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Moc07g02260 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g02260
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr7:1788876..1790837
RNA-Seq ExpressionMoc07g02260
SyntenyMoc07g02260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015389226.1 uncharacterized protein LOC107178482 [Citrus sinensis]1.9e-1857.45Show/hide
Query:  ERAIRAYAAPEFYGFNSVIAKPKVEVKTFQLKPAMFQMLQTVGQFYGHASDDPHLHLRC-IQIKTFYNGLNEATRLVVDASANEALLAKSYDEA
        +RAIR YA       +  I +P+VE   F+LKP MFQMLQT+GQF G  ++DPHLHL+  ++++TFYN LN +TRL+VDASAN ALL+KSY EA
Subjt:  ERAIRAYAAPEFYGFNSVIAKPKVEVKTFQLKPAMFQMLQTVGQFYGHASDDPHLHLRC-IQIKTFYNGLNEATRLVVDASANEALLAKSYDEA

XP_017216983.1 PREDICTED: uncharacterized protein LOC108194534 [Daucus carota subsp. sativus]2.6e-1530.83Show/hide
Query:  IERTFHRRKRAQRR---QQVEVGPI-------------------ERAIRAYAAPEFYGFNSVIAKPKVEVKTFQLKPAMFQMLQTVGQFYGHASDDPHLH
        IERTF+RR++AQR+    QV VG                     +RAIR YAAP F   NS I +P ++   F+LKP MFQMLQT+GQF G  ++DPHLH
Subjt:  IERTFHRRKRAQRR---QQVEVGPI-------------------ERAIRAYAAPEFYGFNSVIAKPKVEVKTFQLKPAMFQMLQTVGQFYGHASDDPHLH

Query:  LR--------------------------------------------------------------------------------------------------
        LR                                                                                                  
Subjt:  LR--------------------------------------------------------------------------------------------------

Query:  -----CIQIKTFYNGLNEATRLVVDASANEALLAKSYDEA
             CIQ++TFYNGLN  T++VVDASAN ALL+KSY++A
Subjt:  -----CIQIKTFYNGLNEATRLVVDASANEALLAKSYDEA

XP_017233063.1 PREDICTED: uncharacterized protein LOC108207110 [Daucus carota subsp. sativus]1.1e-1531.12Show/hide
Query:  EIERTFHRRKRAQRR-QQVEVG----------PI-----------ERAIRAYAAPEFYGFNSVIAKPKVEVKTFQLKPAMFQMLQTVGQFYGHASDDPHL
        EIERTF+RR++AQR+ +Q +V           PI           +RAIR YAAP F   NS I +P ++   F+LKP MFQMLQT+GQF G  ++DPHL
Subjt:  EIERTFHRRKRAQRR-QQVEVG----------PI-----------ERAIRAYAAPEFYGFNSVIAKPKVEVKTFQLKPAMFQMLQTVGQFYGHASDDPHL

Query:  HLR-------------------------------------------------------------------------------------------------
        HLR                                                                                                 
Subjt:  HLR-------------------------------------------------------------------------------------------------

Query:  ------CIQIKTFYNGLNEATRLVVDASANEALLAKSYDEA
              CIQ++TFYNGLN  T++VVDASAN ALL+KSY++A
Subjt:  ------CIQIKTFYNGLNEATRLVVDASANEALLAKSYDEA

XP_022153147.1 probable serine/threonine-protein kinase PBL11 [Momordica charantia]9.4e-3455.9Show/hide
Query:  HDLQGLEYLLQNEIERTFHRRKRAQRRQQVEVGPI-------------------------------ERAIRAYAAPEFYGFNSVIAKPKVEVKTFQLKPA
        HDLQ LEYLL NEIE TF RR R QRRQQVE  P+                               ERAIRAYAA   + F+ VIA P++E + F+LKP 
Subjt:  HDLQGLEYLLQNEIERTFHRRKRAQRRQQVEVGPI-------------------------------ERAIRAYAAPEFYGFNSVIAKPKVEVKTFQLKPA

Query:  MFQMLQTVGQFYGHASDDPHLHLR-CIQIKTFYNGLNEATRLVVDASANEALLAKSYDEAI
        MFQMLQTVG+F+G+  +D HLHLR  ++IK FYNGL+EATRLVVDASAN ALL+KSY EAI
Subjt:  MFQMLQTVGQFYGHASDDPHLHLR-CIQIKTFYNGLNEATRLVVDASANEALLAKSYDEAI

XP_030505151.1 uncharacterized protein LOC115720131 [Cannabis sativa]1.2e-1744.26Show/hide
Query:  RAIRAYAAPEFYGFNSVIAKPKVEVKTFQLKPAMFQMLQTVGQFYGHASDDPHLHL------------------------------RCIQIKTFYNGLNE
        RAIR Y AP F   NS I +PK++   F+LKP MFQM+QTVG F G  S+DPHLHL                               CI ++TFYNGLN 
Subjt:  RAIRAYAAPEFYGFNSVIAKPKVEVKTFQLKPAMFQMLQTVGQFYGHASDDPHLHL------------------------------RCIQIKTFYNGLNE

Query:  ATRLVVDASANEALLAKSYDEA
        A+++V+DAS N A+ +KSY++A
Subjt:  ATRLVVDASANEALLAKSYDEA

TrEMBL top hitse value%identityAlignment
A0A6J1DI54 probable serine/threonine-protein kinase PBL114.5e-3455.9Show/hide
Query:  HDLQGLEYLLQNEIERTFHRRKRAQRRQQVEVGPI-------------------------------ERAIRAYAAPEFYGFNSVIAKPKVEVKTFQLKPA
        HDLQ LEYLL NEIE TF RR R QRRQQVE  P+                               ERAIRAYAA   + F+ VIA P++E + F+LKP 
Subjt:  HDLQGLEYLLQNEIERTFHRRKRAQRRQQVEVGPI-------------------------------ERAIRAYAAPEFYGFNSVIAKPKVEVKTFQLKPA

Query:  MFQMLQTVGQFYGHASDDPHLHLR-CIQIKTFYNGLNEATRLVVDASANEALLAKSYDEAI
        MFQMLQTVG+F+G+  +D HLHLR  ++IK FYNGL+EATRLVVDASAN ALL+KSY EAI
Subjt:  MFQMLQTVGQFYGHASDDPHLHLR-CIQIKTFYNGLNEATRLVVDASANEALLAKSYDEAI

A0A6J1DVZ9 uncharacterized protein LOC1110249702.6e-1367.24Show/hide
Query:  ERAIRAYAAPEFYGFNSVIAKPKVEVKTFQLKPAMFQMLQTVGQFYGHASDDPHLHLR
        ER IRAYAAP  +GF+ VIA P +E + F+LK  MFQMLQTVGQF+G+ S+DPHLHLR
Subjt:  ERAIRAYAAPEFYGFNSVIAKPKVEVKTFQLKPAMFQMLQTVGQFYGHASDDPHLHLR

A0A6J1DX14 uncharacterized protein LOC1110252347.5e-1351.06Show/hide
Query:  IERAIRAYAAPEFYGFNSVIAKPKVEVKTFQLKPAMFQMLQTVGQFYGHASDDPHLHLRCIQIKTFYNGLNEATRLVVDASANEALLAKSYDEA
        IE+ IRAYAAP F+ FN VI  P +E   F+LKPAMFQMLQ    F+G AS+DP+ HL+        + + E    V+DAS+N+ALL K Y EA
Subjt:  IERAIRAYAAPEFYGFNSVIAKPKVEVKTFQLKPAMFQMLQTVGQFYGHASDDPHLHLRCIQIKTFYNGLNEATRLVVDASANEALLAKSYDEA

A0A6J1EQ90 uncharacterized protein LOC1114364115.2e-1428.36Show/hide
Query:  GLEYLLQNEIERTFHRRKRAQRR------QQVEVG----------------------PI------ERAIRAYAAPEFYGFNSVIAKPKVEVKTFQLKPAM
        GLE++L  EIERTF RR + +++      QQ+E+G                      PI      ERAIRAYA P     N  I +P+++  TF+LKP M
Subjt:  GLEYLLQNEIERTFHRRKRAQRR------QQVEVG----------------------PI------ERAIRAYAAPEFYGFNSVIAKPKVEVKTFQLKPAM

Query:  FQMLQTVGQFYGHASDDPHLHLR-----------------------------------------------------------------------------
        FQMLQT+GQF+G   +DPHLHL+                                                                             
Subjt:  FQMLQTVGQFYGHASDDPHLHLR-----------------------------------------------------------------------------

Query:  ---------------------------------CIQIKTFYNGLNEATRLVVDASANEALLAKSYDEA
                                         CIQ++TFYNGLN  T+ VVDASAN A+L+K+Y+EA
Subjt:  ---------------------------------CIQIKTFYNGLNEATRLVVDASANEALLAKSYDEA

U5CUI2 Retrotrans_gag domain-containing protein9.8e-1330.77Show/hide
Query:  RAIRAYAAPEFYGFNSVIAKPKVEVKTFQLKPAMFQMLQTVGQFYGHASDDPHLHLR-------------------------------------------
        RAIR YAAP F   N  I +P+++   F+LKP MFQMLQTVGQF G  ++DPHLHLR                                           
Subjt:  RAIRAYAAPEFYGFNSVIAKPKVEVKTFQLKPAMFQMLQTVGQFYGHASDDPHLHLR-------------------------------------------

Query:  ------------------------------------------------------------CIQIKTFYNGLNEATRLVVDASANEALLAKSYDEA
                                                                    CIQ++TFYNGLN A+R+V+DASAN A+L+KSY+EA
Subjt:  ------------------------------------------------------------CIQIKTFYNGLNEATRLVVDASANEALLAKSYDEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTCACCGTCGGTCGAATGGATGAACGTCGTCGTCGAGATAGGAGGTTGTCGCCGCCGAATCGTTGTCGTTCGCACGCAGTGGAGTTCGATTCGCACGACAATGG
AGCTGATCTACTTGAGTTTAGATCGTGGGTACTTATGAATAAGGCTCACCTAGTGAATGCGCACGATCTGCAAGGGTTGGAATATCTACTTCAAAACGAGATAGAGCGCA
CTTTTCATCGCAGAAAAAGAGCACAACGTAGACAGCAAGTAGAAGTTGGCCCTATAGAGAGAGCTATAAGAGCGTACGCCGCTCCAGAATTCTACGGCTTCAACTCAGTT
ATAGCAAAACCAAAGGTTGAAGTAAAGACATTTCAGTTGAAACCAGCCATGTTTCAAATGCTCCAAACTGTGGGACAATTTTACGGGCACGCTTCTGATGACCCTCATCT
CCATTTAAGGTGCATCCAGATTAAAACTTTTTATAATGGGCTTAATGAGGCTACAAGATTGGTAGTAGATGCATCGGCAAATGAGGCTTTGTTAGCTAAATCATACGATG
AGGCTATCTCTAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTCACCGTCGGTCGAATGGATGAACGTCGTCGTCGAGATAGGAGGTTGTCGCCGCCGAATCGTTGTCGTTCGCACGCAGTGGAGTTCGATTCGCACGACAATGG
AGCTGATCTACTTGAGTTTAGATCGTGGGTACTTATGAATAAGGCTCACCTAGTGAATGCGCACGATCTGCAAGGGTTGGAATATCTACTTCAAAACGAGATAGAGCGCA
CTTTTCATCGCAGAAAAAGAGCACAACGTAGACAGCAAGTAGAAGTTGGCCCTATAGAGAGAGCTATAAGAGCGTACGCCGCTCCAGAATTCTACGGCTTCAACTCAGTT
ATAGCAAAACCAAAGGTTGAAGTAAAGACATTTCAGTTGAAACCAGCCATGTTTCAAATGCTCCAAACTGTGGGACAATTTTACGGGCACGCTTCTGATGACCCTCATCT
CCATTTAAGGTGCATCCAGATTAAAACTTTTTATAATGGGCTTAATGAGGCTACAAGATTGGTAGTAGATGCATCGGCAAATGAGGCTTTGTTAGCTAAATCATACGATG
AGGCTATCTCTAGCTAA
Protein sequenceShow/hide protein sequence
MEVTVGRMDERRRRDRRLSPPNRCRSHAVEFDSHDNGADLLEFRSWVLMNKAHLVNAHDLQGLEYLLQNEIERTFHRRKRAQRRQQVEVGPIERAIRAYAAPEFYGFNSV
IAKPKVEVKTFQLKPAMFQMLQTVGQFYGHASDDPHLHLRCIQIKTFYNGLNEATRLVVDASANEALLAKSYDEAISS