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Moc07g03290 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g03290
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr7:2915330..2915896
RNA-Seq ExpressionMoc07g03290
SyntenyMoc07g03290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PIN01433.1 hypothetical protein CDL12_26059 [Handroanthus impetiginosus]2.2e-1138.46Show/hide
Query:  KSGELTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLKDKLVIDRS
        KS  L + A IWL+F+ + ++ T H   VT DR LLL CI+   + DV ++I   I+Q      D L+FP+LITKLC R  V   ++EE +  +  ID +
Subjt:  KSGELTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLKDKLVIDRS

Query:  TVERLMNQEPTRRGAVQ
        T+ R++N      G  Q
Subjt:  TVERLMNQEPTRRGAVQ

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]9.1e-1343.93Show/hide
Query:  LTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLKDKLVIDRSTVER
        LT  A +W +F+KS L+ TTH  +V+KDR+LLL  +L   SI+V ++IH EI     +K   LFFP+LIT+LC     P L  EE L +   ID   V R
Subjt:  LTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLKDKLVIDRSTVER

Query:  LMNQEPT
        +  + PT
Subjt:  LMNQEPT

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]3.5e-1234.3Show/hide
Query:  KSGELTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLK-----DKL
        + G LT  A +W +F+KS L+ TTH  +V+KDR+LLL  +L   SI+V ++IH EI     +K   LFFP+LIT+LC     P L  EE L      D +
Subjt:  KSGELTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLK-----DKL

Query:  VIDRSTVE---RLMNQEPTRRGAV--QNVAINEMMAQLAKMQKQLSRMQEAQSASIKK---------------AKKRDASILAALEHFKVAAPFPSAVPT
         + R T E    L  Q  T R  V   + A  +++ QL  ++++LS+ QE Q   +                 +K+RD ++  AL++     P P+  PT
Subjt:  VIDRSTVE---RLMNQEPTRRGAV--QNVAINEMMAQLAKMQKQLSRMQEAQSASIKK---------------AKKRDASILAALEHFKVAAPFPSAVPT

Query:  RLKELLE
          +ELL+
Subjt:  RLKELLE

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]3.7e-1436.73Show/hide
Query:  LTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLKDKLVIDRSTVER
        L   A +W +F+KS L+ TTH  +V+K+RVLLL  +L   SI+V Q+IHREI  Y  +K   LFFP+LIT++C     P L  EE L +   ID   V R
Subjt:  LTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLKDKLVIDRSTVER

Query:  LMNQEP---------TRRGAVQNVAINEMMAQLAKMQKQLSRMQEAQ
        +  + P         +R  A  + + +E + QL  +++++S+ +  Q
Subjt:  LMNQEP---------TRRGAVQNVAINEMMAQLAKMQKQLSRMQEAQ

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]3.5e-1234.55Show/hide
Query:  LTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLKDKLVIDRSTVER
        LT  A +W +F+KS L+ TTH   V+KDR+LLL  +L   SI+V ++IH EI     +K   LFFP+LIT+LC  R+ P L  EE L +   ID   V R
Subjt:  LTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLKDKLVIDRSTVER

Query:  LMNQEPT---------RRGAVQNVAIN-EMMAQLAKMQKQLSRMQ---EAQSASIKKAKKRDASILAALEHFKVAAPFPSAVPTRLKELLE
        +  + PT         R  A  +   N +++ QL  ++++LS+ +   + Q      +K+RD ++  AL++     P P+  P   +E+L+
Subjt:  LMNQEPT---------RRGAVQNVAIN-EMMAQLAKMQKQLSRMQ---EAQSASIKKAKKRDASILAALEHFKVAAPFPSAVPTRLKELLE

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)4.4e-1343.93Show/hide
Query:  LTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLKDKLVIDRSTVER
        LT  A +W +F+KS L+ TTH  +V+KDR+LLL  +L   SI+V ++IH EI     +K   LFFP+LIT+LC     P L  EE L +   ID   V R
Subjt:  LTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLKDKLVIDRSTVER

Query:  LMNQEPT
        +  + PT
Subjt:  LMNQEPT

A0A2P5BCG4 Uncharacterized protein (Fragment)1.1e-1133.5Show/hide
Query:  LTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLKDKLVIDRSTVER
        LT  A +W +F+KS L+ TTH  +V+KDR+LLL  +L   SI+V ++IH EI     +K   LFFP+LIT+LC     P L  EE L +   ID   V R
Subjt:  LTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLKDKLVIDRSTVER

Query:  LMNQEPTR----------RGAVQNVAINEMMAQLAKMQKQLSRMQEAQSASIKK---------------AKKRDASILAALE-HFKVAAP-FPSAVPTRL
        +  + PT             A  N    +++ QL  ++++LS+ QE Q   +                 +K+RD ++  AL+ +F    P FP+     L
Subjt:  LMNQEPTR----------RGAVQNVAINEMMAQLAKMQKQLSRMQEAQSASIKK---------------AKKRDASILAALE-HFKVAAP-FPSAVPTRL

Query:  KEL
        K+L
Subjt:  KEL

A0A2P5CEY2 Uncharacterized protein1.7e-1234.3Show/hide
Query:  KSGELTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLK-----DKL
        + G LT  A +W +F+KS L+ TTH  +V+KDR+LLL  +L   SI+V ++IH EI     +K   LFFP+LIT+LC     P L  EE L      D +
Subjt:  KSGELTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLK-----DKL

Query:  VIDRSTVE---RLMNQEPTRRGAV--QNVAINEMMAQLAKMQKQLSRMQEAQSASIKK---------------AKKRDASILAALEHFKVAAPFPSAVPT
         + R T E    L  Q  T R  V   + A  +++ QL  ++++LS+ QE Q   +                 +K+RD ++  AL++     P P+  PT
Subjt:  VIDRSTVE---RLMNQEPTRRGAV--QNVAINEMMAQLAKMQKQLSRMQEAQSASIKK---------------AKKRDASILAALEHFKVAAPFPSAVPT

Query:  RLKELLE
          +ELL+
Subjt:  RLKELLE

A0A2P5CPE8 Uncharacterized protein1.8e-1436.73Show/hide
Query:  LTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLKDKLVIDRSTVER
        L   A +W +F+KS L+ TTH  +V+K+RVLLL  +L   SI+V Q+IHREI  Y  +K   LFFP+LIT++C     P L  EE L +   ID   V R
Subjt:  LTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLKDKLVIDRSTVER

Query:  LMNQEP---------TRRGAVQNVAINEMMAQLAKMQKQLSRMQEAQ
        +  + P         +R  A  + + +E + QL  +++++S+ +  Q
Subjt:  LMNQEP---------TRRGAVQNVAINEMMAQLAKMQKQLSRMQEAQ

A0A2P5DXM3 Uncharacterized protein1.7e-1234.55Show/hide
Query:  LTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLKDKLVIDRSTVER
        LT  A +W +F+KS L+ TTH   V+KDR+LLL  +L   SI+V ++IH EI     +K   LFFP+LIT+LC  R+ P L  EE L +   ID   V R
Subjt:  LTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLKDKLVIDRSTVER

Query:  LMNQEPT---------RRGAVQNVAIN-EMMAQLAKMQKQLSRMQ---EAQSASIKKAKKRDASILAALEHFKVAAPFPSAVPTRLKELLE
        +  + PT         R  A  +   N +++ QL  ++++LS+ +   + Q      +K+RD ++  AL++     P P+  P   +E+L+
Subjt:  LMNQEPT---------RRGAVQNVAIN-EMMAQLAKMQKQLSRMQ---EAQSASIKKAKKRDASILAALEHFKVAAPFPSAVPTRLKELLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTGGTGAACTCACAAGGGAAGCCAACATTTGGCTCTACTTCGTCAAGAGCTGGCTCATGCATACCACGCATGATTCATCTGTTACGAAGGATAGAGTCCTTCT
GTTGACTTGCATTTTGGAAGATCACTCTATCGATGTAAGACAGCTTATCCACCGGGAGATCGTTCAGTACGTAACGAAGAAAATCGACCGCCTGTTTTTCCCCAACCTTA
TCACCAAACTCTGCCTTCGCAGAGATGTGCCCATCCTGGATGAAGAAGAGCCCCTCAAGGACAAGTTGGTGATAGATAGGAGTACGGTGGAAAGGCTGATGAACCAGGAA
CCTACCCGTCGTGGAGCTGTTCAGAATGTGGCCATCAATGAAATGATGGCCCAGCTTGCAAAAATGCAAAAGCAGCTCTCACGAATGCAGGAGGCGCAGTCCGCATCTAT
TAAGAAGGCTAAGAAGAGAGATGCGAGTATCCTGGCAGCACTGGAGCATTTTAAAGTAGCAGCCCCATTCCCATCCGCTGTGCCGACCCGTCTGAAAGAATTGCTGGAGC
AATCCGGAAGCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCTGGTGAACTCACAAGGGAAGCCAACATTTGGCTCTACTTCGTCAAGAGCTGGCTCATGCATACCACGCATGATTCATCTGTTACGAAGGATAGAGTCCTTCT
GTTGACTTGCATTTTGGAAGATCACTCTATCGATGTAAGACAGCTTATCCACCGGGAGATCGTTCAGTACGTAACGAAGAAAATCGACCGCCTGTTTTTCCCCAACCTTA
TCACCAAACTCTGCCTTCGCAGAGATGTGCCCATCCTGGATGAAGAAGAGCCCCTCAAGGACAAGTTGGTGATAGATAGGAGTACGGTGGAAAGGCTGATGAACCAGGAA
CCTACCCGTCGTGGAGCTGTTCAGAATGTGGCCATCAATGAAATGATGGCCCAGCTTGCAAAAATGCAAAAGCAGCTCTCACGAATGCAGGAGGCGCAGTCCGCATCTAT
TAAGAAGGCTAAGAAGAGAGATGCGAGTATCCTGGCAGCACTGGAGCATTTTAAAGTAGCAGCCCCATTCCCATCCGCTGTGCCGACCCGTCTGAAAGAATTGCTGGAGC
AATCCGGAAGCTCTTAA
Protein sequenceShow/hide protein sequence
MKSGELTREANIWLYFVKSWLMHTTHDSSVTKDRVLLLTCILEDHSIDVRQLIHREIVQYVTKKIDRLFFPNLITKLCLRRDVPILDEEEPLKDKLVIDRSTVERLMNQE
PTRRGAVQNVAINEMMAQLAKMQKQLSRMQEAQSASIKKAKKRDASILAALEHFKVAAPFPSAVPTRLKELLEQSGSS