+M GID KIM
Subjt:  EELELVSLLSQEKQVSIGTKLGAVNREELISFLKANSDVFTWSHEDMLGIDLKIM

A0A6J1D787 uncharacterized protein LOC1110182671.0e-5170.97Show/hide
Query:  MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPM
        MAEFV I+GRSAYNAIFGRPIIHS +A+P+TLHQV+KYST NGVG IRGEQKTS +CY S LKGS+VCAL+E  N        SE +LP+  +RE +AP+
Subjt:  MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPM

Query:  EELELVSLLSQEKQVSIGTKLGAVNREELISFLKANSDVFTWSHEDMLGIDLKIM
        EELELV LLS E+QVSI TKLGA +REELI+FL++NSDVF WSHEDM GIDLKIM
Subjt:  EELELVSLLSQEKQVSIGTKLGAVNREELISFLKANSDVFTWSHEDMLGIDLKIM

A0A6J1DPX9 uncharacterized protein LOC1110220061.3e-4667.55Show/hide
Query:  MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPM
        MAEFV ID +SAYNAIFGRPIIHS  A+ +TLHQV+KYST NGVG +RGEQKTS KCY S LKG AVC L+E TN      Q SE +LP+ S+R+ + P 
Subjt:  MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPM

Query:  EELELVSLLSQEKQVSIGTKLGAVNREELISFLKANSDVFTWSHEDMLGID
        EELELV LLS EK V+IGTKL A +R+ELI+FL++NSDVF WSHEDM GID
Subjt:  EELELVSLLSQEKQVSIGTKLGAVNREELISFLKANSDVFTWSHEDMLGID

A0A6J1DY08 uncharacterized protein LOC1110256248.8e-3552.94Show/hide
Query:  MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPM
        +AEFV ID  S YNAI GRP+I  LRA+P+T HQV+KY T  G+  +RGEQK S +CY +A+KG+  CA   +T    P A    DE P  S+     P 
Subjt:  MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPM

Query:  EELELVSLLSQEKQVSIGTKLGAVNREELISFLKANSDVFTWSHEDMLGIDLKIMESNRYTALHKSKDDP
        EELELV LL  EKQVSIG++L A  +EEL+SFLKAN+DVF WSH+DM GID  IM       +H+   DP
Subjt:  EELELVSLLSQEKQVSIGTKLGAVNREELISFLKANSDVFTWSHEDMLGIDLKIMESNRYTALHKSKDDP

A0A6J1DZB9 uncharacterized protein LOC1110249042.8e-3368.97Show/hide
Query:  MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPM
        MAEFV IDGRSAYNAIFGRPIIHS RA+P+TLHQV+KYST N VGM+RGEQKTS +CY SALKGSAVCAL+E TN      Q SE +LP+  +R+   P 
Subjt:  MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPM

Query:  EELELVSLLSQEKQVS
        EELELV LLS E+Q +
Subjt:  EELELVSLLSQEKQVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGTTCGTGGATATAGACGGCAGATCGGCCTACAATGCCATCTTCGGGCGACCCATTATCCACTCACTTCGGGCTATTCCTGCAACTCTGCACCAGGTC
ATGAAGTATTCTACAGTCAATGGGGTCGGCATGATCCGAGGAGAGCAGAAAACGTCCCACAAGTGCTATACCTCTGCACTAAAGGGATCAGCAGTTTGCGCCCTG
AAGGAATTGACAAATCTTCTAAGTCCAATAGCTCAAGCTTCCGAGGACGAGCTGCCCAGAACTAGCCAGCGAGAAGTGGCTGCGCCTATGGAGGAGTTGGAGCTT
GTCTCTTTACTCAGTCAAGAAAAGCAAGTGAGCATAGGCACGAAGCTGGGGGCCGTGAACAGAGAAGAGCTAATCTCATTCCTCAAGGCGAACTCAGACGTGTTC
ACATGGTCTCATGAGGACATGTTGGGCATAGATTTGAAGATTATGGAGTCAAACCGGTACACTGCTCTTCACAAGAGCAAAGACGATCCTCTCCACGGTGAGGAT
CACACCGTTACAATGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAGTTCGTGGATATAGACGGCAGATCGGCCTACAATGCCATCTTCGGGCGACCCATTATCCACTCACTTCGGGCTATTCCTGCAACTCTGCACCAGGTC
ATGAAGTATTCTACAGTCAATGGGGTCGGCATGATCCGAGGAGAGCAGAAAACGTCCCACAAGTGCTATACCTCTGCACTAAAGGGATCAGCAGTTTGCGCCCTG
AAGGAATTGACAAATCTTCTAAGTCCAATAGCTCAAGCTTCCGAGGACGAGCTGCCCAGAACTAGCCAGCGAGAAGTGGCTGCGCCTATGGAGGAGTTGGAGCTT
GTCTCTTTACTCAGTCAAGAAAAGCAAGTGAGCATAGGCACGAAGCTGGGGGCCGTGAACAGAGAAGAGCTAATCTCATTCCTCAAGGCGAACTCAGACGTGTTC
ACATGGTCTCATGAGGACATGTTGGGCATAGATTTGAAGATTATGGAGTCAAACCGGTACACTGCTCTTCACAAGAGCAAAGACGATCCTCTCCACGGTGAGGAT
CACACCGTTACAATGAGTTGA
Protein sequenceShow/hide protein sequence
MAEFVDIDGRSAYNAIFGRPIIHSLRAIPATLHQVMKYSTVNGVGMIRGEQKTSHKCYTSALKGSAVCALKELTNLLSPIAQASEDELPRTSQREVAAPMEELEL
VSLLSQEKQVSIGTKLGAVNREELISFLKANSDVFTWSHEDMLGIDLKIMESNRYTALHKSKDDPLHGEDHTVTMS