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Moc07g01880 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g01880
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr7:1448123..1461357
RNA-Seq ExpressionMoc07g01880
SyntenyMoc07g01880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156048.1 uncharacterized protein LOC111023016 [Momordica charantia]2.7e-0963.49Show/hide
Query:  ESDSSLNEATDLSGEARPSPSHQLNSTTHDKAKPAEEVEFVPLTAEDRRVNIGTSFSLHEGSS
        E  + LN+ATDLSGEARPSP H+LNSTT D+   AEEVE VPLT E++RVNIGT     E  S
Subjt:  ESDSSLNEATDLSGEARPSPSHQLNSTTHDKAKPAEEVEFVPLTAEDRRVNIGTSFSLHEGSS

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]4.1e-2151.47Show/hide
Query:  MNPGESHQRLEKKSLDEAVDHSGEARLSPDHRLNPTTLDRRESDSSLN--------------------------------EATDLSGEARPSPSHQLNST
        MNP ESH+  E+KSL +A DH  EAR SPD +LNPTTLD  E  S LN                                +ATDLSG+ARPSP H+LNST
Subjt:  MNPGESHQRLEKKSLDEAVDHSGEARLSPDHRLNPTTLDRRESDSSLN--------------------------------EATDLSGEARPSPSHQLNST

Query:  THDKAKPAEEVEFVPLTAEDRRVNIGTSFSLHEGSS
        T D+ +PAEEVE VPLTAEDRRVNIGT     E  S
Subjt:  THDKAKPAEEVEFVPLTAEDRRVNIGTSFSLHEGSS

XP_022158042.1 uncharacterized protein LOC111024621 [Momordica charantia]1.7e-0639.5Show/hide
Query:  NPGESHQRLEKKSLDEAVDHSGEARLSPDHRLNPTTLDRRESDSSL--------NEATDLSGEARPSPSHQLNSTTHDKAKPAEEVEFVPLTAEDRRVNI
        NP E  Q  E++SL+ A +  GE   SPDH+ NPTT D+ E    +        + A D  GE   SP    + T  D+ +P +EVE +PLT++DRRVNI
Subjt:  NPGESHQRLEKKSLDEAVDHSGEARLSPDHRLNPTTLDRRESDSSL--------NEATDLSGEARPSPSHQLNSTTHDKAKPAEEVEFVPLTAEDRRVNI

Query:  GTSFSLHEGSSKSSALSLF
        GT      G+ K ++L  F
Subjt:  GTSFSLHEGSSKSSALSLF

TrEMBL top hitse value%identityAlignment
A0A6J1DPJ5 uncharacterized protein LOC1110230161.3e-0963.49Show/hide
Query:  ESDSSLNEATDLSGEARPSPSHQLNSTTHDKAKPAEEVEFVPLTAEDRRVNIGTSFSLHEGSS
        E  + LN+ATDLSGEARPSP H+LNSTT D+   AEEVE VPLT E++RVNIGT     E  S
Subjt:  ESDSSLNEATDLSGEARPSPSHQLNSTTHDKAKPAEEVEFVPLTAEDRRVNIGTSFSLHEGSS

A0A6J1DVC6 Ribonuclease H2.0e-2151.47Show/hide
Query:  MNPGESHQRLEKKSLDEAVDHSGEARLSPDHRLNPTTLDRRESDSSLN--------------------------------EATDLSGEARPSPSHQLNST
        MNP ESH+  E+KSL +A DH  EAR SPD +LNPTTLD  E  S LN                                +ATDLSG+ARPSP H+LNST
Subjt:  MNPGESHQRLEKKSLDEAVDHSGEARLSPDHRLNPTTLDRRESDSSLN--------------------------------EATDLSGEARPSPSHQLNST

Query:  THDKAKPAEEVEFVPLTAEDRRVNIGTSFSLHEGSS
        T D+ +PAEEVE VPLTAEDRRVNIGT     E  S
Subjt:  THDKAKPAEEVEFVPLTAEDRRVNIGTSFSLHEGSS

A0A6J1DW49 uncharacterized protein LOC1110246218.0e-0739.5Show/hide
Query:  NPGESHQRLEKKSLDEAVDHSGEARLSPDHRLNPTTLDRRESDSSL--------NEATDLSGEARPSPSHQLNSTTHDKAKPAEEVEFVPLTAEDRRVNI
        NP E  Q  E++SL+ A +  GE   SPDH+ NPTT D+ E    +        + A D  GE   SP    + T  D+ +P +EVE +PLT++DRRVNI
Subjt:  NPGESHQRLEKKSLDEAVDHSGEARLSPDHRLNPTTLDRRESDSSL--------NEATDLSGEARPSPSHQLNSTTHDKAKPAEEVEFVPLTAEDRRVNI

Query:  GTSFSLHEGSSKSSALSLF
        GT      G+ K ++L  F
Subjt:  GTSFSLHEGSSKSSALSLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCTGGTGAGAGCCATCAGCGTCTCGAAAAGAAGAGCCTGGATGAAGCGGTTGACCACTCGGGTGAGGCAAGACTGAGCCCTGATCATCGACTTAATCCAACCAC
CCTTGACAGGAGAGAATCGGATTCGAGCCTGAATGAAGCGACCGACCTCTCGGGTGAGGCAAGGCCGAGCCCTAGTCATCAACTTAATTCGACCACCCATGACAAGGCAA
AACCGGCCGAGGAGGTAGAATTTGTCCCTCTGACAGCCGAAGATCGACGAGTCAACATTGGAACCAGTTTCTCGCTTCACGAAGGATCTTCGAAGTCTTCAGCTTTGAGT
TTGTTTGAAGACTTGGACTTGTTGATGAAGTTCTTTGGCTTCTTGTTGAAGTTCTTCGGCTTTGTAGCTTGTGAAATTCTTTGGCTTTGCAGATTGCGCTCGCTGAGGAG
GAGACGACACCGGTCTGGGATTGAGGCGTCACTTGGCAGAAGAAGAAGAAGCGTGATGGCATGGGTACCGACCGTTCGTTGCCCAAGAAAGAGACAGGATGGGTCTGGTT
GCCGGTGTGCGGATCGTGAAAAACACGGTCGATTATCTTCGAGACCCACCATATTGCTGCAGCATCTTTGCGAAACACCATTCGACTCCAATATCTTCATCAACTACCAA
GGCAGTCGGGCTCATCTCTTTGCTGAGTTAGCATCTCTTCCGCTGGTTGAAGCGTTCCTAGGCGTTCCTAGGTCAGTGGTGGTCACCTTCCCTGCAGTGATTTCATTGCT
GAGTAGGTTAACGCCTTTTCCGCTGCTTGAGGCGTTCCTAGGCGTTCCTAGGTCAGTGGTGGTCACCTTCCCTGCTGTGATTTCATTGCTGAGTAGGTTAACGCCTCTTC
CGCTGGTTGAGGCGTTCCTAGTGATTTCATTGCTGAGTAGGTTAACGCTTCTTCCGCTGGTTGAGGTGTTCCTAGGTCAGCGGTGGTCACCTCCTATCTGCCCTACAGTG
ACTTCATTGCTGAGTAGGTTAACGCCTCTTCCGCTGGTTGAGGTGTTCCTAGCGACTGCAGCTTCTTCGCCGACGATCCAATGGGTGCAGCTTCTTTCCCAACGATCAAG
CGAGTGCGACTTCTTCACCAATGATCAATCGAGTGCAACTTTTTCGCCAACGATCGAGCGCAACGTCTTTGCCAACGATCCAGCGGGTGCAACTTCTTCGCCAATGATCG
AACGGGTGCAGTGTCTTCGCCAACGATCAAGTGGGTGCAGCTTCTTCGCCAAAGATCGAGCAGGTACAACTGCTTCGCCAACGATCAAACGGGTGCAACTTCTTCGCCAA
GGATTGAGCGAGTGCATCTTCATTGCCAAGGAACAAGTGAATGCAATGTCTTCGTTAACGATTGAGCAAGTGCAATTTCTTCGCCAAGGATCAAGCGAGTGCAACTTCTT
CCCCAATGATCCAGCGGGTGCAACGTCTTCGCCAATGATCCAGCGGGTGCAGCGCCAACGATCAAACGGGTGCAACTTCTTCGCCAACGATCGACTTGTGAAGTGCTTCG
ACTTTGCAGCTTGTGAAGTGCTTCGACTTTGCAGCTTGTTGAAGTTCTTCGGCTTTGTAGCTTGTGAAGTTCTTCGGCTTTGCAGATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCCTGGTGAGAGCCATCAGCGTCTCGAAAAGAAGAGCCTGGATGAAGCGGTTGACCACTCGGGTGAGGCAAGACTGAGCCCTGATCATCGACTTAATCCAACCAC
CCTTGACAGGAGAGAATCGGATTCGAGCCTGAATGAAGCGACCGACCTCTCGGGTGAGGCAAGGCCGAGCCCTAGTCATCAACTTAATTCGACCACCCATGACAAGGCAA
AACCGGCCGAGGAGGTAGAATTTGTCCCTCTGACAGCCGAAGATCGACGAGTCAACATTGGAACCAGTTTCTCGCTTCACGAAGGATCTTCGAAGTCTTCAGCTTTGAGT
TTGTTTGAAGACTTGGACTTGTTGATGAAGTTCTTTGGCTTCTTGTTGAAGTTCTTCGGCTTTGTAGCTTGTGAAATTCTTTGGCTTTGCAGATTGCGCTCGCTGAGGAG
GAGACGACACCGGTCTGGGATTGAGGCGTCACTTGGCAGAAGAAGAAGAAGCGTGATGGCATGGGTACCGACCGTTCGTTGCCCAAGAAAGAGACAGGATGGGTCTGGTT
GCCGGTGTGCGGATCGTGAAAAACACGGTCGATTATCTTCGAGACCCACCATATTGCTGCAGCATCTTTGCGAAACACCATTCGACTCCAATATCTTCATCAACTACCAA
GGCAGTCGGGCTCATCTCTTTGCTGAGTTAGCATCTCTTCCGCTGGTTGAAGCGTTCCTAGGCGTTCCTAGGTCAGTGGTGGTCACCTTCCCTGCAGTGATTTCATTGCT
GAGTAGGTTAACGCCTTTTCCGCTGCTTGAGGCGTTCCTAGGCGTTCCTAGGTCAGTGGTGGTCACCTTCCCTGCTGTGATTTCATTGCTGAGTAGGTTAACGCCTCTTC
CGCTGGTTGAGGCGTTCCTAGTGATTTCATTGCTGAGTAGGTTAACGCTTCTTCCGCTGGTTGAGGTGTTCCTAGGTCAGCGGTGGTCACCTCCTATCTGCCCTACAGTG
ACTTCATTGCTGAGTAGGTTAACGCCTCTTCCGCTGGTTGAGGTGTTCCTAGCGACTGCAGCTTCTTCGCCGACGATCCAATGGGTGCAGCTTCTTTCCCAACGATCAAG
CGAGTGCGACTTCTTCACCAATGATCAATCGAGTGCAACTTTTTCGCCAACGATCGAGCGCAACGTCTTTGCCAACGATCCAGCGGGTGCAACTTCTTCGCCAATGATCG
AACGGGTGCAGTGTCTTCGCCAACGATCAAGTGGGTGCAGCTTCTTCGCCAAAGATCGAGCAGGTACAACTGCTTCGCCAACGATCAAACGGGTGCAACTTCTTCGCCAA
GGATTGAGCGAGTGCATCTTCATTGCCAAGGAACAAGTGAATGCAATGTCTTCGTTAACGATTGAGCAAGTGCAATTTCTTCGCCAAGGATCAAGCGAGTGCAACTTCTT
CCCCAATGATCCAGCGGGTGCAACGTCTTCGCCAATGATCCAGCGGGTGCAGCGCCAACGATCAAACGGGTGCAACTTCTTCGCCAACGATCGACTTGTGAAGTGCTTCG
ACTTTGCAGCTTGTGAAGTGCTTCGACTTTGCAGCTTGTTGAAGTTCTTCGGCTTTGTAGCTTGTGAAGTTCTTCGGCTTTGCAGATTGTGA
Protein sequenceShow/hide protein sequence
MNPGESHQRLEKKSLDEAVDHSGEARLSPDHRLNPTTLDRRESDSSLNEATDLSGEARPSPSHQLNSTTHDKAKPAEEVEFVPLTAEDRRVNIGTSFSLHEGSSKSSALS
LFEDLDLLMKFFGFLLKFFGFVACEILWLCRLRSLRRRRHRSGIEASLGRRRRSVMAWVPTVRCPRKRQDGSGCRCADREKHGRLSSRPTILLQHLCETPFDSNIFINYQ
GSRAHLFAELASLPLVEAFLGVPRSVVVTFPAVISLLSRLTPFPLLEAFLGVPRSVVVTFPAVISLLSRLTPLPLVEAFLVISLLSRLTLLPLVEVFLGQRWSPPICPTV
TSLLSRLTPLPLVEVFLATAASSPTIQWVQLLSQRSSECDFFTNDQSSATFSPTIERNVFANDPAGATSSPMIERVQCLRQRSSGCSFFAKDRAGTTASPTIKRVQLLRQ
GLSECIFIAKEQVNAMSSLTIEQVQFLRQGSSECNFFPNDPAGATSSPMIQRVQRQRSNGCNFFANDRLVKCFDFAACEVLRLCSLLKFFGFVACEVLRLCRL