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Moc07g01800 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g01800
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr7:1387606..1391916
RNA-Seq ExpressionMoc07g01800
SyntenyMoc07g01800
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136647.1 uncharacterized protein LOC111008302 [Momordica charantia]7.2e-3690.91Show/hide
Query:  SKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQDPKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLK
        ++SVPVEILDNPSISEPDLMEIG PESSWMDPIA+FIRGNSPQDPKERRKLARRAARFVVRG ALYRRGFSLPLLRCLTPEEGL  L+
Subjt:  SKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQDPKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLK

XP_022142324.1 uncharacterized protein LOC111012466 [Momordica charantia]2.8e-3583.87Show/hide
Query:  YLVPRSKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQDPKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLK
        Y    ++SVP+EILDNPSISEPDLMEIG PESSWMDPIA+FIRGNSPQDP E RKLARRAARFVVRGGALYRRGFSLPLLRCLTP+EGL  L+
Subjt:  YLVPRSKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQDPKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLK

XP_022143486.1 uncharacterized protein LOC111013362 [Momordica charantia]3.2e-3687.1Show/hide
Query:  YLVPRSKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQDPKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLK
        Y    ++SVPVEILDNPSISEPDLMEIG PESSWMDPIA+FIRGNSPQDPKERRKLARRAARFVVR GALYRRGFSLPLLRCLTPEEGL  L+
Subjt:  YLVPRSKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQDPKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLK

XP_022158219.1 protein NYNRIN-like [Momordica charantia]1.7e-4044.9Show/hide
Query:  YLVPRSKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQDPKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLKSKRCEVT
        Y    ++SVPVEILDNPSISEPDLMEIG PESSWMDPIA+FIRGNSPQDPKERRKLA R ARFVVR GALYRRGFSLPLLRCLTPEEGL  L+     V 
Subjt:  YLVPRSKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQDPKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLKSKRCEVT

Query:  LAAVQRKSKERKDVANNKLCPDTYKQKTKEKRRKTAKSLLKGGRLRACLRSALLN----------GADLI-LFEVGVVRVQISDVLIHQ-----------
              +S   K +      P T  Q  K K  +T  +  + G +       L            G D+I  F +G  + + + V +             
Subjt:  LAAVQRKSKERKDVANNKLCPDTYKQKTKEKRRKTAKSLLKGGRLRACLRSALLN----------GADLI-LFEVGVVRVQISDVLIHQ-----------

Query:  -----------------RLGAKGAA-------------RPRRPLLSIPLLQTTEIDLKVRHVGSNALHEKLEARVREVFGKSIEVRMLPKQFLQ
                         R G   A              +     L I  L+++      RHVGS ALHEKLEARVR++FGKSIEVRMLP++FLQ
Subjt:  -----------------RLGAKGAA-------------RPRRPLLSIPLLQTTEIDLKVRHVGSNALHEKLEARVREVFGKSIEVRMLPKQFLQ

XP_022158520.1 uncharacterized protein LOC111024991 [Momordica charantia]6.1e-3581.72Show/hide
Query:  YLVPRSKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQDPKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLK
        Y    ++SVPVEILDNPSI EPDLMEIG PESSWM+PI +FI+GNSPQDPKERRKLARRAARFV+R GALYRRGFSLPLL+CLTPEEGL+D K
Subjt:  YLVPRSKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQDPKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLK

TrEMBL top hitse value%identityAlignment
A0A6J1C617 Ribonuclease H3.5e-3690.91Show/hide
Query:  SKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQDPKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLK
        ++SVPVEILDNPSISEPDLMEIG PESSWMDPIA+FIRGNSPQDPKERRKLARRAARFVVRG ALYRRGFSLPLLRCLTPEEGL  L+
Subjt:  SKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQDPKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLK

A0A6J1CL97 uncharacterized protein LOC1110124661.3e-3583.87Show/hide
Query:  YLVPRSKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQDPKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLK
        Y    ++SVP+EILDNPSISEPDLMEIG PESSWMDPIA+FIRGNSPQDP E RKLARRAARFVVRGGALYRRGFSLPLLRCLTP+EGL  L+
Subjt:  YLVPRSKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQDPKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLK

A0A6J1CQD7 Ribonuclease H1.6e-3687.1Show/hide
Query:  YLVPRSKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQDPKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLK
        Y    ++SVPVEILDNPSISEPDLMEIG PESSWMDPIA+FIRGNSPQDPKERRKLARRAARFVVR GALYRRGFSLPLLRCLTPEEGL  L+
Subjt:  YLVPRSKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQDPKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLK

A0A6J1DW30 Ribonuclease H3.0e-3581.72Show/hide
Query:  YLVPRSKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQDPKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLK
        Y    ++SVPVEILDNPSI EPDLMEIG PESSWM+PI +FI+GNSPQDPKERRKLARRAARFV+R GALYRRGFSLPLL+CLTPEEGL+D K
Subjt:  YLVPRSKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQDPKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLK

A0A6J1DYS0 Ribonuclease H8.1e-4144.9Show/hide
Query:  YLVPRSKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQDPKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLKSKRCEVT
        Y    ++SVPVEILDNPSISEPDLMEIG PESSWMDPIA+FIRGNSPQDPKERRKLA R ARFVVR GALYRRGFSLPLLRCLTPEEGL  L+     V 
Subjt:  YLVPRSKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQDPKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLKSKRCEVT

Query:  LAAVQRKSKERKDVANNKLCPDTYKQKTKEKRRKTAKSLLKGGRLRACLRSALLN----------GADLI-LFEVGVVRVQISDVLIHQ-----------
              +S   K +      P T  Q  K K  +T  +  + G +       L            G D+I  F +G  + + + V +             
Subjt:  LAAVQRKSKERKDVANNKLCPDTYKQKTKEKRRKTAKSLLKGGRLRACLRSALLN----------GADLI-LFEVGVVRVQISDVLIHQ-----------

Query:  -----------------RLGAKGAA-------------RPRRPLLSIPLLQTTEIDLKVRHVGSNALHEKLEARVREVFGKSIEVRMLPKQFLQ
                         R G   A              +     L I  L+++      RHVGS ALHEKLEARVR++FGKSIEVRMLP++FLQ
Subjt:  -----------------RLGAKGAA-------------RPRRPLLSIPLLQTTEIDLKVRHVGSNALHEKLEARVREVFGKSIEVRMLPKQFLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTGGGCACGGTCCGAGGAGAACAGACCGCTTCGAGGGAGTGTTATGCCTCCGCACTCAAAAGCTCATCGGTCTGCGCCCTCGAAACTCTCGCCGGTAGGGATGGG
ACGCTCGAGTTCGAGGCCGACCTGCCGAGGAGGGAGTTTGCCGCACCCACTGAGGAGCTCGAGCTTGTTCCTCTACTTAGTCCCGAGAAGCAAGTCGGTCCCCGTCGAGA
TCTTAGATAATCCCTCGATCTCAGAGCCAGATCTGATGGAGATCGGCACTCCAGAGTCCTCATGGATGGACCCGATTGCGAACTTCATTAGGGGCAACTCACCACAAGAC
CCCAAGGAGCGCAGAAAGTTGGCAAGGCGAGCAGCTCGGTTCGTGGTCCGAGGTGGAGCATTGTACCGACGCGGCTTTTCCCTGCCTCTATTGAGATGCCTAACCCCTGA
AGAGGGCCTGCGCGACCTCAAAAGTAAGAGGTGCGAGGTGACATTGGCTGCAGTTCAAAGAAAAAGCAAAGAAAGGAAAGATGTTGCCAACAACAAACTCTGCCCTGACA
CTTACAAACAAAAAACAAAAGAGAAGAGAAGAAAGACAGCGAAAAGCCTTTTGAAGGGTGGTCGCCTAAGAGCCTGCTTGAGGAGCGCCCTCTTGAATGGTGCCGACCTG
ATCCTCTTCGAGGTCGGAGTAGTCAGAGTCCAGATCTCTGACGTACTTATCCACCAACGCTTAGGGGCCAAGGGTGCCGCTAGGCCTAGACGCCCACTGCTCAGCATACC
TCTTCTTCAGACCACCGAGATCGATCTGAAGGTCAGGCATGTCGGAAGCAATGCCCTTCATGAGAAACTTGAAGCCCGCGTCAGAGAAGTCTTTGGCAAATCCATCGAAG
TCAGGATGTTGCCTAAACAATTCCTCCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGTGGGCACGGTCCGAGGAGAACAGACCGCTTCGAGGGAGTGTTATGCCTCCGCACTCAAAAGCTCATCGGTCTGCGCCCTCGAAACTCTCGCCGGTAGGGATGGG
ACGCTCGAGTTCGAGGCCGACCTGCCGAGGAGGGAGTTTGCCGCACCCACTGAGGAGCTCGAGCTTGTTCCTCTACTTAGTCCCGAGAAGCAAGTCGGTCCCCGTCGAGA
TCTTAGATAATCCCTCGATCTCAGAGCCAGATCTGATGGAGATCGGCACTCCAGAGTCCTCATGGATGGACCCGATTGCGAACTTCATTAGGGGCAACTCACCACAAGAC
CCCAAGGAGCGCAGAAAGTTGGCAAGGCGAGCAGCTCGGTTCGTGGTCCGAGGTGGAGCATTGTACCGACGCGGCTTTTCCCTGCCTCTATTGAGATGCCTAACCCCTGA
AGAGGGCCTGCGCGACCTCAAAAGTAAGAGGTGCGAGGTGACATTGGCTGCAGTTCAAAGAAAAAGCAAAGAAAGGAAAGATGTTGCCAACAACAAACTCTGCCCTGACA
CTTACAAACAAAAAACAAAAGAGAAGAGAAGAAAGACAGCGAAAAGCCTTTTGAAGGGTGGTCGCCTAAGAGCCTGCTTGAGGAGCGCCCTCTTGAATGGTGCCGACCTG
ATCCTCTTCGAGGTCGGAGTAGTCAGAGTCCAGATCTCTGACGTACTTATCCACCAACGCTTAGGGGCCAAGGGTGCCGCTAGGCCTAGACGCCCACTGCTCAGCATACC
TCTTCTTCAGACCACCGAGATCGATCTGAAGGTCAGGCATGTCGGAAGCAATGCCCTTCATGAGAAACTTGAAGCCCGCGTCAGAGAAGTCTTTGGCAAATCCATCGAAG
TCAGGATGTTGCCTAAACAATTCCTCCAATAG
Protein sequenceShow/hide protein sequence
MVWARSEENRPLRGSVMPPHSKAHRSAPSKLSPVGMGRSSSRPTCRGGSLPHPLRSSSLFLYLVPRSKSVPVEILDNPSISEPDLMEIGTPESSWMDPIANFIRGNSPQD
PKERRKLARRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRDLKSKRCEVTLAAVQRKSKERKDVANNKLCPDTYKQKTKEKRRKTAKSLLKGGRLRACLRSALLNGADL
ILFEVGVVRVQISDVLIHQRLGAKGAARPRRPLLSIPLLQTTEIDLKVRHVGSNALHEKLEARVREVFGKSIEVRMLPKQFLQ