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Moc07g02790 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g02790
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr7:2430167..2431054
RNA-Seq ExpressionMoc07g02790
SyntenyMoc07g02790
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032390.1 uncharacterized protein E6C27_scaffold219G002650 [Cucumis melo var. makuwa]8.1e-0656.52Show/hide
Query:  KRGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATK
        K+  NI +KLQRKFPN +LSP+   +CLR+L+ VDHL LHC   +K
Subjt:  KRGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATK

KAA0056469.1 uncharacterized protein E6C27_scaffold186G002430 [Cucumis melo var. makuwa]1.1e-0735.14Show/hide
Query:  KVCKRGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATKAWSFIASLLDLSCVFLGELRILFQKVSEDLSSKGKLVSSGIVRPRLYFGSF
        K  +R  N  +KLQRKFP  +LS S+C +CL++ E +DHL LHC  A+K W    S+  +      ++     +  +      +  S G V    + G F
Subjt:  KVCKRGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATKAWSFIASLLDLSCVFLGELRILFQKVSEDLSSKGKLVSSGIVRPRLYFGSF

Query:  GKKGIVASLSI
        GKK IV  L I
Subjt:  GKKGIVASLSI

TYJ96358.1 uncharacterized protein E5676_scaffold1159G00180 [Cucumis melo var. makuwa]8.1e-0656.52Show/hide
Query:  KRGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATK
        K+  NI +KLQRKFPN +LSP+   +CLR+L+ VDHL LHC   +K
Subjt:  KRGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATK

TYK07901.1 DUF21 domain-containing protein [Cucumis melo var. makuwa]1.6e-0636.36Show/hide
Query:  CHLW-----RGVFWVAGKVCKRGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATKAWSFIASLLDL
        CH+W     + V +    +  R  N   K+Q+ F +  LSPS+C +C ++ E +DHL LHCT   KAW+ +  + DL
Subjt:  CHLW-----RGVFWVAGKVCKRGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATKAWSFIASLLDL

TYK31299.1 protein FAM91A1 [Cucumis melo var. makuwa]1.8e-0857.14Show/hide
Query:  RGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATKAWSFIASLLDL
        R  NI +KLQRKFPN +LSPSIC +CL++ E  DHL LHC  A K W+ I  L  L
Subjt:  RGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATKAWSFIASLLDL

TrEMBL top hitse value%identityAlignment
A0A5A7SNM9 Uncharacterized protein3.9e-0656.52Show/hide
Query:  KRGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATK
        K+  NI +KLQRKFPN +LSP+   +CLR+L+ VDHL LHC   +K
Subjt:  KRGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATK

A0A5D3BDR5 Uncharacterized protein3.9e-0656.52Show/hide
Query:  KRGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATK
        K+  NI +KLQRKFPN +LSP+   +CLR+L+ VDHL LHC   +K
Subjt:  KRGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATK

A0A5D3C7R2 DUF21 domain-containing protein7.9e-0736.36Show/hide
Query:  CHLW-----RGVFWVAGKVCKRGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATKAWSFIASLLDL
        CH+W     + V +    +  R  N   K+Q+ F +  LSPS+C +C ++ E +DHL LHCT   KAW+ +  + DL
Subjt:  CHLW-----RGVFWVAGKVCKRGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATKAWSFIASLLDL

A0A5D3E019 zf-RVT domain-containing protein5.5e-0835.14Show/hide
Query:  KVCKRGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATKAWSFIASLLDLSCVFLGELRILFQKVSEDLSSKGKLVSSGIVRPRLYFGSF
        K  +R  N  +KLQRKFP  +LS S+C +CL++ E +DHL LHC  A+K W    S+  +      ++     +  +      +  S G V    + G F
Subjt:  KVCKRGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATKAWSFIASLLDLSCVFLGELRILFQKVSEDLSSKGKLVSSGIVRPRLYFGSF

Query:  GKKGIVASLSI
        GKK IV  L I
Subjt:  GKKGIVASLSI

A0A5D3E632 Protein FAM91A18.5e-0957.14Show/hide
Query:  RGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATKAWSFIASLLDL
        R  NI +KLQRKFPN +LSPSIC +CL++ E  DHL LHC  A K W+ I  L  L
Subjt:  RGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATKAWSFIASLLDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTGGCACTTTGTGGTGGAGAAAGACAGTTTGTGGAGACGGGTTATTGCTGCCATTTATGGCGTGGAGTCTTTTGGGTGGCTGGCAAAGTCTGCAAAAGAGGAAC
TAATATAGCTGATAAGCTTCAAAGAAAGTTTCCTAATTGGGCTCTTTCCCCTTCTATTTGTGGTATGTGCTTAAGGGATTTGGAAATGGTGGATCACCTTGTTTTGCATT
GTACTTCTGCGACCAAGGCTTGGTCTTTTATTGCTTCTCTTTTGGATCTCTCCTGTGTCTTCCTAGGAGAATTGAGGATTTTATTTCAGAAGGTTTCCGAGGATCTCAGC
TCAAAGGGAAAGCTAGTGTCCTCTGGAATTGTGCGGCCCAGGCTTTACTTTGGCTCCTTTGGAAAGAAAGGAATAGTCGCCTCTTTGAGTATATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTGGCACTTTGTGGTGGAGAAAGACAGTTTGTGGAGACGGGTTATTGCTGCCATTTATGGCGTGGAGTCTTTTGGGTGGCTGGCAAAGTCTGCAAAAGAGGAAC
TAATATAGCTGATAAGCTTCAAAGAAAGTTTCCTAATTGGGCTCTTTCCCCTTCTATTTGTGGTATGTGCTTAAGGGATTTGGAAATGGTGGATCACCTTGTTTTGCATT
GTACTTCTGCGACCAAGGCTTGGTCTTTTATTGCTTCTCTTTTGGATCTCTCCTGTGTCTTCCTAGGAGAATTGAGGATTTTATTTCAGAAGGTTTCCGAGGATCTCAGC
TCAAAGGGAAAGCTAGTGTCCTCTGGAATTGTGCGGCCCAGGCTTTACTTTGGCTCCTTTGGAAAGAAAGGAATAGTCGCCTCTTTGAGTATATTTTGA
Protein sequenceShow/hide protein sequence
MALALCGGERQFVETGYCCHLWRGVFWVAGKVCKRGTNIADKLQRKFPNWALSPSICGMCLRDLEMVDHLVLHCTSATKAWSFIASLLDLSCVFLGELRILFQKVSEDLS
SKGKLVSSGIVRPRLYFGSFGKKGIVASLSIF