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Moc07g02460 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g02460
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibosomal L18p/L5e family protein
Genome locationchr7:2063652..2066263
RNA-Seq ExpressionMoc07g02460
SyntenyMoc07g02460
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008097 - 5S rRNA binding (molecular function)
InterPro domainsIPR005484 - Ribosomal protein L18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140885.1 uncharacterized protein LOC101204363 [Cucumis sativus]2.1e-4880.95Show/hide
Query:  MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM
        MS ++ HLL++V+SCRKI+AQVTNPA+SSI+AMASSSEQEFVAY RSKL+RFPRSNNFWDS +ASRVGEKLG RL EIGVSDV+IDL EELSRP YYRKM
Subjt:  MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM

Query:  VLPLFDSVRRSGVAIDGAENLGTGFV
        VLPLFDSV+RSGVA+DGAE LGTG +
Subjt:  VLPLFDSVRRSGVAIDGAENLGTGFV
XP_022150463.1 uncharacterized protein LOC111018600 [Momordica charantia]1.3e-63100Show/hide
Query:  MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM
        MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM
Subjt:  MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM

Query:  VLPLFDSVRRSGVAIDGAENLGTGFVYSPY
        VLPLFDSVRRSGVAIDGAENLGTGFVYSPY
Subjt:  VLPLFDSVRRSGVAIDGAENLGTGFVYSPY
XP_038884095.1 uncharacterized protein LOC120075027 isoform X2 [Benincasa hispida]1.6e-4880.62Show/hide
Query:  MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM
        MS S+ HLL++V+SCRKI+AQVTNPA+SSIVAMASSSEQEFVAY RSKL+RFPRSNNFWDS +ASRVGEKLG RL EIGVSDV+IDL EE SRP YYRKM
Subjt:  MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM

Query:  VLPLFDSVRRSGVAIDGAENLGTGFVYSP
        VLPLFDSV+RSGVA+DGAE LGTG   +P
Subjt:  VLPLFDSVRRSGVAIDGAENLGTGFVYSP
XP_038884096.1 uncharacterized protein LOC120075027 isoform X3 [Benincasa hispida]2.1e-4882.4Show/hide
Query:  MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM
        MS S+ HLL++V+SCRKI+AQVTNPA+SSIVAMASSSEQEFVAY RSKL+RFPRSNNFWDS +ASRVGEKLG RL EIGVSDV+IDL EE SRP YYRKM
Subjt:  MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM

Query:  VLPLFDSVRRSGVAIDGAENLGTGF
        VLPLFDSV+RSGVA+DGAE LGTG+
Subjt:  VLPLFDSVRRSGVAIDGAENLGTGF
XP_038884098.1 uncharacterized protein LOC120075027 isoform X5 [Benincasa hispida]2.7e-4883.06Show/hide
Query:  MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM
        MS S+ HLL++V+SCRKI+AQVTNPA+SSIVAMASSSEQEFVAY RSKL+RFPRSNNFWDS +ASRVGEKLG RL EIGVSDV+IDL EE SRP YYRKM
Subjt:  MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM

Query:  VLPLFDSVRRSGVAIDGAENLGTG
        VLPLFDSV+RSGVA+DGAE LGTG
Subjt:  VLPLFDSVRRSGVAIDGAENLGTG
TrEMBL top hitse value%identityAlignment
A0A0A0KE39 Uncharacterized protein1.0e-4880.95Show/hide
Query:  MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM
        MS ++ HLL++V+SCRKI+AQVTNPA+SSI+AMASSSEQEFVAY RSKL+RFPRSNNFWDS +ASRVGEKLG RL EIGVSDV+IDL EELSRP YYRKM
Subjt:  MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM

Query:  VLPLFDSVRRSGVAIDGAENLGTGFV
        VLPLFDSV+RSGVA+DGAE LGTG +
Subjt:  VLPLFDSVRRSGVAIDGAENLGTGFV
A0A1S4DVU4 uncharacterized protein LOC1034886721.6e-4677.78Show/hide
Query:  MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM
        MS ++ HLL++V+SCRKI+AQVTNPA+SSI+AMASSSEQEFVAY RSKL+RFPRSNNFWDS +ASRVG KLG RL EIGVSDV+IDL EELSRP YYRKM
Subjt:  MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM

Query:  VLPLFDSVRRSGVAIDGAENLGTGFV
        VLPLFDSV+RSG+A+DG E LG G +
Subjt:  VLPLFDSVRRSGVAIDGAENLGTGFV
A0A5D3BWW4 Uncharacterized protein1.6e-4677.78Show/hide
Query:  MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM
        MS ++ HLL++V+SCRKI+AQVTNPA+SSI+AMASSSEQEFVAY RSKL+RFPRSNNFWDS +ASRVG KLG RL EIGVSDV+IDL EELSRP YYRKM
Subjt:  MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM

Query:  VLPLFDSVRRSGVAIDGAENLGTGFV
        VLPLFDSV+RSG+A+DG E LG G +
Subjt:  VLPLFDSVRRSGVAIDGAENLGTGFV
A0A6J1D9I9 uncharacterized protein LOC1110186006.5e-64100Show/hide
Query:  MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM
        MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM
Subjt:  MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM

Query:  VLPLFDSVRRSGVAIDGAENLGTGFVYSPY
        VLPLFDSVRRSGVAIDGAENLGTGFVYSPY
Subjt:  VLPLFDSVRRSGVAIDGAENLGTGFVYSPY
A0A6J1EVG7 uncharacterized protein LOC1114363406.1e-4677.78Show/hide
Query:  MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM
        MS ++ HLL++V+SCRKI+AQVTNP +S+I+AMASSSEQEFVAYNRSKL+RFPRSNNFWDS IASRVGEKLG RL EIGVSDV+IDL EELSRP  YR  
Subjt:  MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKM

Query:  VLPLFDSVRRSGVAIDGAENLGTGFV
        VLPLFDSVRRSGVA++GAE LG+G +
Subjt:  VLPLFDSVRRSGVAIDGAENLGTGFV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G43310.1 Ribosomal L18p/L5e family protein1.3e-4069.23Show/hide
Query:  RRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKMVLPL
        R HLLQ+V+SCRKI+AQVT P SS+I+AMASSSEQEF+A +R+ L RFP SN+FWDS  ASRVGEKLGLRL E+GV  V ID  EE+SRP ++RK VLPL
Subjt:  RRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKMVLPL

Query:  FDSVRRSGVAIDGAENL
        FDSVRR+G+ +DG E L
Subjt:  FDSVRRSGVAIDGAENL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGAAGCCGGAGGCACCTCCTCCAAGTGGTTGTTTCCTGCCGGAAAATCAGCGCTCAGGTCACAAATCCGGCGAGCTCCTCCATCGTCGCCATGGCCTCATCCTC
GGAGCAGGAATTCGTGGCCTACAACCGATCGAAACTCAACCGCTTCCCCCGATCCAACAACTTCTGGGACTCCATGATCGCCTCCCGCGTCGGCGAAAAGCTAGGGCTCC
GCCTGACCGAGATCGGCGTCTCCGATGTTCAGATCGACCTCCGGGAAGAGCTCTCGCGCCCTGCTTACTACAGGAAGATGGTGCTGCCGCTGTTCGATTCCGTGCGCCGC
TCCGGCGTCGCCATTGACGGAGCTGAGAACCTTGGAACAGGCTTCGTCTATTCTCCATACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGAAGCCGGAGGCACCTCCTCCAAGTGGTTGTTTCCTGCCGGAAAATCAGCGCTCAGGTCACAAATCCGGCGAGCTCCTCCATCGTCGCCATGGCCTCATCCTC
GGAGCAGGAATTCGTGGCCTACAACCGATCGAAACTCAACCGCTTCCCCCGATCCAACAACTTCTGGGACTCCATGATCGCCTCCCGCGTCGGCGAAAAGCTAGGGCTCC
GCCTGACCGAGATCGGCGTCTCCGATGTTCAGATCGACCTCCGGGAAGAGCTCTCGCGCCCTGCTTACTACAGGAAGATGGTGCTGCCGCTGTTCGATTCCGTGCGCCGC
TCCGGCGTCGCCATTGACGGAGCTGAGAACCTTGGAACAGGCTTCGTCTATTCTCCATACTAA
Protein sequenceShow/hide protein sequence
MSRSRRHLLQVVVSCRKISAQVTNPASSSIVAMASSSEQEFVAYNRSKLNRFPRSNNFWDSMIASRVGEKLGLRLTEIGVSDVQIDLREELSRPAYYRKMVLPLFDSVRR
SGVAIDGAENLGTGFVYSPY