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Moc07g02010 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g02010
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description60S ribosomal protein L38
Genome locationchr7:1563060..1564181
RNA-Seq ExpressionMoc07g02010
SyntenyMoc07g02010
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022618 - ribonucleoprotein complex assembly (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002675 - Ribosomal protein L38e
IPR038464 - Ribosomal protein L38e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA3019627.1 60S ribosomal L38 [Olea europaea subsp. europaea]1.4e-2684.81Show/hide
Query:  LLLVLDPLVLYFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVS
        L L  D  V   D QPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD EKADKLKQSLPP +S
Subjt:  LLLVLDPLVLYFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVS

KAB1213254.1 60S ribosomal protein L38 [Morella rubra]1.4e-2687.01Show/hide
Query:  LLLLVLDPLVLYFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPP
        LL    +   L+ DVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPP
Subjt:  LLLLVLDPLVLYFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPP

KAE8646721.1 hypothetical protein Csa_005163 [Cucumis sativus]1.3e-2764.66Show/hide
Query:  VFDNGKSDFGYHSQTPLLLLVLDPLVLYFDV-----QPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDV
        VFD+ K+D    S  P+ +L L    L   +      PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPD 
Subjt:  VFDNGKSDFGYHSQTPLLLLVLDPLVLYFDV-----QPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDV

Query:  SSLASMCWTFPHWHLC
               W    W  C
Subjt:  SSLASMCWTFPHWHLC

KAF9663201.1 hypothetical protein SADUNF_Sadunf17G0013700 [Salix dunnii]2.2e-2786.08Show/hide
Query:  LVLDPLVLYFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVSSL
        +VL   +L FD QPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD EKADKLKQSLPP  S L
Subjt:  LVLDPLVLYFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVSSL

RVW73314.1 60S ribosomal protein L38 [Vitis vinifera]2.5e-2696.97Show/hide
Query:  YFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPP
        YF +QPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPP
Subjt:  YFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPP

TrEMBL top hitse value%identityAlignment
A0A103XQP8 Ribosomal protein L38e (Fragment)1.2e-2670.71Show/hide
Query:  VFDNGKSDFGYHSQTPLLLLVLDPLVL----YFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDV
        VFD  K++    S  P+ LL    ++L    +F  QPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD+EKA+KLKQSLPP +
Subjt:  VFDNGKSDFGYHSQTPLLLLVLDPLVL----YFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDV

A0A438CVC8 60S ribosomal protein L381.2e-2696.97Show/hide
Query:  YFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPP
        YF +QPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPP
Subjt:  YFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPP

A0A438GMB0 60S ribosomal protein L381.2e-2696.97Show/hide
Query:  YFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPP
        YF +QPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPP
Subjt:  YFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPP

A0A6A1VKI7 60S ribosomal protein L387.0e-2787.01Show/hide
Query:  LLLLVLDPLVLYFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPP
        LL    +   L+ DVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPP
Subjt:  LLLLVLDPLVLYFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPP

A0A6J1IBC7 60S ribosomal protein L38 isoform X13.5e-2695.52Show/hide
Query:  DVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVS
        D QPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPP +S
Subjt:  DVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVS

SwissProt top hitse value%identityAlignment
O22860 60S ribosomal protein L386.8e-2792.19Show/hide
Query:  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVS
        PKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSLPP +S
Subjt:  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVS

P46291 60S ribosomal protein L388.3e-2587.5Show/hide
Query:  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVS
        PKQIHEIKDFLLTARRKDAR+VKIK++KD+VKFKVRCSKYLYTLCV D EKADKLKQSLPP +S
Subjt:  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVS

P63173 60S ribosomal protein L382.1e-2075Show/hide
Query:  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVS
        P++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSLPP ++
Subjt:  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVS

Q32PB9 60S ribosomal protein L382.1e-2075Show/hide
Query:  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVS
        P++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSLPP ++
Subjt:  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVS

Q95V84 60S ribosomal protein L381.3e-2281.25Show/hide
Query:  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVS
        PKQIHEIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKADKLKQSLPP ++
Subjt:  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVS

Arabidopsis top hitse value%identityAlignment
AT2G43460.1 Ribosomal L38e protein family4.8e-2892.19Show/hide
Query:  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVS
        PKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSLPP +S
Subjt:  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVS

AT3G59540.1 Ribosomal L38e protein family4.8e-2892.19Show/hide
Query:  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVS
        PKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSLPP +S
Subjt:  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGATGGAAAGGGAAGTGTTTTTGACAATGGCAAGAGTGATTTTGGGTATCACTCCCAAACACCCTTATTATTATTGGTTCTTGATCCTCTTGTTTTGTATTTCGA
TGTGCAGCCGAAGCAAATTCACGAGATCAAAGATTTCCTTCTCACTGCCAGAAGGAAGGATGCACGCTCTGTGAAAATCAAGAGGAGCAAAGATGTCGTCAAGTTCAAAG
TTCGATGTTCCAAATATCTTTATACTCTGTGTGTTTTTGACTCTGAGAAGGCAGACAAGTTGAAGCAGTCTCTTCCACCAGACGTTTCCTCACTAGCTTCTATGTGCTGG
ACGTTTCCTCACTGGCATCTATGTGATGTGCATAGACGTTTCCTCACTGGCATCTATGTGATGTGCATAGACGTTTCCTCACTGGCATCTATATGTTTCCTCACTAGCTT
CTATGTGCTGTGTATAGACGTTTCCTCAGTCCTCACTAGCTTCTATGTACTGTGCATAGACGTTCCTCACTGGCTTCTATGTGTTGTGCATAGACGTTTCTTACTGGCTT
CTATGTGCTGTGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGATCGATGGAAAGGGAAGTGTTTTTGACAATGGCAAGAGTGATTTTGGGTATCACTCCCAAACACCCTTATTATTATTGGTTCTTGATCCTCTTGTTTTGTATTTCGA
TGTGCAGCCGAAGCAAATTCACGAGATCAAAGATTTCCTTCTCACTGCCAGAAGGAAGGATGCACGCTCTGTGAAAATCAAGAGGAGCAAAGATGTCGTCAAGTTCAAAG
TTCGATGTTCCAAATATCTTTATACTCTGTGTGTTTTTGACTCTGAGAAGGCAGACAAGTTGAAGCAGTCTCTTCCACCAGACGTTTCCTCACTAGCTTCTATGTGCTGG
ACGTTTCCTCACTGGCATCTATGTGATGTGCATAGACGTTTCCTCACTGGCATCTATGTGATGTGCATAGACGTTTCCTCACTGGCATCTATATGTTTCCTCACTAGCTT
CTATGTGCTGTGTATAGACGTTTCCTCAGTCCTCACTAGCTTCTATGTACTGTGCATAGACGTTCCTCACTGGCTTCTATGTGTTGTGCATAGACGTTTCTTACTGGCTT
CTATGTGCTGTGCATAG
Protein sequenceShow/hide protein sequence
MIDGKGSVFDNGKSDFGYHSQTPLLLLVLDPLVLYFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVSSLASMCW
TFPHWHLCDVHRRFLTGIYVMCIDVSSLASICFLTSFYVLCIDVSSVLTSFYVLCIDVPHWLLCVVHRRFLLASMCCA