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Moc07g03030 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g03030
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein TIC 22-like, chloroplastic
Genome locationchr7:2729920..2731475
RNA-Seq ExpressionMoc07g03030
SyntenyMoc07g03030
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0009507 - chloroplast (cellular component)
InterPro domainsIPR007378 - Tic22-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138357.1 protein TIC 22-like, chloroplastic isoform X1 [Cucumis sativus]1.6e-3690.8Show/hide
Query:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQ
        +SKSLILR QNKSYRPAFFRKEDLE SLQRASREQNQ+NPA RPGDIQVA FEE+IKGMKDNSISTWDD+VFIPPGFDVSTDPKKQQ
Subjt:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQ

XP_022150384.1 protein TIC 22-like, chloroplastic [Momordica charantia]1.8e-4098.86Show/hide
Query:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQQ
        +SKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQQ
Subjt:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQQ

XP_022150433.1 protein TIC 22-like, chloroplastic isoform X1 [Momordica charantia]1.8e-4098.86Show/hide
Query:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQQ
        +SKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQQ
Subjt:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQQ

XP_022150434.1 protein TIC 22-like, chloroplastic isoform X2 [Momordica charantia]1.4e-4097.75Show/hide
Query:  IKSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQQ
        + SKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQQ
Subjt:  IKSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQQ

XP_038886518.1 protein TIC 22-like, chloroplastic isoform X1 [Benincasa hispida]5.5e-3790.8Show/hide
Query:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQ
        +SKSLILRSQNKSYRPAFFRKEDLE SLQRASREQNQ+NPAFRPGDIQV+ FEE+IKGMKDNSISTWDD+VFIPPGFDV TDPKKQQ
Subjt:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQ

TrEMBL top hitse value%identityAlignment
A0A0A0K912 Uncharacterized protein1.0e-3691.86Show/hide
Query:  SKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQ
        SKSLILR QNKSYRPAFFRKEDLE SLQRASREQNQ+NPA RPGDIQVA FEE+IKGMKDNSISTWDD+VFIPPGFDVSTDPKKQQ
Subjt:  SKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQ

A0A5D3BU87 Protein TIC 22-like3.9e-3688.51Show/hide
Query:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQ
        +SKSL+LRSQNKSYRPAFFRKEDLE SLQ A REQNQ+NPA RPGDIQVA FEE+IKGMKDNSISTWDD+VFIPPGFDVSTDPKKQQ
Subjt:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQ

A0A6J1D9F7 protein TIC 22-like, chloroplastic isoform X18.9e-4198.86Show/hide
Query:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQQ
        +SKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQQ
Subjt:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQQ

A0A6J1D9X2 protein TIC 22-like, chloroplastic8.9e-4198.86Show/hide
Query:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQQ
        +SKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQQ
Subjt:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQQ

A0A6J1DA19 protein TIC 22-like, chloroplastic isoform X26.8e-4197.75Show/hide
Query:  IKSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQQ
        + SKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQQ
Subjt:  IKSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQQ

SwissProt top hitse value%identityAlignment
F4J469 Protein TIC 22-like, chloroplastic7.5e-2967.44Show/hide
Query:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQ
        +SKSLILRS+N SYRP FFRKEDLEKSL RAS +QN++NPA +PGDIQVA FE+++KGM++++ S WDD+VFIPPGF+VST+  ++
Subjt:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQ

Q9SZB2 Protein TIC 22, chloroplastic2.4e-0638.75Show/hide
Query:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQ---RASREQNQVNPAFRPGDIQVAGFEEVIKGMK-DNSISTWDDVVFIPPG
        +S+ L++R +N+ Y P +F KED+E+ L    RASR   Q         I V   E+V++ M+     S W+DV+FIPPG
Subjt:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQ---RASREQNQVNPAFRPGDIQVAGFEEVIKGMK-DNSISTWDDVVFIPPG

Q9ZST9 Protein TIC 22, chloroplastic9.6e-0841.56Show/hide
Query:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMK-DNSISTWDDVVFIPPG
        +S  L+++ +NK Y P +F KEDLE  L + SR    V  +     I V  FE+V+K M+     S W+D+VFIPPG
Subjt:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMK-DNSISTWDDVVFIPPG

Arabidopsis top hitse value%identityAlignment
AT3G23710.1 Tic22-like family protein5.3e-3067.44Show/hide
Query:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQ
        +SKSLILRS+N SYRP FFRKEDLEKSL RAS +QN++NPA +PGDIQVA FE+++KGM++++ S WDD+VFIPPGF+VST+  ++
Subjt:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQ

AT4G33350.1 Tic22-like family protein1.7e-0738.75Show/hide
Query:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQ---RASREQNQVNPAFRPGDIQVAGFEEVIKGMK-DNSISTWDDVVFIPPG
        +S+ L++R +N+ Y P +F KED+E+ L    RASR   Q         I V   E+V++ M+     S W+DV+FIPPG
Subjt:  KSKSLILRSQNKSYRPAFFRKEDLEKSLQ---RASREQNQVNPAFRPGDIQVAGFEEVIKGMK-DNSISTWDDVVFIPPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATTATGCAAAGCCAAATCTTCATTTCTTGCAGCCTTGCAGCTACATTCTGGAAGATTATCCTGGAGCCCTTCCACTACGGCTCTTCCAAATGACCTGAAAACTCT
CCTTTCTCTTACCTTATCAGGCAACCCCTTTATAAAGGAAAAAGAAGCTTCTTTAGATACACTTGAGTGTTTTTTTTGGGCAGCATTTTTTGTTCAACGGGAGAAGTTTT
ATGTAATCGGCTACCTCTGGATTCTGCCAAGTCATCATGGATTCAGAACTCTATTGAGCTGCCTATCTGGGGACTTGAATATACCCTTGAATTTCTTGACTATAAAATCG
AAAAGCTTGATACTGAGGAGCCAAAACAAGAGCTACCGTCCTGCATTTTTCAGAAAGGAGGATTTAGAAAAATCTCTCCAAAGAGCATCTCGAGAACAAAATCAAGTGAA
TCCTGCCTTCCGACCGGGCGATATCCAGGTTGCTGGTTTTGAAGAAGTAATAAAAGGAATGAAGGATAATTCAATTTCAACATGGGATGATGTAGTCTTCATTCCACCTG
GATTTGATGTTTCAACTGACCCCAAAAAGCAACAACAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCAATTATGCAAAGCCAAATCTTCATTTCTTGCAGCCTTGCAGCTACATTCTGGAAGATTATCCTGGAGCCCTTCCACTACGGCTCTTCCAAATGACCTGAAAACTCT
CCTTTCTCTTACCTTATCAGGCAACCCCTTTATAAAGGAAAAAGAAGCTTCTTTAGATACACTTGAGTGTTTTTTTTGGGCAGCATTTTTTGTTCAACGGGAGAAGTTTT
ATGTAATCGGCTACCTCTGGATTCTGCCAAGTCATCATGGATTCAGAACTCTATTGAGCTGCCTATCTGGGGACTTGAATATACCCTTGAATTTCTTGACTATAAAATCG
AAAAGCTTGATACTGAGGAGCCAAAACAAGAGCTACCGTCCTGCATTTTTCAGAAAGGAGGATTTAGAAAAATCTCTCCAAAGAGCATCTCGAGAACAAAATCAAGTGAA
TCCTGCCTTCCGACCGGGCGATATCCAGGTTGCTGGTTTTGAAGAAGTAATAAAAGGAATGAAGGATAATTCAATTTCAACATGGGATGATGTAGTCTTCATTCCACCTG
GATTTGATGTTTCAACTGACCCCAAAAAGCAACAACAATAG
Protein sequenceShow/hide protein sequence
MQLCKAKSSFLAALQLHSGRLSWSPSTTALPNDLKTLLSLTLSGNPFIKEKEASLDTLECFFWAAFFVQREKFYVIGYLWILPSHHGFRTLLSCLSGDLNIPLNFLTIKS
KSLILRSQNKSYRPAFFRKEDLEKSLQRASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQQQ