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Moc07g03400 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g03400
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr7:2969127..2970469
RNA-Seq ExpressionMoc07g03400
SyntenyMoc07g03400
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149029.1 uncharacterized protein LOC111017548 [Momordica charantia]1.7e-5872.88Show/hide
Query:  LKPKSIDSYQQLRMLFIKQFSTRQLLKLPPSHLGTVKQWDNESLTEYIAQFLDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARL
        LKP+SIDSYQQLR LFI QFS RQLLKLPPSHL TVKQ DNESLTEYIA+ +DEHVKVV CT++IAMMYF T LN+RNLTIEFGSRPPASLNKMLARAR 
Subjt:  LKPKSIDSYQQLRMLFIKQFSTRQLLKLPPSHLGTVKQWDNESLTEYIAQFLDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARL

Query:  YIDGLELCKANRARRSSRSKDKDSKSPSSKKRHDDDRRSSRRTSDDKHGDRRDDKSSSDRRGPRFDKLPTLNASIVE
        YIDGLEL KA  ARRSSR KD+D +S   KKRH DD+ SSR+  DD+   + D++ SSDR GP+FDK   LNAS+ E
Subjt:  YIDGLELCKANRARRSSRSKDKDSKSPSSKKRHDDDRRSSRRTSDDKHGDRRDDKSSSDRRGPRFDKLPTLNASIVE

XP_022152851.1 uncharacterized protein LOC111020475 [Momordica charantia]4.9e-3776.11Show/hide
Query:  LKPKSIDSYQQLRMLFIKQFSTRQLLKLPPSHLGTVKQWDNESLTEYIAQFLDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARL
        LK +SIDSYQQLR LFI QFSTRQ LKLP SHLGTVKQ DNES T YIA+F+DEHVKVV CT++IAMMYF T LN+RNLTIEFGS  PA LN+M ARAR 
Subjt:  LKPKSIDSYQQLRMLFIKQFSTRQLLKLPPSHLGTVKQWDNESLTEYIAQFLDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARL

Query:  YIDGLELCKANRA
        YIDGLEL  A+ A
Subjt:  YIDGLELCKANRA

XP_022156001.1 uncharacterized protein LOC111022976 [Momordica charantia]7.8e-2748.47Show/hide
Query:  LFIKQFSTRQLLKLPPSHLGTVKQWDNESLTEYIAQFLDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARLYIDGLELCKANRAR
        +FI Q S  QLLKLP SHLGT+KQ D ESLT+YI +F+DEHVKV+ CT+E+A++YF T L  RNL ++  S+P    N++L  A  YIDGLEL +AN  +
Subjt:  LFIKQFSTRQLLKLPPSHLGTVKQWDNESLTEYIAQFLDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARLYIDGLELCKANRAR

Query:  RSSRSKDKDSKSPSSKKRHDDDRRSSRRTSDDKHGDRRDDKSSSDRRGPRFDKLPTLNASIVE
        R S   DK     S KKR DD  R+S R  ++K  ++R D  +  +  P+FDK    N  I E
Subjt:  RSSRSKDKDSKSPSSKKRHDDDRRSSRRTSDDKHGDRRDDKSSSDRRGPRFDKLPTLNASIVE

XP_022158844.1 uncharacterized protein LOC111025310 [Momordica charantia]2.4e-3672.22Show/hide
Query:  LDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARLYIDGLELCKANRARRSSRSKDKDSKSPSSKKRHDDDRRSSRRTSDDKHGDR
        +DEHVKVV CT++IAMMYF T LN+RNLTIEF SRPPASLN+M ARAR YIDGLEL KAN ARRSSR +D+D KSP SKKR DDDR SSRR  DDK   R
Subjt:  LDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARLYIDGLELCKANRARRSSRSKDKDSKSPSSKKRHDDDRRSSRRTSDDKHGDR

Query:  RDDKSSSDRRGPRFDKLPTLNASIVE
        RD++ +S+RRGP+FDK   LNASI E
Subjt:  RDDKSSSDRRGPRFDKLPTLNASIVE

XP_022159250.1 uncharacterized protein LOC111025663 [Momordica charantia]9.6e-1739.16Show/hide
Query:  LKPKSIDSYQQLRMLFIKQFSTRQLLKLPPSHLGTVKQWDNESLTEYIAQFLDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARL
        L  +SI +Y QLR  FI QFS+R   +   +HL T++Q + E+L EY+ +FL+E +KV  C+++ AM YF+T L + NLT++ G   PA+  ++L +A+ 
Subjt:  LKPKSIDSYQQLRMLFIKQFSTRQLLKLPPSHLGTVKQWDNESLTEYIAQFLDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARL

Query:  YIDGLELC--------------KANRARRSSRSKDKDSKSPSS
         IDG EL               K N+ +R + SK KD  S SS
Subjt:  YIDGLELC--------------KANRARRSSRSKDKDSKSPSS

TrEMBL top hitse value%identityAlignment
A0A6J1D5T3 uncharacterized protein LOC1110175488.3e-5972.88Show/hide
Query:  LKPKSIDSYQQLRMLFIKQFSTRQLLKLPPSHLGTVKQWDNESLTEYIAQFLDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARL
        LKP+SIDSYQQLR LFI QFS RQLLKLPPSHL TVKQ DNESLTEYIA+ +DEHVKVV CT++IAMMYF T LN+RNLTIEFGSRPPASLNKMLARAR 
Subjt:  LKPKSIDSYQQLRMLFIKQFSTRQLLKLPPSHLGTVKQWDNESLTEYIAQFLDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARL

Query:  YIDGLELCKANRARRSSRSKDKDSKSPSSKKRHDDDRRSSRRTSDDKHGDRRDDKSSSDRRGPRFDKLPTLNASIVE
        YIDGLEL KA  ARRSSR KD+D +S   KKRH DD+ SSR+  DD+   + D++ SSDR GP+FDK   LNAS+ E
Subjt:  YIDGLELCKANRARRSSRSKDKDSKSPSSKKRHDDDRRSSRRTSDDKHGDRRDDKSSSDRRGPRFDKLPTLNASIVE

A0A6J1DIZ8 uncharacterized protein LOC1110204752.4e-3776.11Show/hide
Query:  LKPKSIDSYQQLRMLFIKQFSTRQLLKLPPSHLGTVKQWDNESLTEYIAQFLDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARL
        LK +SIDSYQQLR LFI QFSTRQ LKLP SHLGTVKQ DNES T YIA+F+DEHVKVV CT++IAMMYF T LN+RNLTIEFGS  PA LN+M ARAR 
Subjt:  LKPKSIDSYQQLRMLFIKQFSTRQLLKLPPSHLGTVKQWDNESLTEYIAQFLDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARL

Query:  YIDGLELCKANRA
        YIDGLEL  A+ A
Subjt:  YIDGLELCKANRA

A0A6J1DTI2 uncharacterized protein LOC1110229763.8e-2748.47Show/hide
Query:  LFIKQFSTRQLLKLPPSHLGTVKQWDNESLTEYIAQFLDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARLYIDGLELCKANRAR
        +FI Q S  QLLKLP SHLGT+KQ D ESLT+YI +F+DEHVKV+ CT+E+A++YF T L  RNL ++  S+P    N++L  A  YIDGLEL +AN  +
Subjt:  LFIKQFSTRQLLKLPPSHLGTVKQWDNESLTEYIAQFLDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARLYIDGLELCKANRAR

Query:  RSSRSKDKDSKSPSSKKRHDDDRRSSRRTSDDKHGDRRDDKSSSDRRGPRFDKLPTLNASIVE
        R S   DK     S KKR DD  R+S R  ++K  ++R D  +  +  P+FDK    N  I E
Subjt:  RSSRSKDKDSKSPSSKKRHDDDRRSSRRTSDDKHGDRRDDKSSSDRRGPRFDKLPTLNASIVE

A0A6J1DY58 uncharacterized protein LOC1110256634.6e-1739.16Show/hide
Query:  LKPKSIDSYQQLRMLFIKQFSTRQLLKLPPSHLGTVKQWDNESLTEYIAQFLDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARL
        L  +SI +Y QLR  FI QFS+R   +   +HL T++Q + E+L EY+ +FL+E +KV  C+++ AM YF+T L + NLT++ G   PA+  ++L +A+ 
Subjt:  LKPKSIDSYQQLRMLFIKQFSTRQLLKLPPSHLGTVKQWDNESLTEYIAQFLDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARL

Query:  YIDGLELC--------------KANRARRSSRSKDKDSKSPSS
         IDG EL               K N+ +R + SK KD  S SS
Subjt:  YIDGLELC--------------KANRARRSSRSKDKDSKSPSS

A0A6J1E0L8 uncharacterized protein LOC1110253101.2e-3672.22Show/hide
Query:  LDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARLYIDGLELCKANRARRSSRSKDKDSKSPSSKKRHDDDRRSSRRTSDDKHGDR
        +DEHVKVV CT++IAMMYF T LN+RNLTIEF SRPPASLN+M ARAR YIDGLEL KAN ARRSSR +D+D KSP SKKR DDDR SSRR  DDK   R
Subjt:  LDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARLYIDGLELCKANRARRSSRSKDKDSKSPSSKKRHDDDRRSSRRTSDDKHGDR

Query:  RDDKSSSDRRGPRFDKLPTLNASIVE
        RD++ +S+RRGP+FDK   LNASI E
Subjt:  RDDKSSSDRRGPRFDKLPTLNASIVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCGGTTCTGGACAATGCTATAGGTCAAGAATACCGGCTTGACGCACAAAGGGAGAGAAGTTTGGAGGTGAATGATCGGCAGAAGTCCTCTCAAGGAGACCACGA
CATCCGATCCGAAGTGGATCACCTCCACGATCAATTCAAGAGGGAGATAAAGGACCTCAAGAAGCAGCGCAAACCTTTAGATCCGCATCGGGCGATCGAGCAGGAACAGC
CCCCTTTCTCCCAGGCGATCTTGGAAGCACTATCCCGTCGAAATTTAAAGCTTGTACAATGGGTTTGGAGATCCGGTGTCTTGAAGCCGAAGTCGATTGACAGTTATCAA
CAGTTGCGAATGTTGTTCATTAAGCAGTTCTCGACTAGGCAGTTGTTGAAACTACCACCATCCCACCTAGGAACTGTGAAGCAATGGGACAATGAGTCTCTTACAGAGTA
CATCGCCCAGTTTCTGGACGAGCATGTTAAAGTGGTGAAATGCACTGAGGAAATCGCTATGATGTATTTTATGACAAGGTTAAATAACCGAAACTTGACGATCGAGTTCG
GGAGTCGTCCACCGGCCTCTTTGAACAAGATGCTCGCCAGAGCTCGTCTGTATATTGATGGGCTAGAGTTGTGCAAGGCCAACAGAGCCAGGCGCAGCAGTCGCAGCAAA
GACAAAGACTCTAAGTCTCCGTCTTCTAAGAAACGGCACGATGATGACCGAAGATCGTCTCGACGAACCAGTGATGATAAGCATGGAGACCGACGAGATGACAAGAGCTC
CTCAGATCGGCGTGGGCCAAGGTTTGACAAGCTTCCTACGCTGAATGCCTCAATTGTTGAATGCCTCAATCGCAGTCGAAGATACCGACCTAGAGACGCTATTCGCATCA
CTCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCGGTTCTGGACAATGCTATAGGTCAAGAATACCGGCTTGACGCACAAAGGGAGAGAAGTTTGGAGGTGAATGATCGGCAGAAGTCCTCTCAAGGAGACCACGA
CATCCGATCCGAAGTGGATCACCTCCACGATCAATTCAAGAGGGAGATAAAGGACCTCAAGAAGCAGCGCAAACCTTTAGATCCGCATCGGGCGATCGAGCAGGAACAGC
CCCCTTTCTCCCAGGCGATCTTGGAAGCACTATCCCGTCGAAATTTAAAGCTTGTACAATGGGTTTGGAGATCCGGTGTCTTGAAGCCGAAGTCGATTGACAGTTATCAA
CAGTTGCGAATGTTGTTCATTAAGCAGTTCTCGACTAGGCAGTTGTTGAAACTACCACCATCCCACCTAGGAACTGTGAAGCAATGGGACAATGAGTCTCTTACAGAGTA
CATCGCCCAGTTTCTGGACGAGCATGTTAAAGTGGTGAAATGCACTGAGGAAATCGCTATGATGTATTTTATGACAAGGTTAAATAACCGAAACTTGACGATCGAGTTCG
GGAGTCGTCCACCGGCCTCTTTGAACAAGATGCTCGCCAGAGCTCGTCTGTATATTGATGGGCTAGAGTTGTGCAAGGCCAACAGAGCCAGGCGCAGCAGTCGCAGCAAA
GACAAAGACTCTAAGTCTCCGTCTTCTAAGAAACGGCACGATGATGACCGAAGATCGTCTCGACGAACCAGTGATGATAAGCATGGAGACCGACGAGATGACAAGAGCTC
CTCAGATCGGCGTGGGCCAAGGTTTGACAAGCTTCCTACGCTGAATGCCTCAATTGTTGAATGCCTCAATCGCAGTCGAAGATACCGACCTAGAGACGCTATTCGCATCA
CTCGATAA
Protein sequenceShow/hide protein sequence
MVSVLDNAIGQEYRLDAQRERSLEVNDRQKSSQGDHDIRSEVDHLHDQFKREIKDLKKQRKPLDPHRAIEQEQPPFSQAILEALSRRNLKLVQWVWRSGVLKPKSIDSYQ
QLRMLFIKQFSTRQLLKLPPSHLGTVKQWDNESLTEYIAQFLDEHVKVVKCTEEIAMMYFMTRLNNRNLTIEFGSRPPASLNKMLARARLYIDGLELCKANRARRSSRSK
DKDSKSPSSKKRHDDDRRSSRRTSDDKHGDRRDDKSSSDRRGPRFDKLPTLNASIVECLNRSRRYRPRDAIRITR