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Moc07g01660 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g01660
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRNA-directed DNA polymerase
Genome locationchr7:1313967..1314422
RNA-Seq ExpressionMoc07g01660
SyntenyMoc07g01660
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0043167 - ion binding (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PKU71093.1 ATP-dependent DNA helicase RecG [Dendrobium catenatum]1.4e-2454.72Show/hide
Query:  TVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAYHPPDAAMTIE
        TV+ NLQ++N +Y ++AD  RR K F +GDLVM  +RRER+P G+YSKL PRK+GP+ I+  I++NAYVI+LP E+ TS TFNV+DL++Y PPD+ + + 
Subjt:  TVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAYHPPDAAMTIE

Query:  EDGESS
           ESS
Subjt:  EDGESS

PKU75011.1 ATP-dependent DNA helicase RecG [Dendrobium catenatum]5.2e-2757.01Show/hide
Query:  DTVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAYHPPDAAMTI
        ++V+ NLQ +N +Y +R+D++RR K F +G+LVM  +RRER+P G+YSKL PRKIGP+ I   I++NAYVI+LP +IHTS TFNVAD+++YH PD+A  I
Subjt:  DTVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAYHPPDAAMTI

Query:  EEDGESS
        E   ESS
Subjt:  EEDGESS

PKU83407.1 RNA-directed DNA polymerase [Dendrobium catenatum]2.4e-2451.3Show/hide
Query:  DEMIHIRDTVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAYHP
        D+  +I D V   L ++N +Y E+AD  +R K FE GDLVM  +R+ER P+G+Y+KL PRKIGP+ +++ I++NAYVI+LP E+HTS TFNV+D+ +YHP
Subjt:  DEMIHIRDTVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAYHP

Query:  PDAAMTIEEDGESSA
        PD A T+    E+S+
Subjt:  PDAAMTIEEDGESSA

PKU86669.1 RNA-directed DNA polymerase [Dendrobium catenatum]6.8e-2760.38Show/hide
Query:  TVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAYHPPDAAMTIE
        TV+ NL +AN +Y   AD  RR KIF  G+LVM  +RRERHP G+YSKL PRKIGP+ I   I++NAYVI+LP +IHTSPTFNV+D+++YHPPD    IE
Subjt:  TVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAYHPPDAAMTIE

Query:  EDGESS
           ESS
Subjt:  EDGESS

XP_030949114.1 uncharacterized protein LOC115973016 [Quercus lobata]1.9e-2455.77Show/hide
Query:  MTDEMIHIRDTVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAY
        MT+ +  +++ V+  L+  NA+Y E ADKKRREKIF IGDLV+ YLR+E  P+G+Y+KLK +K GP++I K I++NAYV+ LP +I  S TFNVADL+ Y
Subjt:  MTDEMIHIRDTVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAY

Query:  HPPD
        HP D
Subjt:  HPPD

TrEMBL top hitse value%identityAlignment
A0A2I0VFC5 Uncharacterized protein1.5e-2450.42Show/hide
Query:  TDEMIHIRDTVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAYH
        T +   + + V+  L ++NA+Y E+ADK RRE+ F+ GDLVM  +RRER P G+YSKL  RKIGPY ++K I+ NAYVI+LP+  +T+ TFN+ DL AYH
Subjt:  TDEMIHIRDTVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAYH

Query:  PPDAAMTIEEDGESSAFID
        PPD A+T     +S + +D
Subjt:  PPDAAMTIEEDGESSAFID

A0A2I0W607 ATP-dependent DNA helicase RecG6.9e-2554.72Show/hide
Query:  TVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAYHPPDAAMTIE
        TV+ NLQ++N +Y ++AD  RR K F +GDLVM  +RRER+P G+YSKL PRK+GP+ I+  I++NAYVI+LP E+ TS TFNV+DL++Y PPD+ + + 
Subjt:  TVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAYHPPDAAMTIE

Query:  EDGESS
           ESS
Subjt:  EDGESS

A0A2I0WH88 ATP-dependent DNA helicase RecG2.5e-2757.01Show/hide
Query:  DTVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAYHPPDAAMTI
        ++V+ NLQ +N +Y +R+D++RR K F +G+LVM  +RRER+P G+YSKL PRKIGP+ I   I++NAYVI+LP +IHTS TFNVAD+++YH PD+A  I
Subjt:  DTVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAYHPPDAAMTI

Query:  EEDGESS
        E   ESS
Subjt:  EEDGESS

A0A2I0X674 RNA-directed DNA polymerase1.2e-2451.3Show/hide
Query:  DEMIHIRDTVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAYHP
        D+  +I D V   L ++N +Y E+AD  +R K FE GDLVM  +R+ER P+G+Y+KL PRKIGP+ +++ I++NAYVI+LP E+HTS TFNV+D+ +YHP
Subjt:  DEMIHIRDTVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAYHP

Query:  PDAAMTIEEDGESSA
        PD A T+    E+S+
Subjt:  PDAAMTIEEDGESSA

A0A2I0XFK1 RNA-directed DNA polymerase3.3e-2760.38Show/hide
Query:  TVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAYHPPDAAMTIE
        TV+ NL +AN +Y   AD  RR KIF  G+LVM  +RRERHP G+YSKL PRKIGP+ I   I++NAYVI+LP +IHTSPTFNV+D+++YHPPD    IE
Subjt:  TVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAYHPPDAAMTIE

Query:  EDGESS
           ESS
Subjt:  EDGESS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGATGAAATGATACACATCCGAGATACTGTTCAACATAATCTTCAGCAAGCAAATGCACAGTACATAGAGCGAGCCGACAAGAAACGAAGGGAGAAAATATTTGA
GATTGGAGATCTCGTCATGGCTTACCTTCGACGTGAGAGACACCCAATTGGTTCATATTCGAAGTTGAAACCCCGCAAAATTGGTCCCTACAAAATTGTAAAAAATATAA
GCAACAACGCTTATGTTATCGAGCTACCACAGGAAATACACACGTCACCTACCTTCAATGTCGCCGATCTATTCGCCTATCACCCGCCGGATGCTGCCATGACAATCGAA
GAAGACGGTGAAAGTTCGGCATTCATTGACGAACCCCATACTGCCGCACCATACGCCGCTTACATGACAGCCGCCCTAGATGAAGATCCGACGCCGGAGGAGGCCATGCA
GTTGTGGAAGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAGATGAAATGATACACATCCGAGATACTGTTCAACATAATCTTCAGCAAGCAAATGCACAGTACATAGAGCGAGCCGACAAGAAACGAAGGGAGAAAATATTTGA
GATTGGAGATCTCGTCATGGCTTACCTTCGACGTGAGAGACACCCAATTGGTTCATATTCGAAGTTGAAACCCCGCAAAATTGGTCCCTACAAAATTGTAAAAAATATAA
GCAACAACGCTTATGTTATCGAGCTACCACAGGAAATACACACGTCACCTACCTTCAATGTCGCCGATCTATTCGCCTATCACCCGCCGGATGCTGCCATGACAATCGAA
GAAGACGGTGAAAGTTCGGCATTCATTGACGAACCCCATACTGCCGCACCATACGCCGCTTACATGACAGCCGCCCTAGATGAAGATCCGACGCCGGAGGAGGCCATGCA
GTTGTGGAAGATTTAG
Protein sequenceShow/hide protein sequence
MTDEMIHIRDTVQHNLQQANAQYIERADKKRREKIFEIGDLVMAYLRRERHPIGSYSKLKPRKIGPYKIVKNISNNAYVIELPQEIHTSPTFNVADLFAYHPPDAAMTIE
EDGESSAFIDEPHTAAPYAAYMTAALDEDPTPEEAMQLWKI